RNA–Protein interactions for RNA: ENST00000473643.1

SMG5-203, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 541 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-203ENST00000473643 KSR2Q6VAB6 950 aa11.56□□□□□ -0.56
SMG5-203ENST00000473643 KIF6Q6ZMV9 814 aa11.56□□□□□ -0.56
SMG5-203ENST00000473643 ANKRD13DQ6ZTN6 518 aa11.56□□□□□ -0.56
SMG5-203ENST00000473643 ZNF34Q8IZ26 560 aa11.56□□□□□ -0.56
SMG5-203ENST00000473643 PLBD2Q8NHP8 589 aa11.56□□□□□ -0.56
SMG5-203ENST00000473643 FRAT1Q92837 279 aaPredicted RBP11.56□□□□□ -0.56
SMG5-203ENST00000473643 AFDNP55196 1824 aaKnown RBP11.56□□□□□ -0.56
SMG5-203ENST00000473643 SCN7AQ01118 1682 aa11.55□□□□□ -0.56
SMG5-203ENST00000473643 PI4KAP2A4QPH2 592 aa11.55□□□□□ -0.56
SMG5-203ENST00000473643 NPHP1O15259 732 aa11.55□□□□□ -0.56
SMG5-203ENST00000473643 DDX58O95786 925 aaKnown RBP11.55□□□□□ -0.56
SMG5-203ENST00000473643 C1QTNF8P60827 252 aa11.55□□□□□ -0.56
SMG5-203ENST00000473643 FKBP5Q13451 457 aaPredicted RBP11.55□□□□□ -0.56
SMG5-203ENST00000473643 C9orf131Q5VYM1 1079 aa11.55□□□□□ -0.56
SMG5-203ENST00000473643 GIGYF2Q6Y7W6 1299 aaKnown RBP11.55□□□□□ -0.56
SMG5-203ENST00000473643 PI4KAP1Q8N8J0 262 aa11.55□□□□□ -0.56
SMG5-203ENST00000473643 ZNF622Q969S3 477 aaKnown RBP eCLIP11.55□□□□□ -0.56
SMG5-203ENST00000473643 MASTLQ96GX5 879 aa11.55□□□□□ -0.56
SMG5-203ENST00000473643 ZBTB3Q9H5J0 574 aa11.55□□□□□ -0.56
SMG5-203ENST00000473643 GPBP1L1Q9HC44 474 aaPredicted RBP11.55□□□□□ -0.56
SMG5-203ENST00000473643 BRCA1P38398 1863 aaKnown RBP11.55□□□□□ -0.56
SMG5-203ENST00000473643 PLIN1O60240 522 aa11.54□□□□□ -0.56
SMG5-203ENST00000473643 AIMP1Q12904 312 aaKnown RBP11.54□□□□□ -0.56
SMG5-203ENST00000473643 CNKSR1Q969H4 720 aa11.54□□□□□ -0.56
SMG5-203ENST00000473643 NYXQ9GZU5 481 aa11.54□□□□□ -0.56
SMG5-203ENST00000473643 ABCC4O15439 1325 aa11.54□□□□□ -0.56
SMG5-203ENST00000473643 FAM177BA6PVY3 158 aa11.53□□□□□ -0.56
SMG5-203ENST00000473643 PRELPP51888 382 aa11.53□□□□□ -0.56
SMG5-203ENST00000473643 SUSD4Q5VX71 490 aa11.53□□□□□ -0.56
SMG5-203ENST00000473643 INTS3Q68E01 1043 aaKnown RBP11.53□□□□□ -0.56
SMG5-203ENST00000473643 RIC3Q7Z5B4 369 aa11.53□□□□□ -0.56
SMG5-203ENST00000473643 DZIP1LQ8IYY4 767 aaKnown RBP11.53□□□□□ -0.56
SMG5-203ENST00000473643 C7orf43Q8WVR3 580 aa11.53□□□□□ -0.56
SMG5-203ENST00000473643 DNAAF4Q8WXU2 420 aa11.53□□□□□ -0.56
SMG5-203ENST00000473643 IBTKQ9P2D0 1353 aaPredicted RBP11.53□□□□□ -0.56
SMG5-203ENST00000473643 NFKBIEO00221 500 aa11.52□□□□□ -0.57
SMG5-203ENST00000473643 C21orf2O43822 256 aa11.52□□□□□ -0.57
SMG5-203ENST00000473643 NPR1P16066 1061 aa11.52□□□□□ -0.57
SMG5-203ENST00000473643 LMNB1P20700 586 aa11.52□□□□□ -0.57
SMG5-203ENST00000473643 GPTP24298 496 aa11.52□□□□□ -0.57
SMG5-203ENST00000473643 GTF2E1P29083 439 aaPredicted RBP11.52□□□□□ -0.57
SMG5-203ENST00000473643 TRIM28Q13263 835 aaKnown RBP11.52□□□□□ -0.57
SMG5-203ENST00000473643 CRY2Q49AN0 593 aa11.52□□□□□ -0.57
SMG5-203ENST00000473643 PARP10Q53GL7 1025 aa11.52□□□□□ -0.57
SMG5-203ENST00000473643 PRPF40BQ6NWY9 871 aaKnown RBP11.52□□□□□ -0.57
SMG5-203ENST00000473643 ZNF526Q8TF50 670 aaPredicted RBP11.52□□□□□ -0.57
SMG5-203ENST00000473643 METTL22Q9BUU2 404 aaPredicted RBP11.52□□□□□ -0.57
SMG5-203ENST00000473643 RNF181Q9P0P0 153 aa11.52□□□□□ -0.57
SMG5-203ENST00000473643 TNNQ9UQP3 1299 aa11.52□□□□□ -0.57
SMG5-203ENST00000473643 MAP3K2Q9Y2U5 619 aa11.52□□□□□ -0.57
SMG5-203ENST00000473643 UBN2Q6ZU65 1347 aa11.52□□□□□ -0.57
SMG5-203ENST00000473643 CACNA1FO60840 1977 aa11.52□□□□□ -0.57
SMG5-203ENST00000473643 BCORQ6W2J9 1755 aa11.51□□□□□ -0.57
SMG5-203ENST00000473643 F6X3S4 739 aa11.51□□□□□ -0.57
SMG5-203ENST00000473643 RLBP1P12271 317 aa11.51□□□□□ -0.57
SMG5-203ENST00000473643 CCT4P50991 539 aaKnown RBP11.51□□□□□ -0.57
SMG5-203ENST00000473643 TCIRG1Q13488 830 aa11.51□□□□□ -0.57
SMG5-203ENST00000473643 ERFEQ4G0M1 354 aa11.51□□□□□ -0.57
SMG5-203ENST00000473643 HSP90AB3PQ58FF7 597 aa11.51□□□□□ -0.57
SMG5-203ENST00000473643 SLC10A5Q5PT55 438 aa11.51□□□□□ -0.57
SMG5-203ENST00000473643 BEND3Q5T5X7 828 aa11.51□□□□□ -0.57
SMG5-203ENST00000473643 C20orf194Q5TEA3 1177 aa11.51□□□□□ -0.57
SMG5-203ENST00000473643 NUTM1Q86Y26 1132 aa11.51□□□□□ -0.57
SMG5-203ENST00000473643 CLUAP1Q96AJ1 413 aa11.51□□□□□ -0.57
SMG5-203ENST00000473643 ARFGEF1Q9Y6D6 1849 aa11.51□□□□□ -0.57
SMG5-203ENST00000473643 KIF3CO14782 793 aa11.5□□□□□ -0.57
SMG5-203ENST00000473643 ALDH1L1O75891 902 aa11.5□□□□□ -0.57
SMG5-203ENST00000473643 NTSR2O95665 410 aa11.5□□□□□ -0.57
SMG5-203ENST00000473643 ALDH1B1P30837 517 aa11.5□□□□□ -0.57
SMG5-203ENST00000473643 HOXA10P31260 410 aaPredicted RBP11.5□□□□□ -0.57
SMG5-203ENST00000473643 RASSF7Q02833 373 aa11.5□□□□□ -0.57
SMG5-203ENST00000473643 SOGA3Q5TF21 947 aa11.5□□□□□ -0.57
SMG5-203ENST00000473643 PPP1R42Q7Z4L9 355 aa11.5□□□□□ -0.57
SMG5-203ENST00000473643 FTSJ3Q8IY81 847 aaKnown RBP11.5□□□□□ -0.57
SMG5-203ENST00000473643 TMEM57Q8N5G2 664 aa11.5□□□□□ -0.57
SMG5-203ENST00000473643 LINS1Q8NG48 757 aa11.5□□□□□ -0.57
SMG5-203ENST00000473643 PANK1Q8TE04 598 aa11.5□□□□□ -0.57
SMG5-203ENST00000473643 ISCA1Q9BUE6 129 aa11.5□□□□□ -0.57
SMG5-203ENST00000473643 ZC3H4Q9UPT8 1303 aaKnown RBP11.5□□□□□ -0.57
SMG5-203ENST00000473643 ANKRD31Q8N7Z5 1873 aa11.5□□□□□ -0.57
SMG5-203ENST00000473643 IGKV5-2P06315 115 aa11.49□□□□□ -0.57
SMG5-203ENST00000473643 NEXNQ0ZGT2 675 aa11.49□□□□□ -0.57
SMG5-203ENST00000473643 MVPQ14764 893 aaKnown RBP11.49□□□□□ -0.57
SMG5-203ENST00000473643 NLRP10Q86W26 655 aa11.49□□□□□ -0.57
SMG5-203ENST00000473643 UTP14AQ9BVJ6 771 aaKnown RBP11.49□□□□□ -0.57
SMG5-203ENST00000473643 ZNF219Q9P2Y4 722 aaPredicted RBP11.49□□□□□ -0.57
SMG5-203ENST00000473643 ABCC12Q96J65 1359 aa11.49□□□□□ -0.57
SMG5-203ENST00000473643 CEP350Q5VT06 3117 aa11.48□□□□□ -0.57
SMG5-203ENST00000473643 NEURL1BA8MQ27 555 aa11.48□□□□□ -0.57
SMG5-203ENST00000473643 SLC4A10Q6U841 1118 aa11.48□□□□□ -0.57
SMG5-203ENST00000473643 MYD88Q99836 296 aa11.48□□□□□ -0.57
SMG5-203ENST00000473643 SRCIN1Q9C0H9 1055 aa11.48□□□□□ -0.57
SMG5-203ENST00000473643 LTBP3Q9NS15 1303 aa11.48□□□□□ -0.57
SMG5-203ENST00000473643 RIC1Q4ADV7 1423 aa11.48□□□□□ -0.57
SMG5-203ENST00000473643 DLEC1Q9Y238 1755 aa11.48□□□□□ -0.57
SMG5-203ENST00000473643 KDM2BQ8NHM5 1336 aa11.47□□□□□ -0.57
SMG5-203ENST00000473643 ZBTB7BO15156 539 aaPredicted RBP11.47□□□□□ -0.57
SMG5-203ENST00000473643 C3orf67Q6ZVT6 689 aa11.47□□□□□ -0.57
SMG5-203ENST00000473643 CCDC191Q8NCU4 936 aa11.47□□□□□ -0.57
SMG5-203ENST00000473643 NLRP3Q96P20 1036 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms