RNA–Protein interactions for RNA: ENST00000473073.1

PCCB-211, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,964 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-211ENST00000473073 H7C1W4 665 aa15.69■□□□□ 0.1
PCCB-211ENST00000473073 NUCB1Q02818 461 aa15.69■□□□□ 0.1
PCCB-211ENST00000473073 FAM89AQ96GI7 184 aa15.69■□□□□ 0.1
PCCB-211ENST00000473073 RTCBQ9Y3I0 505 aaKnown RBP15.69■□□□□ 0.1
PCCB-211ENST00000473073 IBTKQ9P2D0 1353 aaPredicted RBP15.69■□□□□ 0.1
PCCB-211ENST00000473073 C4AP0C0L4 1744 aa15.69■□□□□ 0.1
PCCB-211ENST00000473073 PDE4AP27815 886 aa15.69■□□□□ 0.1
PCCB-211ENST00000473073 HSP90AB3PQ58FF7 597 aa15.69■□□□□ 0.1
PCCB-211ENST00000473073 SLC27A3Q5K4L6 730 aa15.69■□□□□ 0.1
PCCB-211ENST00000473073 SSH3Q8TE77 659 aa15.69■□□□□ 0.1
PCCB-211ENST00000473073 SCN7AQ01118 1682 aa15.69■□□□□ 0.1
PCCB-211ENST00000473073 SMARCA5O60264 1052 aaPredicted RBP15.68■□□□□ 0.1
PCCB-211ENST00000473073 POLA2Q14181 598 aa15.68■□□□□ 0.1
PCCB-211ENST00000473073 CHD1LQ86WJ1 897 aa15.68■□□□□ 0.1
PCCB-211ENST00000473073 TRIM28Q13263 835 aaKnown RBP15.67■□□□□ 0.1
PCCB-211ENST00000473073 USPL1Q5W0Q7 1092 aa15.67■□□□□ 0.1
PCCB-211ENST00000473073 ZNF34Q8IZ26 560 aa15.67■□□□□ 0.1
PCCB-211ENST00000473073 ARHGEF1Q92888 912 aaKnown RBP15.67■□□□□ 0.1
PCCB-211ENST00000473073 PA2G4Q9UQ80 394 aaKnown RBP15.67■□□□□ 0.1
PCCB-211ENST00000473073 MTX1Q13505 466 aa15.67■□□□□ 0.1
PCCB-211ENST00000473073 KLHDC4Q8TBB5 520 aa15.67■□□□□ 0.1
PCCB-211ENST00000473073 UBR3Q6ZT12 1888 aa15.67■□□□□ 0.1
PCCB-211ENST00000473073 PLSCR1O15162 318 aa15.66■□□□□ 0.1
PCCB-211ENST00000473073 BCL2L12Q9HB09 334 aa15.66■□□□□ 0.1
PCCB-211ENST00000473073 HDAC5Q9UQL6 1122 aa15.66■□□□□ 0.1
PCCB-211ENST00000473073 NIP7Q9Y221 180 aaKnown RBP eCLIP15.66■□□□□ 0.1
PCCB-211ENST00000473073 SURF6O75683 361 aaKnown RBP15.66■□□□□ 0.1
PCCB-211ENST00000473073 PCCAP05165 728 aaPredicted RBP15.66■□□□□ 0.1
PCCB-211ENST00000473073 FOXO4P98177 505 aa15.66■□□□□ 0.1
PCCB-211ENST00000473073 SUSD4Q5VX71 490 aa15.66■□□□□ 0.1
PCCB-211ENST00000473073 BICDL1Q6ZP65 573 aa15.66■□□□□ 0.1
PCCB-211ENST00000473073 ZBTB38Q8NAP3 1195 aaPredicted RBP15.66■□□□□ 0.1
PCCB-211ENST00000473073 TRMT112Q9UI30 125 aaKnown RBP15.66■□□□□ 0.1
PCCB-211ENST00000473073 CHMP3Q9Y3E7 222 aa15.66■□□□□ 0.1
PCCB-211ENST00000473073 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.65■□□□□ 0.1
PCCB-211ENST00000473073 LMBR1LQ6UX01 489 aa15.65■□□□□ 0.1
PCCB-211ENST00000473073 CCDC85AQ96PX6 553 aaPredicted RBP15.65■□□□□ 0.1
PCCB-211ENST00000473073 NARFQ9UHQ1 456 aa15.65■□□□□ 0.1
PCCB-211ENST00000473073 ZPR1O75312 459 aa15.64■□□□□ 0.09
PCCB-211ENST00000473073 ZNF827Q17R98 1081 aa15.64■□□□□ 0.09
PCCB-211ENST00000473073 TRAPPC3LQ5T215 181 aa15.64■□□□□ 0.09
PCCB-211ENST00000473073 TBC1D9BQ66K14 1250 aa15.64■□□□□ 0.09
PCCB-211ENST00000473073 C16orf71Q8IYS4 520 aaPredicted RBP15.64■□□□□ 0.09
PCCB-211ENST00000473073 ZNF652Q9Y2D9 606 aa15.64■□□□□ 0.09
PCCB-211ENST00000473073 RFC4P35249 363 aa15.64■□□□□ 0.09
PCCB-211ENST00000473073 RABL6Q3YEC7 729 aaPredicted RBP15.64■□□□□ 0.09
PCCB-211ENST00000473073 SIL1Q9H173 461 aa15.64■□□□□ 0.09
PCCB-211ENST00000473073 EN1Q05925 392 aaPredicted RBP15.63■□□□□ 0.09
PCCB-211ENST00000473073 NUTM1Q86Y26 1132 aa15.63■□□□□ 0.09
PCCB-211ENST00000473073 OTUD7AQ8TE49 926 aaPredicted RBP15.63■□□□□ 0.09
PCCB-211ENST00000473073 USP42Q9H9J4 1324 aaKnown RBP15.62■□□□□ 0.09
PCCB-211ENST00000473073 EZH2Q15910 746 aaKnown RBP15.62■□□□□ 0.09
PCCB-211ENST00000473073 CLEC4GQ6UXB4 293 aa15.62■□□□□ 0.09
PCCB-211ENST00000473073 IL1RAPL2Q9NP60 686 aa15.62■□□□□ 0.09
PCCB-211ENST00000473073 IRS4O14654 1257 aaPredicted RBP15.62■□□□□ 0.09
PCCB-211ENST00000473073 ZBTB47Q9UFB7 747 aaPredicted RBP15.62■□□□□ 0.09
PCCB-211ENST00000473073 CDHR2Q9BYE9 1310 aa15.61■□□□□ 0.09
PCCB-211ENST00000473073 NTSR2O95665 410 aa15.61■□□□□ 0.09
PCCB-211ENST00000473073 HCLS1P14317 486 aaPredicted RBP15.61■□□□□ 0.09
PCCB-211ENST00000473073 RFX5P48382 616 aaPredicted RBP15.61■□□□□ 0.09
PCCB-211ENST00000473073 OS9Q13438 667 aaPredicted RBP15.61■□□□□ 0.09
PCCB-211ENST00000473073 UTP14AQ9BVJ6 771 aaKnown RBP15.61■□□□□ 0.09
PCCB-211ENST00000473073 LRRCC1Q9C099 1032 aa15.61■□□□□ 0.09
PCCB-211ENST00000473073 TFCP2L1Q9NZI6 479 aa15.61■□□□□ 0.09
PCCB-211ENST00000473073 TUBGCP6Q96RT7 1819 aa15.61■□□□□ 0.09
PCCB-211ENST00000473073 RGPD3A6NKT7 1758 aaPredicted RBP15.6■□□□□ 0.09
PCCB-211ENST00000473073 RGPD4Q7Z3J3 1758 aa15.6■□□□□ 0.09
PCCB-211ENST00000473073 FAM161AQ3B820 660 aa15.6■□□□□ 0.09
PCCB-211ENST00000473073 PARP10Q53GL7 1025 aa15.6■□□□□ 0.09
PCCB-211ENST00000473073 SH3TC1Q8TE82 1336 aa15.6■□□□□ 0.09
PCCB-211ENST00000473073 PTPN12Q05209 780 aaKnown RBP15.6■□□□□ 0.09
PCCB-211ENST00000473073 ZNF594Q96JF6 807 aaPredicted RBP15.6■□□□□ 0.09
PCCB-211ENST00000473073 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.6■□□□□ 0.09
PCCB-211ENST00000473073 DDX60Q8IY21 1712 aaKnown RBP15.59■□□□□ 0.09
PCCB-211ENST00000473073 SSFA2P28290 1259 aa15.59■□□□□ 0.09
PCCB-211ENST00000473073 DEFB132Q7Z7B7 95 aa15.59■□□□□ 0.09
PCCB-211ENST00000473073 RHPN1Q8TCX5 695 aa15.59■□□□□ 0.09
PCCB-211ENST00000473073 AKT1S1Q96B36 256 aa15.59■□□□□ 0.09
PCCB-211ENST00000473073 NOP58Q9Y2X3 529 aaKnown RBP15.59■□□□□ 0.09
PCCB-211ENST00000473073 MYH3P11055 1940 aa15.59■□□□□ 0.09
PCCB-211ENST00000473073 ADRA2BP18089 450 aa15.58■□□□□ 0.09
PCCB-211ENST00000473073 CTSWP56202 376 aa15.58■□□□□ 0.09
PCCB-211ENST00000473073 CCDC24Q8N4L8 307 aa15.58■□□□□ 0.09
PCCB-211ENST00000473073 CAMKK2Q96RR4 588 aa15.58■□□□□ 0.09
PCCB-211ENST00000473073 PLA2G12BQ9BX93 195 aa15.58■□□□□ 0.09
PCCB-211ENST00000473073 ERFEQ4G0M1 354 aa15.58■□□□□ 0.08
PCCB-211ENST00000473073 TSHZ3Q63HK5 1081 aa15.58■□□□□ 0.08
PCCB-211ENST00000473073 SETDB2Q96T68 719 aa15.58■□□□□ 0.08
PCCB-211ENST00000473073 GREM2Q9H772 168 aa15.58■□□□□ 0.08
PCCB-211ENST00000473073 COL24A1Q17RW2 1714 aa15.57■□□□□ 0.08
PCCB-211ENST00000473073 PDE8AO60658 829 aa15.57■□□□□ 0.08
PCCB-211ENST00000473073 RAB11FIP3O75154 756 aa15.57■□□□□ 0.08
PCCB-211ENST00000473073 G3BP1Q13283 466 aaKnown RBP eCLIP15.57■□□□□ 0.084e-6■■■□□ 15.7
PCCB-211ENST00000473073 PLEKHM2Q8IWE5 1019 aa15.57■□□□□ 0.08
PCCB-211ENST00000473073 TTLL11Q8NHH1 800 aa15.57■□□□□ 0.08
PCCB-211ENST00000473073 KIF1BPQ96EK5 621 aa15.57■□□□□ 0.08
PCCB-211ENST00000473073 ANO8Q9HCE9 1232 aaPredicted RBP15.57■□□□□ 0.08
PCCB-211ENST00000473073 TSHZ2Q9NRE2 1034 aa15.57■□□□□ 0.08
PCCB-211ENST00000473073 MSH5O43196 834 aa15.56■□□□□ 0.08
PCCB-211ENST00000473073 SASH1O94885 1247 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms