RNA–Protein interactions for RNA: ENST00000473522.1

RPUSD3-214, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-214ENST00000473522 PI4KAP1Q8N8J0 262 aa22.68■■□□□ 1.22
RPUSD3-214ENST00000473522 ATP5J2-PTCD1G3V325 749 aa22.67■■□□□ 1.22
RPUSD3-214ENST00000473522 ZNF428Q96B54 188 aa22.67■■□□□ 1.22
RPUSD3-214ENST00000473522 NPR1P16066 1061 aa22.66■■□□□ 1.22
RPUSD3-214ENST00000473522 CNKSR1Q969H4 720 aa22.66■■□□□ 1.22
RPUSD3-214ENST00000473522 ZNF622Q969S3 477 aaKnown RBP eCLIP22.66■■□□□ 1.22
RPUSD3-214ENST00000473522 TRMT112Q9UI30 125 aaKnown RBP22.66■■□□□ 1.22
RPUSD3-214ENST00000473522 MAP3K2Q9Y2U5 619 aa22.66■■□□□ 1.22
RPUSD3-214ENST00000473522 RIC1Q4ADV7 1423 aa22.65■■□□□ 1.22
RPUSD3-214ENST00000473522 KIAA1551Q9HCM1 1747 aa22.65■■□□□ 1.22
RPUSD3-214ENST00000473522 CCDC191Q8NCU4 936 aa22.65■■□□□ 1.22
RPUSD3-214ENST00000473522 ABCC12Q96J65 1359 aa22.64■■□□□ 1.22
RPUSD3-214ENST00000473522 SH3TC1Q8TE82 1336 aa22.64■■□□□ 1.22
RPUSD3-214ENST00000473522 CT47B1P0C2W7 299 aaPredicted RBP22.64■■□□□ 1.21
RPUSD3-214ENST00000473522 HOXA10P31260 410 aaPredicted RBP22.64■■□□□ 1.21
RPUSD3-214ENST00000473522 HNRNPUQ00839 825 aaKnown RBP eCLIP22.64■■□□□ 1.21
RPUSD3-214ENST00000473522 NLRP3Q96P20 1036 aa22.64■■□□□ 1.21
RPUSD3-214ENST00000473522 MYD88Q99836 296 aa22.64■■□□□ 1.21
RPUSD3-214ENST00000473522 AFDNP55196 1824 aaKnown RBP22.64■■□□□ 1.21
RPUSD3-214ENST00000473522 ADCY9O60503 1353 aa22.63■■□□□ 1.21
RPUSD3-214ENST00000473522 SYNE4Q8N205 404 aa22.63■■□□□ 1.21
RPUSD3-214ENST00000473522 IGKV5-2P06315 115 aa22.62■■□□□ 1.21
RPUSD3-214ENST00000473522 ALDH1B1P30837 517 aa22.62■■□□□ 1.21
RPUSD3-214ENST00000473522 ARHGAP27Q6ZUM4 889 aa22.62■■□□□ 1.21
RPUSD3-214ENST00000473522 C7orf43Q8WVR3 580 aa22.62■■□□□ 1.21
RPUSD3-214ENST00000473522 YY1P25490 414 aa22.61■■□□□ 1.21
RPUSD3-214ENST00000473522 FKBP5Q13451 457 aaPredicted RBP22.61■■□□□ 1.21
RPUSD3-214ENST00000473522 C3orf67Q6ZVT6 689 aa22.61■■□□□ 1.21
RPUSD3-214ENST00000473522 ZBTB38Q8NAP3 1195 aaPredicted RBP22.61■■□□□ 1.21
RPUSD3-214ENST00000473522 FAM89AQ96GI7 184 aa22.61■■□□□ 1.21
RPUSD3-214ENST00000473522 ALDH1L2Q3SY69 923 aa22.6■■□□□ 1.21
RPUSD3-214ENST00000473522 MRPL50Q8N5N7 158 aaKnown RBP22.6■■□□□ 1.21
RPUSD3-214ENST00000473522 DNAAF4Q8WXU2 420 aa22.6■■□□□ 1.21
RPUSD3-214ENST00000473522 CWC25Q9NXE8 425 aaPredicted RBP22.6■■□□□ 1.21
RPUSD3-214ENST00000473522 HCLS1P14317 486 aaPredicted RBP22.59■■□□□ 1.21
RPUSD3-214ENST00000473522 NEXNQ0ZGT2 675 aa22.59■■□□□ 1.21
RPUSD3-214ENST00000473522 PRPF40BQ6NWY9 871 aaKnown RBP22.59■■□□□ 1.21
RPUSD3-214ENST00000473522 SSH1Q8WYL5 1049 aa22.59■■□□□ 1.21
RPUSD3-214ENST00000473522 CRAMP1Q96RY5 1269 aa22.59■■□□□ 1.21
RPUSD3-214ENST00000473522 NUP98P52948 1817 aa22.59■■□□□ 1.21
RPUSD3-214ENST00000473522 PCCAP05165 728 aaPredicted RBP22.58■■□□□ 1.21
RPUSD3-214ENST00000473522 C21orf2O43822 256 aa22.57■■□□□ 1.2
RPUSD3-214ENST00000473522 SF3B3Q15393 1217 aaKnown RBP22.57■■□□□ 1.2
RPUSD3-214ENST00000473522 LINS1Q8NG48 757 aa22.57■■□□□ 1.2
RPUSD3-214ENST00000473522 N4BP2Q86UW6 1770 aaPredicted RBP22.57■■□□□ 1.2
RPUSD3-214ENST00000473522 NEURL1BA8MQ27 555 aa22.56■■□□□ 1.2
RPUSD3-214ENST00000473522 IRS4O14654 1257 aaPredicted RBP22.56■■□□□ 1.2
RPUSD3-214ENST00000473522 BRPF1P55201 1214 aaPredicted RBP22.56■■□□□ 1.2
RPUSD3-214ENST00000473522 RPGRQ92834 1020 aaKnown RBP22.56■■□□□ 1.2
RPUSD3-214ENST00000473522 RBM17Q96I25 401 aaKnown RBP22.56■■□□□ 1.2
RPUSD3-214ENST00000473522 H7C1W4 665 aa22.55■■□□□ 1.2
RPUSD3-214ENST00000473522 HSP90B1P14625 803 aaKnown RBP22.55■■□□□ 1.2
RPUSD3-214ENST00000473522 BEND3Q5T5X7 828 aa22.55■■□□□ 1.2
RPUSD3-214ENST00000473522 SOGA3Q5TF21 947 aa22.55■■□□□ 1.2
RPUSD3-214ENST00000473522 ZBED9Q6R2W3 1325 aa22.55■■□□□ 1.2
RPUSD3-214ENST00000473522 CWF19L2Q2TBE0 894 aaKnown RBP22.54■■□□□ 1.2
RPUSD3-214ENST00000473522 ANKRD31Q8N7Z5 1873 aa22.54■■□□□ 1.2
RPUSD3-214ENST00000473522 F6X3S4 739 aa22.53■■□□□ 1.2
RPUSD3-214ENST00000473522 GCKRQ14397 625 aa22.53■■□□□ 1.2
RPUSD3-214ENST00000473522 NFKBIEO00221 500 aa22.52■■□□□ 1.2
RPUSD3-214ENST00000473522 BBOX1O75936 387 aa22.52■■□□□ 1.2
RPUSD3-214ENST00000473522 RTL5Q5HYW3 569 aaPredicted RBP22.52■■□□□ 1.2
RPUSD3-214ENST00000473522 CC2D2BQ6DHV5 1058 aa22.52■■□□□ 1.2
RPUSD3-214ENST00000473522 PTPRCP08575 1304 aa22.52■■□□□ 1.2
RPUSD3-214ENST00000473522 CDHR2Q9BYE9 1310 aa22.52■■□□□ 1.2
RPUSD3-214ENST00000473522 RARSP54136 660 aaKnown RBP22.51■■□□□ 1.19
RPUSD3-214ENST00000473522 ZNF219Q9P2Y4 722 aaPredicted RBP22.51■■□□□ 1.19
RPUSD3-214ENST00000473522 PDE8AO60658 829 aa22.5■■□□□ 1.19
RPUSD3-214ENST00000473522 DDX46Q7L014 1031 aaKnown RBP22.5■■□□□ 1.19
RPUSD3-214ENST00000473522 JARID2Q92833 1246 aaPredicted RBP22.5■■□□□ 1.19
RPUSD3-214ENST00000473522 LTBP3Q9NS15 1303 aa22.5■■□□□ 1.19
RPUSD3-214ENST00000473522 BRCA1P38398 1863 aaKnown RBP22.49■■□□□ 1.19
RPUSD3-214ENST00000473522 PRELPP51888 382 aa22.49■■□□□ 1.19
RPUSD3-214ENST00000473522 CASP7P55210 303 aa22.49■■□□□ 1.19
RPUSD3-214ENST00000473522 GRIPAP1Q4V328 841 aa22.49■■□□□ 1.19
RPUSD3-214ENST00000473522 CCDC93Q567U6 631 aa22.49■■□□□ 1.19
RPUSD3-214ENST00000473522 RTKN2Q8IZC4 609 aa22.49■■□□□ 1.19
RPUSD3-214ENST00000473522 SMC4Q9NTJ3 1288 aa22.49■■□□□ 1.19
RPUSD3-214ENST00000473522 ALDH1L1O75891 902 aa22.48■■□□□ 1.19
RPUSD3-214ENST00000473522 LMNB1P20700 586 aa22.48■■□□□ 1.19
RPUSD3-214ENST00000473522 GRAPQ13588 217 aa22.48■■□□□ 1.19
RPUSD3-214ENST00000473522 C9orf131Q5VYM1 1079 aa22.48■■□□□ 1.19
RPUSD3-214ENST00000473522 GRAPLQ8TC17 118 aaPredicted RBP22.48■■□□□ 1.19
RPUSD3-214ENST00000473522 BCL2L13Q9BXK5 485 aa22.48■■□□□ 1.19
RPUSD3-214ENST00000473522 ABCC4O15439 1325 aa22.48■■□□□ 1.19
RPUSD3-214ENST00000473522 OLFM4Q6UX06 510 aa22.47■■□□□ 1.19
RPUSD3-214ENST00000473522 ZNF784Q8NCA9 323 aaPredicted RBP22.47■■□□□ 1.19
RPUSD3-214ENST00000473522 PLA2G12BQ9BX93 195 aa22.47■■□□□ 1.19
RPUSD3-214ENST00000473522 ATP6V0A2Q9Y487 856 aa22.47■■□□□ 1.19
RPUSD3-214ENST00000473522 RASSF7Q02833 373 aa22.46■■□□□ 1.19
RPUSD3-214ENST00000473522 SP8Q8IXZ3 490 aa22.46■■□□□ 1.19
RPUSD3-214ENST00000473522 SRCIN1Q9C0H9 1055 aa22.46■■□□□ 1.19
RPUSD3-214ENST00000473522 TAOK3Q9H2K8 898 aa22.46■■□□□ 1.19
RPUSD3-214ENST00000473522 DLEC1Q9Y238 1755 aa22.45■■□□□ 1.19
RPUSD3-214ENST00000473522 PPEF1O14829 653 aaPredicted RBP22.45■■□□□ 1.18
RPUSD3-214ENST00000473522 FKBP4Q02790 459 aaKnown RBP eCLIP22.45■■□□□ 1.18
RPUSD3-214ENST00000473522 UBE3BQ7Z3V4 1068 aa22.45■■□□□ 1.18
RPUSD3-214ENST00000473522 TMC4Q7Z404 712 aa22.45■■□□□ 1.18
RPUSD3-214ENST00000473522 TTLL11Q8NHH1 800 aa22.45■■□□□ 1.18
RPUSD3-214ENST00000473522 ARHGAP45Q92619 1136 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms