RNA–Protein interactions for RNA: ENST00000473343.5

TNFRSF25-211, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 2

Gene TNFRSF25, Length 1,591 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-211ENST00000473343 NIP7Q9Y221 180 aaKnown RBP eCLIP23.82■■□□□ 1.4
TNFRSF25-211ENST00000473343 GYS1P13807 737 aa23.82■■□□□ 1.4
TNFRSF25-211ENST00000473343 PARP10Q53GL7 1025 aa23.81■■□□□ 1.4
TNFRSF25-211ENST00000473343 TBC1D9BQ66K14 1250 aa23.81■■□□□ 1.4
TNFRSF25-211ENST00000473343 ANKRD36CQ5JPF3 1778 aa23.81■■□□□ 1.4
TNFRSF25-211ENST00000473343 UBTFL1P0CB47 393 aaPredicted RBP23.8■■□□□ 1.4
TNFRSF25-211ENST00000473343 MSH5O43196 834 aa23.79■■□□□ 1.4
TNFRSF25-211ENST00000473343 H7C1W4 665 aa23.78■■□□□ 1.4
TNFRSF25-211ENST00000473343 GNAI2P04899 355 aa23.78■■□□□ 1.4
TNFRSF25-211ENST00000473343 C1orf115Q9H7X2 142 aa23.78■■□□□ 1.4
TNFRSF25-211ENST00000473343 AFDNP55196 1824 aaKnown RBP23.78■■□□□ 1.4
TNFRSF25-211ENST00000473343 QSER1Q2KHR3 1735 aa23.78■■□□□ 1.4
TNFRSF25-211ENST00000473343 CASP7P55210 303 aa23.78■■□□□ 1.4
TNFRSF25-211ENST00000473343 SUSD4Q5VX71 490 aa23.78■■□□□ 1.4
TNFRSF25-211ENST00000473343 ZBTB38Q8NAP3 1195 aaPredicted RBP23.78■■□□□ 1.4
TNFRSF25-211ENST00000473343 PCCAP05165 728 aaPredicted RBP23.77■■□□□ 1.4
TNFRSF25-211ENST00000473343 BICDL1Q6ZP65 573 aa23.77■■□□□ 1.4
TNFRSF25-211ENST00000473343 UBE3BQ7Z3V4 1068 aa23.77■■□□□ 1.4
TNFRSF25-211ENST00000473343 SETDB2Q96T68 719 aa23.77■■□□□ 1.4
TNFRSF25-211ENST00000473343 HDAC5Q9UQL6 1122 aa23.77■■□□□ 1.4
TNFRSF25-211ENST00000473343 PPP1R42Q7Z4L9 355 aa23.76■■□□□ 1.39
TNFRSF25-211ENST00000473343 PPP4R2Q9NY27 417 aa23.76■■□□□ 1.39
TNFRSF25-211ENST00000473343 PCDHB15Q9Y5E8 787 aa23.76■■□□□ 1.39
TNFRSF25-211ENST00000473343 NFIXQ14938 502 aa23.75■■□□□ 1.39
TNFRSF25-211ENST00000473343 JARID2Q92833 1246 aaPredicted RBP23.75■■□□□ 1.39
TNFRSF25-211ENST00000473343 UTP14AQ9BVJ6 771 aaKnown RBP23.75■■□□□ 1.39
TNFRSF25-211ENST00000473343 TRMT112Q9UI30 125 aaKnown RBP23.75■■□□□ 1.39
TNFRSF25-211ENST00000473343 LRRFIP2Q9Y608 721 aaKnown RBP23.75■■□□□ 1.39
TNFRSF25-211ENST00000473343 NLGN1Q8N2Q7 840 aa23.74■■□□□ 1.39
TNFRSF25-211ENST00000473343 FAM89AQ96GI7 184 aa23.74■■□□□ 1.39
TNFRSF25-211ENST00000473343 NTSR2O95665 410 aa23.74■■□□□ 1.39
TNFRSF25-211ENST00000473343 TM4SF1P30408 202 aa23.74■■□□□ 1.39
TNFRSF25-211ENST00000473343 RTL5Q5HYW3 569 aaPredicted RBP23.74■■□□□ 1.39
TNFRSF25-211ENST00000473343 KAZALD1Q96I82 304 aa23.74■■□□□ 1.39
TNFRSF25-211ENST00000473343 SUCLG2Q96I99 432 aa23.74■■□□□ 1.39
TNFRSF25-211ENST00000473343 CARMIL3Q8ND23 1372 aa23.73■■□□□ 1.39
TNFRSF25-211ENST00000473343 SH3TC1Q8TE82 1336 aa23.72■■□□□ 1.39
TNFRSF25-211ENST00000473343 CDHR2Q9BYE9 1310 aa23.72■■□□□ 1.39
TNFRSF25-211ENST00000473343 FAM177BA6PVY3 158 aa23.72■■□□□ 1.39
TNFRSF25-211ENST00000473343 CEP85Q6P2H3 762 aa23.71■■□□□ 1.39
TNFRSF25-211ENST00000473343 PDGFDQ9GZP0 370 aaPredicted RBP23.71■■□□□ 1.39
TNFRSF25-211ENST00000473343 NYXQ9GZU5 481 aa23.71■■□□□ 1.39
TNFRSF25-211ENST00000473343 COL24A1Q17RW2 1714 aa23.71■■□□□ 1.39
TNFRSF25-211ENST00000473343 RPAP2Q8IXW5 612 aaPredicted RBP23.7■■□□□ 1.38
TNFRSF25-211ENST00000473343 SYNE4Q8N205 404 aa23.7■■□□□ 1.38
TNFRSF25-211ENST00000473343 NBPF5PQ86XG9 351 aaPredicted RBP23.69■■□□□ 1.38
TNFRSF25-211ENST00000473343 ANKRD44Q8N8A2 993 aa23.69■■□□□ 1.38
TNFRSF25-211ENST00000473343 PLA2G12BQ9BX93 195 aa23.69■■□□□ 1.38
TNFRSF25-211ENST00000473343 BICC1Q9H694 974 aaKnown RBP23.69■■□□□ 1.38
TNFRSF25-211ENST00000473343 EPHA10Q5JZY3 1008 aa23.69■■□□□ 1.38
TNFRSF25-211ENST00000473343 TPTE2Q6XPS3 522 aa23.69■■□□□ 1.38
TNFRSF25-211ENST00000473343 NUTM1Q86Y26 1132 aa23.69■■□□□ 1.38
TNFRSF25-211ENST00000473343 POLRMTO00411 1230 aaKnown RBP23.68■■□□□ 1.38
TNFRSF25-211ENST00000473343 IRS4O14654 1257 aaPredicted RBP23.68■■□□□ 1.38
TNFRSF25-211ENST00000473343 DDR1Q08345 913 aa23.68■■□□□ 1.38
TNFRSF25-211ENST00000473343 SIRT2Q8IXJ6 389 aa23.68■■□□□ 1.38
TNFRSF25-211ENST00000473343 SLC16A10Q8TF71 515 aa23.68■■□□□ 1.38
TNFRSF25-211ENST00000473343 CCDC136Q96JN2 1154 aa23.68■■□□□ 1.38
TNFRSF25-211ENST00000473343 FOXO4P98177 505 aa23.67■■□□□ 1.38
TNFRSF25-211ENST00000473343 ATP8B2P98198 1209 aa23.67■■□□□ 1.38
TNFRSF25-211ENST00000473343 RABL6Q3YEC7 729 aaPredicted RBP23.67■■□□□ 1.38
TNFRSF25-211ENST00000473343 MSL1Q68DK7 614 aa23.67■■□□□ 1.38
TNFRSF25-211ENST00000473343 SERPINB2P05120 415 aa23.66■■□□□ 1.38
TNFRSF25-211ENST00000473343 MTX1Q13505 466 aa23.66■■□□□ 1.38
TNFRSF25-211ENST00000473343 HDAC1Q13547 482 aaPredicted RBP23.66■■□□□ 1.38
TNFRSF25-211ENST00000473343 R3HDM1Q15032 1099 aaKnown RBP23.66■■□□□ 1.38
TNFRSF25-211ENST00000473343 ERFEQ4G0M1 354 aa23.66■■□□□ 1.38
TNFRSF25-211ENST00000473343 B4GALNT3Q6L9W6 998 aa23.66■■□□□ 1.38
TNFRSF25-211ENST00000473343 HSP90B1P14625 803 aaKnown RBP23.65■■□□□ 1.38
TNFRSF25-211ENST00000473343 GTF2E1P29083 439 aaPredicted RBP23.65■■□□□ 1.38
TNFRSF25-211ENST00000473343 PNMA6EA0A0J9YXQ4 647 aa23.65■■□□□ 1.38
TNFRSF25-211ENST00000473343 PDE8AO60658 829 aa23.65■■□□□ 1.38
TNFRSF25-211ENST00000473343 MMP10P09238 476 aa23.65■■□□□ 1.38
TNFRSF25-211ENST00000473343 SLC10A5Q5PT55 438 aa23.65■■□□□ 1.38
TNFRSF25-211ENST00000473343 CNBD1Q8NA66 436 aa23.65■■□□□ 1.38
TNFRSF25-211ENST00000473343 IGHDP01880 384 aa23.64■■□□□ 1.37
TNFRSF25-211ENST00000473343 HCLS1P14317 486 aaPredicted RBP23.64■■□□□ 1.37
TNFRSF25-211ENST00000473343 RWDD1Q9H446 243 aaPredicted RBP23.64■■□□□ 1.37
TNFRSF25-211ENST00000473343 ABCC12Q96J65 1359 aa23.63■■□□□ 1.37
TNFRSF25-211ENST00000473343 SRGAP3O43295 1099 aa23.63■■□□□ 1.37
TNFRSF25-211ENST00000473343 PRR5LQ6MZQ0 368 aa23.63■■□□□ 1.37
TNFRSF25-211ENST00000473343 LMBR1LQ6UX01 489 aa23.63■■□□□ 1.37
TNFRSF25-211ENST00000473343 NPHP1O15259 732 aa23.62■■□□□ 1.37
TNFRSF25-211ENST00000473343 HMMRO75330 724 aa23.62■■□□□ 1.37
TNFRSF25-211ENST00000473343 CSF1RP07333 972 aa23.62■■□□□ 1.37
TNFRSF25-211ENST00000473343 PARP3Q9Y6F1 533 aa23.62■■□□□ 1.37
TNFRSF25-211ENST00000473343 CTSWP56202 376 aa23.61■■□□□ 1.37
TNFRSF25-211ENST00000473343 POLA2Q14181 598 aa23.61■■□□□ 1.37
TNFRSF25-211ENST00000473343 SSH3Q8TE77 659 aa23.61■■□□□ 1.37
TNFRSF25-211ENST00000473343 TTLL11Q8NHH1 800 aa23.61■■□□□ 1.37
TNFRSF25-211ENST00000473343 CASZ1Q86V15 1759 aa23.6■■□□□ 1.37
TNFRSF25-211ENST00000473343 ST5P78524 1137 aa23.6■■□□□ 1.37
TNFRSF25-211ENST00000473343 PSDA5PKW4 1024 aaPredicted RBP23.59■■□□□ 1.37
TNFRSF25-211ENST00000473343 CCDC24Q8N4L8 307 aa23.59■■□□□ 1.37
TNFRSF25-211ENST00000473343 KDM2BQ8NHM5 1336 aa23.59■■□□□ 1.37
TNFRSF25-211ENST00000473343 RIC1Q4ADV7 1423 aa23.58■■□□□ 1.37
TNFRSF25-211ENST00000473343 MTFR1LQ9H019 292 aa23.58■■□□□ 1.37
TNFRSF25-211ENST00000473343 CHMP3Q9Y3E7 222 aa23.58■■□□□ 1.37
TNFRSF25-211ENST00000473343 DDX60Q8IY21 1712 aaKnown RBP23.58■■□□□ 1.37
TNFRSF25-211ENST00000473343 LAMB2P55268 1798 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms