RNA–Protein interactions for RNA: ENST00000473079.1

EPHB3-202, Transcript of EPH receptor B3, humanhuman

TSL 2

Gene EPHB3, Length 486 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-202ENST00000473079 RNF123Q5XPI4 1314 aa26.99■■□□□ 1.91
EPHB3-202ENST00000473079 AIMP1Q12904 312 aaKnown RBP26.99■■□□□ 1.91
EPHB3-202ENST00000473079 DPY19L2Q6NUT2 758 aa26.99■■□□□ 1.91
EPHB3-202ENST00000473079 C16orf71Q8IYS4 520 aaPredicted RBP26.99■■□□□ 1.91
EPHB3-202ENST00000473079 RTKN2Q8IZC4 609 aa26.99■■□□□ 1.91
EPHB3-202ENST00000473079 TCIRG1Q13488 830 aa26.98■■□□□ 1.91
EPHB3-202ENST00000473079 UTP14AQ9BVJ6 771 aaKnown RBP26.98■■□□□ 1.91
EPHB3-202ENST00000473079 TNRC6CQ9HCJ0 1690 aaKnown RBP26.98■■□□□ 1.91
EPHB3-202ENST00000473079 CCDC88AQ3V6T2 1871 aa26.96■■□□□ 1.91
EPHB3-202ENST00000473079 VEGFAP15692 232 aaPredicted RBP26.96■■□□□ 1.91
EPHB3-202ENST00000473079 FKBP4Q02790 459 aaKnown RBP eCLIP26.96■■□□□ 1.91
EPHB3-202ENST00000473079 NLRP10Q86W26 655 aa26.96■■□□□ 1.91
EPHB3-202ENST00000473079 RPGRQ92834 1020 aaKnown RBP26.96■■□□□ 1.91
EPHB3-202ENST00000473079 CRAMP1Q96RY5 1269 aa26.96■■□□□ 1.91
EPHB3-202ENST00000473079 HYPKQ9NX55 129 aa26.96■■□□□ 1.91
EPHB3-202ENST00000473079 TIAM2Q8IVF5 1701 aa26.96■■□□□ 1.91
EPHB3-202ENST00000473079 CACNA1SQ13698 1873 aa26.96■■□□□ 1.91
EPHB3-202ENST00000473079 FSTL1Q12841 308 aa26.95■■□□□ 1.9
EPHB3-202ENST00000473079 CCDC27Q2M243 656 aa26.95■■□□□ 1.9
EPHB3-202ENST00000473079 CC2D2BQ6DHV5 1058 aa26.95■■□□□ 1.9
EPHB3-202ENST00000473079 PLBD2Q8NHP8 589 aa26.95■■□□□ 1.9
EPHB3-202ENST00000473079 NLRP3Q96P20 1036 aa26.95■■□□□ 1.9
EPHB3-202ENST00000473079 ANP32CO43423 234 aa26.94■■□□□ 1.9
EPHB3-202ENST00000473079 NCBP3Q53F19 620 aaKnown RBP26.94■■□□□ 1.9
EPHB3-202ENST00000473079 ANKRD13DQ6ZTN6 518 aa26.94■■□□□ 1.9
EPHB3-202ENST00000473079 RBM17Q96I25 401 aaKnown RBP26.94■■□□□ 1.9
EPHB3-202ENST00000473079 DICER1Q9UPY3 1922 aaKnown RBP26.94■■□□□ 1.9
EPHB3-202ENST00000473079 OLFM4Q6UX06 510 aa26.93■■□□□ 1.9
EPHB3-202ENST00000473079 CEP350Q5VT06 3117 aa26.92■■□□□ 1.9
EPHB3-202ENST00000473079 GRIPAP1Q4V328 841 aa26.92■■□□□ 1.9
EPHB3-202ENST00000473079 C3orf67Q6ZVT6 689 aa26.92■■□□□ 1.9
EPHB3-202ENST00000473079 SNED1Q8TER0 1413 aa26.91■■□□□ 1.9
EPHB3-202ENST00000473079 APLP1P51693 650 aa26.91■■□□□ 1.9
EPHB3-202ENST00000473079 PSMD1Q99460 953 aa26.91■■□□□ 1.9
EPHB3-202ENST00000473079 CHMP4AQ9BY43 222 aa26.91■■□□□ 1.9
EPHB3-202ENST00000473079 POTECB2RU33 542 aa26.9■■□□□ 1.9
EPHB3-202ENST00000473079 MRS2Q9HD23 443 aa26.9■■□□□ 1.9
EPHB3-202ENST00000473079 ANKRD36CQ5JPF3 1778 aa26.89■■□□□ 1.9
EPHB3-202ENST00000473079 SYNE4Q8N205 404 aa26.89■■□□□ 1.9
EPHB3-202ENST00000473079 C8orf58Q8NAV2 365 aa26.89■■□□□ 1.9
EPHB3-202ENST00000473079 ISCA1Q9BUE6 129 aa26.89■■□□□ 1.9
EPHB3-202ENST00000473079 ZNF277Q9NRM2 450 aaPredicted RBP26.89■■□□□ 1.9
EPHB3-202ENST00000473079 TRMT112Q9UI30 125 aaKnown RBP26.89■■□□□ 1.9
EPHB3-202ENST00000473079 WDR90Q96KV7 1748 aa26.88■■□□□ 1.89
EPHB3-202ENST00000473079 WWC1Q8IX03 1113 aa26.88■■□□□ 1.89
EPHB3-202ENST00000473079 SMC1BQ8NDV3 1235 aa26.88■■□□□ 1.89
EPHB3-202ENST00000473079 SH3TC1Q8TE82 1336 aa26.88■■□□□ 1.89
EPHB3-202ENST00000473079 ELL2O00472 640 aaPredicted RBP26.87■■□□□ 1.89
EPHB3-202ENST00000473079 TRIM28Q13263 835 aaKnown RBP26.87■■□□□ 1.89
EPHB3-202ENST00000473079 IARSP41252 1262 aaKnown RBP26.86■■□□□ 1.89
EPHB3-202ENST00000473079 PPEF1O14829 653 aaPredicted RBP26.85■■□□□ 1.89
EPHB3-202ENST00000473079 DDNO94850 711 aaPredicted RBP26.85■■□□□ 1.89
EPHB3-202ENST00000473079 HCLS1P14317 486 aaPredicted RBP26.84■■□□□ 1.89
EPHB3-202ENST00000473079 IL16Q14005 1332 aa26.84■■□□□ 1.89
EPHB3-202ENST00000473079 BBOX1O75936 387 aa26.83■■□□□ 1.89
EPHB3-202ENST00000473079 CCDC30Q5VVM6 783 aa26.83■■□□□ 1.89
EPHB3-202ENST00000473079 L3MBTL3Q96JM7 780 aaPredicted RBP26.83■■□□□ 1.89
EPHB3-202ENST00000473079 ATP6V0A2Q9Y487 856 aa26.83■■□□□ 1.89
EPHB3-202ENST00000473079 FZD9O00144 591 aa26.82■■□□□ 1.88
EPHB3-202ENST00000473079 GOLGA2Q08379 1002 aa26.82■■□□□ 1.88
EPHB3-202ENST00000473079 PHAXQ9H814 394 aaKnown RBP26.82■■□□□ 1.88
EPHB3-202ENST00000473079 ABCC4O15439 1325 aa26.82■■□□□ 1.88
EPHB3-202ENST00000473079 ATP5J2-PTCD1G3V325 749 aa26.81■■□□□ 1.88
EPHB3-202ENST00000473079 RIC3Q7Z5B4 369 aa26.81■■□□□ 1.88
EPHB3-202ENST00000473079 TMX4Q9H1E5 349 aaPredicted RBP26.81■■□□□ 1.88
EPHB3-202ENST00000473079 DDX46Q7L014 1031 aaKnown RBP26.8■■□□□ 1.88
EPHB3-202ENST00000473079 TSPYL6Q8N831 410 aa26.8■■□□□ 1.88
EPHB3-202ENST00000473079 JDP2Q8WYK2 163 aa26.8■■□□□ 1.88
EPHB3-202ENST00000473079 SP8Q8IXZ3 490 aa26.79■■□□□ 1.88
EPHB3-202ENST00000473079 DNAJC5GQ8N7S2 189 aa26.79■■□□□ 1.88
EPHB3-202ENST00000473079 TSR2Q969E8 191 aaKnown RBP26.79■■□□□ 1.88
EPHB3-202ENST00000473079 FAM89AQ96GI7 184 aa26.79■■□□□ 1.88
EPHB3-202ENST00000473079 VPS33BQ9H267 617 aa26.79■■□□□ 1.88
EPHB3-202ENST00000473079 IQCA1LA6NCM1 817 aa26.78■■□□□ 1.88
EPHB3-202ENST00000473079 TCERG1O14776 1098 aaKnown RBP26.78■■□□□ 1.88
EPHB3-202ENST00000473079 SF3B3Q15393 1217 aaKnown RBP26.78■■□□□ 1.88
EPHB3-202ENST00000473079 ZNF541Q9H0D2 1346 aa26.78■■□□□ 1.88
EPHB3-202ENST00000473079 GRAPQ13588 217 aa26.77■■□□□ 1.88
EPHB3-202ENST00000473079 GRAPLQ8TC17 118 aaPredicted RBP26.77■■□□□ 1.88
EPHB3-202ENST00000473079 DDX58O95786 925 aaKnown RBP26.76■■□□□ 1.87
EPHB3-202ENST00000473079 TMC4Q7Z404 712 aa26.76■■□□□ 1.87
EPHB3-202ENST00000473079 WDR63Q8IWG1 891 aa26.76■■□□□ 1.87
EPHB3-202ENST00000473079 RTFDC1Q9BY42 306 aaPredicted RBP26.76■■□□□ 1.87
EPHB3-202ENST00000473079 SLC51AQ86UW1 340 aa26.75■■□□□ 1.87
EPHB3-202ENST00000473079 GPC2Q8N158 579 aa26.75■■□□□ 1.87
EPHB3-202ENST00000473079 CCDC191Q8NCU4 936 aa26.75■■□□□ 1.87
EPHB3-202ENST00000473079 LAMB2P55268 1798 aa26.75■■□□□ 1.87
EPHB3-202ENST00000473079 TWISTNBQ3B726 338 aaPredicted RBP26.74■■□□□ 1.87
EPHB3-202ENST00000473079 LARGE2Q8N3Y3 721 aa26.74■■□□□ 1.87
EPHB3-202ENST00000473079 ZBTB38Q8NAP3 1195 aaPredicted RBP26.74■■□□□ 1.87
EPHB3-202ENST00000473079 SUPT20HQ8NEM7 779 aa26.74■■□□□ 1.87
EPHB3-202ENST00000473079 TAF1DQ9H5J8 278 aaPredicted RBP26.74■■□□□ 1.87
EPHB3-202ENST00000473079 IRS4O14654 1257 aaPredicted RBP26.73■■□□□ 1.87
EPHB3-202ENST00000473079 HSP90B1P14625 803 aaKnown RBP26.73■■□□□ 1.87
EPHB3-202ENST00000473079 ZNF428Q96B54 188 aa26.73■■□□□ 1.87
EPHB3-202ENST00000473079 METTL22Q9BUU2 404 aaPredicted RBP26.73■■□□□ 1.87
EPHB3-202ENST00000473079 EIF6P56537 245 aaKnown RBP26.72■■□□□ 1.87
EPHB3-202ENST00000473079 CHADLQ6NUI6 762 aa26.72■■□□□ 1.87
EPHB3-202ENST00000473079 MYD88Q99836 296 aa26.72■■□□□ 1.87
EPHB3-202ENST00000473079 STK31Q9BXU1 1019 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms