RNA–Protein interactions for RNA: ENST00000472696.1

EPHA4-212, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 531 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-212ENST00000472696 CLUAP1Q96AJ1 413 aa7.35□□□□□ -1.23
EPHA4-212ENST00000472696 SETDB2Q96T68 719 aa7.35□□□□□ -1.23
EPHA4-212ENST00000472696 MYD88Q99836 296 aa7.35□□□□□ -1.23
EPHA4-212ENST00000472696 ZBTB3Q9H5J0 574 aa7.35□□□□□ -1.23
EPHA4-212ENST00000472696 C9orf78Q9NZ63 289 aaPredicted RBP7.35□□□□□ -1.23
EPHA4-212ENST00000472696 TBC1D2BQ9UPU7 963 aa7.35□□□□□ -1.23
EPHA4-212ENST00000472696 COG6Q9Y2V7 657 aa7.35□□□□□ -1.23
EPHA4-212ENST00000472696 ZNF330Q9Y3S2 320 aaPredicted RBP7.35□□□□□ -1.23
EPHA4-212ENST00000472696 C4AP0C0L4 1744 aa7.35□□□□□ -1.23
EPHA4-212ENST00000472696 CDHR2Q9BYE9 1310 aa7.34□□□□□ -1.23
EPHA4-212ENST00000472696 H7C1W4 665 aa7.34□□□□□ -1.23
EPHA4-212ENST00000472696 GNAI2P04899 355 aa7.34□□□□□ -1.23
EPHA4-212ENST00000472696 PCCAP05165 728 aaPredicted RBP7.34□□□□□ -1.23
EPHA4-212ENST00000472696 IGKV5-2P06315 115 aa7.34□□□□□ -1.23
EPHA4-212ENST00000472696 UBTFL1P0CB47 393 aaPredicted RBP7.34□□□□□ -1.23
EPHA4-212ENST00000472696 PIP4K2AP48426 406 aaPredicted RBP7.34□□□□□ -1.23
EPHA4-212ENST00000472696 TPTE2Q6XPS3 522 aa7.34□□□□□ -1.23
EPHA4-212ENST00000472696 DEFB132Q7Z7B7 95 aa7.34□□□□□ -1.23
EPHA4-212ENST00000472696 PANK1Q8TE04 598 aa7.34□□□□□ -1.23
EPHA4-212ENST00000472696 PLA2G12BQ9BX93 195 aa7.34□□□□□ -1.23
EPHA4-212ENST00000472696 USP44Q9H0E7 712 aa7.34□□□□□ -1.23
EPHA4-212ENST00000472696 PDZRN3Q9UPQ7 1066 aa7.34□□□□□ -1.23
EPHA4-212ENST00000472696 RIC1Q4ADV7 1423 aa7.34□□□□□ -1.23
EPHA4-212ENST00000472696 AFDNP55196 1824 aaKnown RBP7.34□□□□□ -1.24
EPHA4-212ENST00000472696 CARMIL3Q8ND23 1372 aa7.33□□□□□ -1.24
EPHA4-212ENST00000472696 PNPLA7Q6ZV29 1317 aa7.33□□□□□ -1.24
EPHA4-212ENST00000472696 SH3TC1Q8TE82 1336 aa7.33□□□□□ -1.24
EPHA4-212ENST00000472696 HMMRO75330 724 aa7.33□□□□□ -1.24
EPHA4-212ENST00000472696 GYS1P13807 737 aa7.33□□□□□ -1.24
EPHA4-212ENST00000472696 KCNQ4P56696 695 aa7.33□□□□□ -1.24
EPHA4-212ENST00000472696 MTX1Q13505 466 aa7.33□□□□□ -1.24
EPHA4-212ENST00000472696 HLFQ16534 295 aa7.33□□□□□ -1.24
EPHA4-212ENST00000472696 ZNF827Q17R98 1081 aa7.33□□□□□ -1.24
EPHA4-212ENST00000472696 SLC10A5Q5PT55 438 aa7.33□□□□□ -1.24
EPHA4-212ENST00000472696 C20orf194Q5TEA3 1177 aa7.33□□□□□ -1.24
EPHA4-212ENST00000472696 USPL1Q5W0Q7 1092 aa7.33□□□□□ -1.24
EPHA4-212ENST00000472696 NLRP10Q86W26 655 aa7.33□□□□□ -1.24
EPHA4-212ENST00000472696 CRBNQ96SW2 442 aa7.33□□□□□ -1.24
EPHA4-212ENST00000472696 UTP14AQ9BVJ6 771 aaKnown RBP7.33□□□□□ -1.24
EPHA4-212ENST00000472696 PPP4R2Q9NY27 417 aa7.33□□□□□ -1.24
EPHA4-212ENST00000472696 NIP7Q9Y221 180 aaKnown RBP eCLIP7.33□□□□□ -1.24
EPHA4-212ENST00000472696 PDE8AO60658 829 aa7.32□□□□□ -1.24
EPHA4-212ENST00000472696 ATXN8OSP0DMR3 200 aa7.32□□□□□ -1.24
EPHA4-212ENST00000472696 TM4SF1P30408 202 aa7.32□□□□□ -1.24
EPHA4-212ENST00000472696 HDAC1Q13547 482 aaPredicted RBP7.32□□□□□ -1.24
EPHA4-212ENST00000472696 CWF19L2Q2TBE0 894 aaKnown RBP7.32□□□□□ -1.24
EPHA4-212ENST00000472696 RABL6Q3YEC7 729 aaPredicted RBP7.32□□□□□ -1.24
EPHA4-212ENST00000472696 COL23A1Q86Y22 540 aaPredicted RBP7.32□□□□□ -1.24
EPHA4-212ENST00000472696 SPRYD3Q8NCJ5 442 aa7.32□□□□□ -1.24
EPHA4-212ENST00000472696 RWDD1Q9H446 243 aaPredicted RBP7.32□□□□□ -1.24
EPHA4-212ENST00000472696 BCL2L12Q9HB09 334 aa7.32□□□□□ -1.24
EPHA4-212ENST00000472696 TRMT112Q9UI30 125 aaKnown RBP7.32□□□□□ -1.24
EPHA4-212ENST00000472696 COL24A1Q17RW2 1714 aa7.32□□□□□ -1.24
EPHA4-212ENST00000472696 ATP5J2-PTCD1G3V325 749 aa7.31□□□□□ -1.24
EPHA4-212ENST00000472696 PHF14O94880 888 aa7.31□□□□□ -1.24
EPHA4-212ENST00000472696 CASP7P55210 303 aa7.31□□□□□ -1.24
EPHA4-212ENST00000472696 ATP8B2P98198 1209 aa7.31□□□□□ -1.24
EPHA4-212ENST00000472696 HSP90AB4PQ58FF6 505 aa7.31□□□□□ -1.24
EPHA4-212ENST00000472696 TBC1D9BQ66K14 1250 aa7.31□□□□□ -1.24
EPHA4-212ENST00000472696 ANKRD44Q8N8A2 993 aa7.31□□□□□ -1.24
EPHA4-212ENST00000472696 EXOC6Q8TAG9 804 aa7.31□□□□□ -1.24
EPHA4-212ENST00000472696 CNKSR2Q8WXI2 1034 aa7.31□□□□□ -1.24
EPHA4-212ENST00000472696 GCC1Q96CN9 775 aa7.31□□□□□ -1.24
EPHA4-212ENST00000472696 MEIS3Q99687 375 aa7.31□□□□□ -1.24
EPHA4-212ENST00000472696 TUBGCP6Q96RT7 1819 aa7.31□□□□□ -1.24
EPHA4-212ENST00000472696 RTL9Q8NET4 1388 aa7.31□□□□□ -1.24
EPHA4-212ENST00000472696 UBN2Q6ZU65 1347 aa7.3□□□□□ -1.24
EPHA4-212ENST00000472696 NTSR2O95665 410 aa7.3□□□□□ -1.24
EPHA4-212ENST00000472696 CSF1RP07333 972 aa7.3□□□□□ -1.24
EPHA4-212ENST00000472696 NBPF7P0C2Y1 421 aaPredicted RBP7.3□□□□□ -1.24
EPHA4-212ENST00000472696 GTF2E1P29083 439 aaPredicted RBP7.3□□□□□ -1.24
EPHA4-212ENST00000472696 ST5P78524 1137 aa7.3□□□□□ -1.24
EPHA4-212ENST00000472696 NFIXQ14938 502 aa7.3□□□□□ -1.24
EPHA4-212ENST00000472696 SF3B3Q15393 1217 aaKnown RBP7.3□□□□□ -1.24
EPHA4-212ENST00000472696 SUSD4Q5VX71 490 aa7.3□□□□□ -1.24
EPHA4-212ENST00000472696 NBPF5PQ86XG9 351 aaPredicted RBP7.3□□□□□ -1.24
EPHA4-212ENST00000472696 NLRP3Q96P20 1036 aa7.3□□□□□ -1.24
EPHA4-212ENST00000472696 MTFR1LQ9H019 292 aa7.3□□□□□ -1.24
EPHA4-212ENST00000472696 ANO8Q9HCE9 1232 aaPredicted RBP7.3□□□□□ -1.24
EPHA4-212ENST00000472696 TNNQ9UQP3 1299 aa7.3□□□□□ -1.24
EPHA4-212ENST00000472696 PARP3Q9Y6F1 533 aa7.3□□□□□ -1.24
EPHA4-212ENST00000472696 MYH3P11055 1940 aa7.3□□□□□ -1.24
EPHA4-212ENST00000472696 LAMB2P55268 1798 aa7.3□□□□□ -1.24
EPHA4-212ENST00000472696 NRXN2Q9P2S2 1712 aa7.3□□□□□ -1.24
EPHA4-212ENST00000472696 KLRG2A4D1S0 409 aaPredicted RBP7.29□□□□□ -1.24
EPHA4-212ENST00000472696 POLRMTO00411 1230 aaKnown RBP7.29□□□□□ -1.24
EPHA4-212ENST00000472696 IRS4O14654 1257 aaPredicted RBP7.29□□□□□ -1.24
EPHA4-212ENST00000472696 SERPINB2P05120 415 aa7.29□□□□□ -1.24
EPHA4-212ENST00000472696 GPTP24298 496 aa7.29□□□□□ -1.24
EPHA4-212ENST00000472696 CCDC152Q4G0S7 254 aa7.29□□□□□ -1.24
EPHA4-212ENST00000472696 CEP85Q6P2H3 762 aa7.29□□□□□ -1.24
EPHA4-212ENST00000472696 ILDR2Q71H61 639 aa7.29□□□□□ -1.24
EPHA4-212ENST00000472696 UBE3BQ7Z3V4 1068 aa7.29□□□□□ -1.24
EPHA4-212ENST00000472696 AMIGO3Q86WK7 504 aa7.29□□□□□ -1.24
EPHA4-212ENST00000472696 CNBD1Q8NA66 436 aa7.29□□□□□ -1.24
EPHA4-212ENST00000472696 SSH3Q8TE77 659 aa7.29□□□□□ -1.24
EPHA4-212ENST00000472696 CCDC136Q96JN2 1154 aa7.29□□□□□ -1.24
EPHA4-212ENST00000472696 BRIP1Q9BX63 1249 aa7.29□□□□□ -1.24
EPHA4-212ENST00000472696 SRP68Q9UHB9 627 aaKnown RBP7.29□□□□□ -1.24
EPHA4-212ENST00000472696 NPHP1O15259 732 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms