RNA–Protein interactions for RNA: ENST00000472961.1

CFHR1-204, Transcript of complement factor H related 1, humanhuman

TSL 1 (best)

Gene CFHR1, Length 399 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR1-204ENST00000472961 NPR1P16066 1061 aa8.48□□□□□ -1.05
CFHR1-204ENST00000472961 MAP2K2P36507 400 aa8.48□□□□□ -1.05
CFHR1-204ENST00000472961 HLFQ16534 295 aa8.48□□□□□ -1.05
CFHR1-204ENST00000472961 CDCA8Q53HL2 280 aa8.48□□□□□ -1.05
CFHR1-204ENST00000472961 ZNF790Q6PG37 636 aa8.48□□□□□ -1.05
CFHR1-204ENST00000472961 C3orf67Q6ZVT6 689 aa8.48□□□□□ -1.05
CFHR1-204ENST00000472961 PAXIP1Q6ZW49 1069 aaPredicted RBP8.48□□□□□ -1.05
CFHR1-204ENST00000472961 GJA3Q9Y6H8 435 aa8.48□□□□□ -1.05
CFHR1-204ENST00000472961 A0A087WZG4 1122 aa8.47□□□□□ -1.05
CFHR1-204ENST00000472961 STARD3NLO95772 234 aa8.47□□□□□ -1.05
CFHR1-204ENST00000472961 BRPF1P55201 1214 aaPredicted RBP8.47□□□□□ -1.05
CFHR1-204ENST00000472961 ST5P78524 1137 aa8.47□□□□□ -1.05
CFHR1-204ENST00000472961 CRY2Q49AN0 593 aa8.47□□□□□ -1.05
CFHR1-204ENST00000472961 SOGA3Q5TF21 947 aa8.47□□□□□ -1.05
CFHR1-204ENST00000472961 DZIP3Q86Y13 1208 aaKnown RBP8.47□□□□□ -1.05
CFHR1-204ENST00000472961 PSMD1Q99460 953 aa8.47□□□□□ -1.05
CFHR1-204ENST00000472961 FAM177BA6PVY3 158 aa8.46□□□□□ -1.06
CFHR1-204ENST00000472961 CELF2O95319 508 aaKnown RBP8.46□□□□□ -1.06
CFHR1-204ENST00000472961 ECE1P42892 770 aa8.46□□□□□ -1.06
CFHR1-204ENST00000472961 AMER1Q5JTC6 1135 aaPredicted RBP8.46□□□□□ -1.06
CFHR1-204ENST00000472961 NBPF5PQ86XG9 351 aaPredicted RBP8.46□□□□□ -1.06
CFHR1-204ENST00000472961 TRPM4Q8TD43 1214 aa8.46□□□□□ -1.06
CFHR1-204ENST00000472961 PGAP2Q9UHJ9 254 aa8.46□□□□□ -1.06
CFHR1-204ENST00000472961 EGFRP00533 1210 aa8.45□□□□□ -1.06
CFHR1-204ENST00000472961 PRPF38BQ5VTL8 546 aaKnown RBP8.45□□□□□ -1.06
CFHR1-204ENST00000472961 USP50Q70EL3 339 aaPredicted RBP8.45□□□□□ -1.06
CFHR1-204ENST00000472961 NUTM1Q86Y26 1132 aa8.45□□□□□ -1.06
CFHR1-204ENST00000472961 RTKN2Q8IZC4 609 aa8.45□□□□□ -1.06
CFHR1-204ENST00000472961 POLR3GLQ9BT43 218 aa8.45□□□□□ -1.06
CFHR1-204ENST00000472961 GPRC5DQ9NZD1 345 aa8.45□□□□□ -1.06
CFHR1-204ENST00000472961 UBN2Q6ZU65 1347 aa8.45□□□□□ -1.06
CFHR1-204ENST00000472961 UNC80Q8N2C7 3258 aa8.44□□□□□ -1.06
CFHR1-204ENST00000472961 CXCL9Q07325 125 aa8.44□□□□□ -1.06
CFHR1-204ENST00000472961 MORC1Q86VD1 984 aa8.44□□□□□ -1.06
CFHR1-204ENST00000472961 HHIPL1Q96JK4 782 aa8.44□□□□□ -1.06
CFHR1-204ENST00000472961 NPC1L1Q9UHC9 1359 aa8.44□□□□□ -1.06
CFHR1-204ENST00000472961 ZSWIM8A7E2V4 1837 aa8.43□□□□□ -1.06
CFHR1-204ENST00000472961 SPEF2Q9C093 1822 aa8.43□□□□□ -1.06
CFHR1-204ENST00000472961 YDJCA8MPS7 323 aa8.43□□□□□ -1.06
CFHR1-204ENST00000472961 AOC3Q16853 763 aa8.43□□□□□ -1.06
CFHR1-204ENST00000472961 CLEC4GQ6UXB4 293 aa8.43□□□□□ -1.06
CFHR1-204ENST00000472961 TTC5Q8N0Z6 440 aa8.43□□□□□ -1.06
CFHR1-204ENST00000472961 PHACTR3Q96KR7 559 aa8.43□□□□□ -1.06
CFHR1-204ENST00000472961 BEGAINQ9BUH8 593 aa8.43□□□□□ -1.06
CFHR1-204ENST00000472961 NIP7Q9Y221 180 aaKnown RBP eCLIP8.43□□□□□ -1.06
CFHR1-204ENST00000472961 LAMA3Q16787 3333 aa8.42□□□□□ -1.06
CFHR1-204ENST00000472961 TCERG1O14776 1098 aaKnown RBP8.42□□□□□ -1.06
CFHR1-204ENST00000472961 CA12O43570 354 aa8.42□□□□□ -1.06
CFHR1-204ENST00000472961 HOXA10P31260 410 aaPredicted RBP8.42□□□□□ -1.06
CFHR1-204ENST00000472961 GMPSP49915 693 aaPredicted RBP8.42□□□□□ -1.06
CFHR1-204ENST00000472961 EIF6P56537 245 aaKnown RBP8.42□□□□□ -1.06
CFHR1-204ENST00000472961 TRIM26Q12899 539 aaPredicted RBP8.42□□□□□ -1.06
CFHR1-204ENST00000472961 FMNL2Q96PY5 1086 aa8.42□□□□□ -1.06
CFHR1-204ENST00000472961 ADARB2Q9NS39 739 aaKnown RBP8.42□□□□□ -1.06
CFHR1-204ENST00000472961 EYSQ5T1H1 3165 aa8.41□□□□□ -1.06
CFHR1-204ENST00000472961 ASTN2O75129 1339 aaPredicted RBP8.41□□□□□ -1.06
CFHR1-204ENST00000472961 NPHP1O15259 732 aa8.41□□□□□ -1.06
CFHR1-204ENST00000472961 LMOD1P29536 600 aaPredicted RBP8.41□□□□□ -1.06
CFHR1-204ENST00000472961 LARGE2Q8N3Y3 721 aa8.41□□□□□ -1.06
CFHR1-204ENST00000472961 JDP2Q8WYK2 163 aa8.41□□□□□ -1.06
CFHR1-204ENST00000472961 ZNF408Q9H9D4 720 aa8.41□□□□□ -1.06
CFHR1-204ENST00000472961 RNF186Q9NXI6 227 aa8.41□□□□□ -1.06
CFHR1-204ENST00000472961 KIF7Q2M1P5 1343 aa8.4□□□□□ -1.06
CFHR1-204ENST00000472961 GNAT3A8MTJ3 354 aa8.4□□□□□ -1.06
CFHR1-204ENST00000472961 NTSR2O95665 410 aa8.4□□□□□ -1.06
CFHR1-204ENST00000472961 HSPA5P11021 654 aaKnown RBP8.4□□□□□ -1.06
CFHR1-204ENST00000472961 ALDH1B1P30837 517 aa8.4□□□□□ -1.06
CFHR1-204ENST00000472961 KIF23Q02241 960 aaPredicted RBP8.4□□□□□ -1.06
CFHR1-204ENST00000472961 TPTE2Q6XPS3 522 aa8.4□□□□□ -1.06
CFHR1-204ENST00000472961 TTLL7Q6ZT98 887 aa8.4□□□□□ -1.06
CFHR1-204ENST00000472961 TEX13AQ9BXU3 409 aaPredicted RBP8.4□□□□□ -1.06
CFHR1-204ENST00000472961 HPS5Q9UPZ3 1129 aa8.4□□□□□ -1.06
CFHR1-204ENST00000472961 KIAA0100Q14667 2235 aaKnown RBP8.39□□□□□ -1.07
CFHR1-204ENST00000472961 OTOFQ9HC10 1997 aa8.39□□□□□ -1.07
CFHR1-204ENST00000472961 ECM29Q5VYK3 1845 aa8.39□□□□□ -1.07
CFHR1-204ENST00000472961 BTBD11A6QL63 1104 aa8.39□□□□□ -1.07
CFHR1-204ENST00000472961 ADM5C9JUS6 153 aa8.39□□□□□ -1.07
CFHR1-204ENST00000472961 PPEF1O14829 653 aaPredicted RBP8.39□□□□□ -1.07
CFHR1-204ENST00000472961 PER1O15534 1290 aaPredicted RBP8.39□□□□□ -1.07
CFHR1-204ENST00000472961 PPIP5K2O43314 1243 aa8.39□□□□□ -1.07
CFHR1-204ENST00000472961 TRPA1O75762 1119 aa8.39□□□□□ -1.07
CFHR1-204ENST00000472961 RAD17O75943 681 aa8.39□□□□□ -1.07
CFHR1-204ENST00000472961 HUNKP57058 714 aa8.39□□□□□ -1.07
CFHR1-204ENST00000472961 TEFQ10587 303 aa8.39□□□□□ -1.07
CFHR1-204ENST00000472961 NOGQ13253 232 aa8.39□□□□□ -1.07
CFHR1-204ENST00000472961 DCTN1Q14203 1278 aa8.39□□□□□ -1.07
CFHR1-204ENST00000472961 SUSD4Q5VX71 490 aa8.39□□□□□ -1.07
CFHR1-204ENST00000472961 SAMD7Q7Z3H4 446 aa8.39□□□□□ -1.07
CFHR1-204ENST00000472961 USP48Q86UV5 1035 aa8.39□□□□□ -1.07
CFHR1-204ENST00000472961 CSRNP1Q96S65 589 aa8.39□□□□□ -1.07
CFHR1-204ENST00000472961 RTFDC1Q9BY42 306 aaPredicted RBP8.39□□□□□ -1.07
CFHR1-204ENST00000472961 KCNQ5Q9NR82 932 aa8.39□□□□□ -1.07
CFHR1-204ENST00000472961 ZBTB12Q9Y330 459 aaPredicted RBP8.39□□□□□ -1.07
CFHR1-204ENST00000472961 LAMA2P24043 3122 aaKnown RBP8.38□□□□□ -1.07
CFHR1-204ENST00000472961 IBTKQ9P2D0 1353 aaPredicted RBP8.38□□□□□ -1.07
CFHR1-204ENST00000472961 CEP290O15078 2479 aa8.38□□□□□ -1.07
CFHR1-204ENST00000472961 ABCC4O15439 1325 aa8.38□□□□□ -1.07
CFHR1-204ENST00000472961 DIAPH1O60610 1272 aaKnown RBP8.38□□□□□ -1.07
CFHR1-204ENST00000472961 GPTP24298 496 aa8.38□□□□□ -1.07
CFHR1-204ENST00000472961 LRP10Q7Z4F1 713 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms