RNA–Protein interactions for RNA: ENST00000472789.1

SMARCD3-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 863 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-208ENST00000472789 ADCY9O60503 1353 aa13.41□□□□□ -0.26
SMARCD3-208ENST00000472789 RNF123Q5XPI4 1314 aa13.4□□□□□ -0.26
SMARCD3-208ENST00000472789 IPO8O15397 1037 aaKnown RBP13.4□□□□□ -0.26
SMARCD3-208ENST00000472789 DPEP1P16444 411 aa13.4□□□□□ -0.26
SMARCD3-208ENST00000472789 CHRNA5P30532 468 aa13.4□□□□□ -0.26
SMARCD3-208ENST00000472789 RARSP54136 660 aaKnown RBP13.4□□□□□ -0.26
SMARCD3-208ENST00000472789 RRP1P56182 461 aaKnown RBP13.4□□□□□ -0.26
SMARCD3-208ENST00000472789 TGFB2P61812 414 aa13.4□□□□□ -0.26
SMARCD3-208ENST00000472789 ERFEQ4G0M1 354 aa13.4□□□□□ -0.26
SMARCD3-208ENST00000472789 NLRP10Q86W26 655 aa13.4□□□□□ -0.26
SMARCD3-208ENST00000472789 METTL22Q9BUU2 404 aaPredicted RBP13.4□□□□□ -0.26
SMARCD3-208ENST00000472789 GPBP1L1Q9HC44 474 aaPredicted RBP13.4□□□□□ -0.26
SMARCD3-208ENST00000472789 TRMT112Q9UI30 125 aaKnown RBP13.4□□□□□ -0.26
SMARCD3-208ENST00000472789 GTF3C3Q9Y5Q9 886 aa13.4□□□□□ -0.26
SMARCD3-208ENST00000472789 AFDNP55196 1824 aaKnown RBP13.39□□□□□ -0.27
SMARCD3-208ENST00000472789 F6X3S4 739 aa13.39□□□□□ -0.27
SMARCD3-208ENST00000472789 PDE6BP35913 854 aa13.39□□□□□ -0.27
SMARCD3-208ENST00000472789 RTL5Q5HYW3 569 aaPredicted RBP13.39□□□□□ -0.27
SMARCD3-208ENST00000472789 C2CD5Q86YS7 1000 aa13.39□□□□□ -0.27
SMARCD3-208ENST00000472789 MRPL50Q8N5N7 158 aaKnown RBP13.39□□□□□ -0.27
SMARCD3-208ENST00000472789 ZNF526Q8TF50 670 aaPredicted RBP13.39□□□□□ -0.27
SMARCD3-208ENST00000472789 DNAAF4Q8WXU2 420 aa13.39□□□□□ -0.27
SMARCD3-208ENST00000472789 BRIP1Q9BX63 1249 aa13.39□□□□□ -0.27
SMARCD3-208ENST00000472789 KIF16BQ96L93 1317 aa13.39□□□□□ -0.27
SMARCD3-208ENST00000472789 PXDNLA1KZ92 1463 aa13.38□□□□□ -0.27
SMARCD3-208ENST00000472789 H0YIN7 160 aa13.38□□□□□ -0.27
SMARCD3-208ENST00000472789 NTSR2O95665 410 aa13.38□□□□□ -0.27
SMARCD3-208ENST00000472789 SLC4A10Q6U841 1118 aa13.38□□□□□ -0.27
SMARCD3-208ENST00000472789 ZNF622Q969S3 477 aaKnown RBP eCLIP13.38□□□□□ -0.27
SMARCD3-208ENST00000472789 ISCA1Q9BUE6 129 aa13.38□□□□□ -0.27
SMARCD3-208ENST00000472789 ARFGEF2Q9Y6D5 1785 aa13.37□□□□□ -0.27
SMARCD3-208ENST00000472789 ABCC12Q96J65 1359 aa13.37□□□□□ -0.27
SMARCD3-208ENST00000472789 HSPA6P17066 643 aa13.37□□□□□ -0.27
SMARCD3-208ENST00000472789 CWC25Q9NXE8 425 aaPredicted RBP13.37□□□□□ -0.27
SMARCD3-208ENST00000472789 BCS1LQ9Y276 419 aa13.37□□□□□ -0.27
SMARCD3-208ENST00000472789 SH3TC1Q8TE82 1336 aa13.37□□□□□ -0.27
SMARCD3-208ENST00000472789 NRXN2Q9P2S2 1712 aa13.36□□□□□ -0.27
SMARCD3-208ENST00000472789 CACNA1FO60840 1977 aa13.36□□□□□ -0.27
SMARCD3-208ENST00000472789 IBTKQ9P2D0 1353 aaPredicted RBP13.36□□□□□ -0.27
SMARCD3-208ENST00000472789 HCLS1P14317 486 aaPredicted RBP13.36□□□□□ -0.27
SMARCD3-208ENST00000472789 BRPF1P55201 1214 aaPredicted RBP13.36□□□□□ -0.27
SMARCD3-208ENST00000472789 CWF19L2Q2TBE0 894 aaKnown RBP13.36□□□□□ -0.27
SMARCD3-208ENST00000472789 SYNE4Q8N205 404 aa13.36□□□□□ -0.27
SMARCD3-208ENST00000472789 JARID2Q92833 1246 aaPredicted RBP13.36□□□□□ -0.27
SMARCD3-208ENST00000472789 FAM89AQ96GI7 184 aa13.36□□□□□ -0.27
SMARCD3-208ENST00000472789 PIM2Q9P1W9 311 aa13.36□□□□□ -0.27
SMARCD3-208ENST00000472789 ANKRD36CQ5JPF3 1778 aa13.35□□□□□ -0.27
SMARCD3-208ENST00000472789 BCAR3O75815 825 aa13.35□□□□□ -0.27
SMARCD3-208ENST00000472789 IGKV5-2P06315 115 aa13.35□□□□□ -0.27
SMARCD3-208ENST00000472789 TRIM28Q13263 835 aaKnown RBP13.35□□□□□ -0.27
SMARCD3-208ENST00000472789 PDE3AQ14432 1141 aa13.35□□□□□ -0.27
SMARCD3-208ENST00000472789 ZKSCAN2Q63HK3 967 aa13.35□□□□□ -0.27
SMARCD3-208ENST00000472789 CCDC191Q8NCU4 936 aa13.35□□□□□ -0.27
SMARCD3-208ENST00000472789 FRAT1Q92837 279 aaPredicted RBP13.35□□□□□ -0.27
SMARCD3-208ENST00000472789 NOB1Q9ULX3 412 aaKnown RBP13.35□□□□□ -0.27
SMARCD3-208ENST00000472789 PTPRCP08575 1304 aa13.35□□□□□ -0.27
SMARCD3-208ENST00000472789 N4BP2Q86UW6 1770 aaPredicted RBP13.35□□□□□ -0.27
SMARCD3-208ENST00000472789 NEURL1BA8MQ27 555 aa13.34□□□□□ -0.27
SMARCD3-208ENST00000472789 DALRD3Q5D0E6 543 aaKnown RBP13.34□□□□□ -0.27
SMARCD3-208ENST00000472789 LINS1Q8NG48 757 aa13.34□□□□□ -0.27
SMARCD3-208ENST00000472789 ARHGAP45Q92619 1136 aa13.34□□□□□ -0.27
SMARCD3-208ENST00000472789 RPGRQ92834 1020 aaKnown RBP13.34□□□□□ -0.27
SMARCD3-208ENST00000472789 NLRP3Q96P20 1036 aa13.34□□□□□ -0.27
SMARCD3-208ENST00000472789 PDZRN3Q9UPQ7 1066 aa13.34□□□□□ -0.27
SMARCD3-208ENST00000472789 KIF13BQ9NQT8 1826 aa13.34□□□□□ -0.27
SMARCD3-208ENST00000472789 IRS4O14654 1257 aaPredicted RBP13.33□□□□□ -0.28
SMARCD3-208ENST00000472789 PCCAP05165 728 aaPredicted RBP13.33□□□□□ -0.28
SMARCD3-208ENST00000472789 KCNA3P22001 575 aa13.33□□□□□ -0.28
SMARCD3-208ENST00000472789 TTLL6Q8N841 843 aa13.33□□□□□ -0.28
SMARCD3-208ENST00000472789 ZBTB38Q8NAP3 1195 aaPredicted RBP13.33□□□□□ -0.28
SMARCD3-208ENST00000472789 MASTLQ96GX5 879 aa13.33□□□□□ -0.28
SMARCD3-208ENST00000472789 ZNF219Q9P2Y4 722 aaPredicted RBP13.33□□□□□ -0.28
SMARCD3-208ENST00000472789 ANKRD31Q8N7Z5 1873 aa13.32□□□□□ -0.28
SMARCD3-208ENST00000472789 KIF3CO14782 793 aa13.32□□□□□ -0.28
SMARCD3-208ENST00000472789 SRGNP10124 158 aa13.32□□□□□ -0.28
SMARCD3-208ENST00000472789 NPR1P16066 1061 aa13.32□□□□□ -0.28
SMARCD3-208ENST00000472789 GCKRQ14397 625 aa13.32□□□□□ -0.28
SMARCD3-208ENST00000472789 BEND3Q5T5X7 828 aa13.32□□□□□ -0.28
SMARCD3-208ENST00000472789 UBE3BQ7Z3V4 1068 aa13.32□□□□□ -0.28
SMARCD3-208ENST00000472789 FTSJ3Q8IY81 847 aaKnown RBP13.32□□□□□ -0.28
SMARCD3-208ENST00000472789 API5Q9BZZ5 524 aaKnown RBP13.32□□□□□ -0.28
SMARCD3-208ENST00000472789 SRCIN1Q9C0H9 1055 aa13.32□□□□□ -0.28
SMARCD3-208ENST00000472789 CHMP4BQ9H444 224 aaKnown RBP13.32□□□□□ -0.28
SMARCD3-208ENST00000472789 PLIN1O60240 522 aa13.31□□□□□ -0.28
SMARCD3-208ENST00000472789 HSP90B1P14625 803 aaKnown RBP13.31□□□□□ -0.28
SMARCD3-208ENST00000472789 AAMPQ13685 434 aa13.31□□□□□ -0.28
SMARCD3-208ENST00000472789 SLC10A5Q5PT55 438 aa13.31□□□□□ -0.28
SMARCD3-208ENST00000472789 STYK1Q6J9G0 422 aa13.31□□□□□ -0.28
SMARCD3-208ENST00000472789 C3orf67Q6ZVT6 689 aa13.31□□□□□ -0.28
SMARCD3-208ENST00000472789 CNKSR1Q969H4 720 aa13.31□□□□□ -0.28
SMARCD3-208ENST00000472789 C9orf78Q9NZ63 289 aaPredicted RBP13.31□□□□□ -0.28
SMARCD3-208ENST00000472789 ALDH1L1O75891 902 aa13.3□□□□□ -0.28
SMARCD3-208ENST00000472789 ATF7IPQ6VMQ6 1270 aa13.3□□□□□ -0.28
SMARCD3-208ENST00000472789 RBM17Q96I25 401 aaKnown RBP13.3□□□□□ -0.28
SMARCD3-208ENST00000472789 CCDC85AQ96PX6 553 aaPredicted RBP13.3□□□□□ -0.28
SMARCD3-208ENST00000472789 TNRC6CQ9HCJ0 1690 aaKnown RBP13.3□□□□□ -0.28
SMARCD3-208ENST00000472789 KIAA1551Q9HCM1 1747 aa13.3□□□□□ -0.28
SMARCD3-208ENST00000472789 KLRG2A4D1S0 409 aaPredicted RBP13.29□□□□□ -0.28
SMARCD3-208ENST00000472789 ALDH1B1P30837 517 aa13.29□□□□□ -0.28
SMARCD3-208ENST00000472789 IRX6P78412 446 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms