RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 CFHR5Q9BXR6 569 aa10.35□□□□□ -0.75
CLK1-209ENST00000472679 ATXN7L1Q9ULK2 861 aaPredicted RBP10.35□□□□□ -0.75
CLK1-209ENST00000472679 ARHGAP4P98171 946 aa10.34□□□□□ -0.75
CLK1-209ENST00000472679 CTBSQ01459 385 aa10.34□□□□□ -0.75
CLK1-209ENST00000472679 RNFT1Q5M7Z0 435 aa10.34□□□□□ -0.75
CLK1-209ENST00000472679 IRF7Q92985 503 aa10.34□□□□□ -0.75
CLK1-209ENST00000472679 GZF1Q9H116 711 aaPredicted RBP10.34□□□□□ -0.75
CLK1-209ENST00000472679 CD33P20138 364 aa10.33□□□□□ -0.76
CLK1-209ENST00000472679 ARSDP51689 593 aa10.33□□□□□ -0.76
CLK1-209ENST00000472679 RGL4Q8IZJ4 473 aa10.33□□□□□ -0.76
CLK1-209ENST00000472679 GPR152Q8TDT2 470 aa10.33□□□□□ -0.76
CLK1-209ENST00000472679 COL25A1Q9BXS0 654 aaPredicted RBP10.33□□□□□ -0.76
CLK1-209ENST00000472679 WFS1O76024 890 aa10.32□□□□□ -0.76
CLK1-209ENST00000472679 FGFR3P22607 806 aa10.32□□□□□ -0.76
CLK1-209ENST00000472679 KRT76Q01546 638 aa10.32□□□□□ -0.76
CLK1-209ENST00000472679 PHF24Q9UPV7 400 aa10.32□□□□□ -0.76
CLK1-209ENST00000472679 RTCBQ9Y3I0 505 aaKnown RBP10.32□□□□□ -0.76
CLK1-209ENST00000472679 ZBTB7CA1YPR0 619 aa10.31□□□□□ -0.76
CLK1-209ENST00000472679 C2CD2LO14523 706 aa10.31□□□□□ -0.76
CLK1-209ENST00000472679 FZD6O60353 706 aa10.31□□□□□ -0.76
CLK1-209ENST00000472679 KCNQ4P56696 695 aa10.31□□□□□ -0.76
CLK1-209ENST00000472679 CCDC87Q9NVE4 849 aa10.31□□□□□ -0.76
CLK1-209ENST00000472679 MARK1Q9P0L2 795 aa10.31□□□□□ -0.76
CLK1-209ENST00000472679 BIN2Q9UBW5 565 aaPredicted RBP10.31□□□□□ -0.76
CLK1-209ENST00000472679 KCNH4Q9UQ05 1017 aa10.31□□□□□ -0.76
CLK1-209ENST00000472679 AAMPQ13685 434 aa10.3□□□□□ -0.76
CLK1-209ENST00000472679 LAMC2Q13753 1193 aa10.3□□□□□ -0.76
CLK1-209ENST00000472679 TREML4Q6UXN2 200 aa10.3□□□□□ -0.76
CLK1-209ENST00000472679 EDEM1Q92611 657 aa10.3□□□□□ -0.76
CLK1-209ENST00000472679 GMPRP36959 345 aa10.29□□□□□ -0.76
CLK1-209ENST00000472679 DNM1Q05193 864 aaKnown RBP10.29□□□□□ -0.76
CLK1-209ENST00000472679 LCE2AQ5TA79 106 aaPredicted RBP10.29□□□□□ -0.76
CLK1-209ENST00000472679 ALKBH2Q6NS38 261 aa10.29□□□□□ -0.76
CLK1-209ENST00000472679 CMTR1Q8N1G2 835 aaKnown RBP10.29□□□□□ -0.76
CLK1-209ENST00000472679 SLC30A3Q99726 388 aa10.29□□□□□ -0.76
CLK1-209ENST00000472679 KCNMB2Q9Y691 235 aa10.29□□□□□ -0.76
CLK1-209ENST00000472679 MX2P20592 715 aa10.28□□□□□ -0.76
CLK1-209ENST00000472679 TRIP4Q15650 581 aaPredicted RBP10.28□□□□□ -0.76
CLK1-209ENST00000472679 SND1Q7KZF4 910 aaKnown RBP eCLIP10.28□□□□□ -0.76
CLK1-209ENST00000472679 NUDT16Q96DE0 195 aaKnown RBP10.28□□□□□ -0.76
CLK1-209ENST00000472679 POLIQ9UNA4 740 aa10.28□□□□□ -0.76
CLK1-209ENST00000472679 PDGFAP04085 211 aa10.27□□□□□ -0.77
CLK1-209ENST00000472679 EPB42P16452 691 aa10.27□□□□□ -0.77
CLK1-209ENST00000472679 PIK3R5Q8WYR1 880 aa10.27□□□□□ -0.77
CLK1-209ENST00000472679 CNTNAP3BQ96NU0 1288 aa10.27□□□□□ -0.77
CLK1-209ENST00000472679 CNTNAP3Q9BZ76 1288 aa10.27□□□□□ -0.77
CLK1-209ENST00000472679 MZF1P28698 734 aaPredicted RBP10.26□□□□□ -0.77
CLK1-209ENST00000472679 SPEM2Q0P670 501 aa10.26□□□□□ -0.77
CLK1-209ENST00000472679 FAM182BQ5T319 152 aa10.26□□□□□ -0.77
CLK1-209ENST00000472679 RAB44Q7Z6P3 723 aaPredicted RBP10.26□□□□□ -0.77
CLK1-209ENST00000472679 GSX2Q9BZM3 304 aa10.26□□□□□ -0.77
CLK1-209ENST00000472679 GGNBP2Q9H3C7 697 aa10.26□□□□□ -0.77
CLK1-209ENST00000472679 MBIPQ9NS73 344 aa10.26□□□□□ -0.77
CLK1-209ENST00000472679 BMP4P12644 408 aa10.25□□□□□ -0.77
CLK1-209ENST00000472679 FAM13BQ9NYF5 915 aa10.25□□□□□ -0.77
CLK1-209ENST00000472679 A6NHS1 94 aa10.24□□□□□ -0.77
CLK1-209ENST00000472679 XYLBO75191 536 aa10.24□□□□□ -0.77
CLK1-209ENST00000472679 BRPF3Q9ULD4 1205 aa10.24□□□□□ -0.77
CLK1-209ENST00000472679 IGF1RP08069 1367 aa10.24□□□□□ -0.77
CLK1-209ENST00000472679 SASH3O75995 380 aa10.23□□□□□ -0.77
CLK1-209ENST00000472679 CCINQ13939 588 aa10.23□□□□□ -0.77
CLK1-209ENST00000472679 KRT25Q7Z3Z0 450 aa10.23□□□□□ -0.77
CLK1-209ENST00000472679 UBAP1LF5GYI3 381 aa10.22□□□□□ -0.77
CLK1-209ENST00000472679 EGFRP00533 1210 aa10.22□□□□□ -0.77
CLK1-209ENST00000472679 TARSP26639 723 aaKnown RBP10.22□□□□□ -0.77
CLK1-209ENST00000472679 C8orf34Q49A92 452 aa10.21□□□□□ -0.77
CLK1-209ENST00000472679 GJD3Q8N144 294 aa10.21□□□□□ -0.77
CLK1-209ENST00000472679 BHMTQ93088 406 aa10.21□□□□□ -0.77
CLK1-209ENST00000472679 ZFATQ9P243 1243 aa10.21□□□□□ -0.77
CLK1-209ENST00000472679 KLF15Q9UIH9 416 aa10.21□□□□□ -0.77
CLK1-209ENST00000472679 PRR12Q9ULL5 1215 aa10.21□□□□□ -0.77
CLK1-209ENST00000472679 NDUFB5O43674 189 aa10.2□□□□□ -0.78
CLK1-209ENST00000472679 ADAMTS2O95450 1211 aa10.2□□□□□ -0.78
CLK1-209ENST00000472679 NFKB1P19838 968 aa10.2□□□□□ -0.78
CLK1-209ENST00000472679 PCBP4P57723 403 aaKnown RBP10.2□□□□□ -0.78
CLK1-209ENST00000472679 SRSF11Q05519 484 aaKnown RBP10.2□□□□□ -0.78
CLK1-209ENST00000472679 C11orf16Q9NQ32 467 aa10.2□□□□□ -0.78
CLK1-209ENST00000472679 DCTN4Q9UJW0 460 aa10.2□□□□□ -0.78
CLK1-209ENST00000472679 PCSK2P16519 638 aa10.19□□□□□ -0.78
CLK1-209ENST00000472679 MAPK1P28482 360 aa10.19□□□□□ -0.78
CLK1-209ENST00000472679 MARSP56192 900 aaKnown RBP10.19□□□□□ -0.78
CLK1-209ENST00000472679 ZNF468Q5VIY5 522 aaPredicted RBP10.19□□□□□ -0.78
CLK1-209ENST00000472679 SYT9Q86SS6 491 aa10.19□□□□□ -0.78
CLK1-209ENST00000472679 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.19□□□□□ -0.78
CLK1-209ENST00000472679 MAP2K3P46734 347 aa10.18□□□□□ -0.78
CLK1-209ENST00000472679 RBCK1Q9BYM8 510 aa10.18□□□□□ -0.78
CLK1-209ENST00000472679 NSFL1CQ9UNZ2 370 aaKnown RBP10.18□□□□□ -0.78
CLK1-209ENST00000472679 FNDC3AQ9Y2H6 1198 aaKnown RBP10.18□□□□□ -0.78
CLK1-209ENST00000472679 IGHA2P01877 340 aa10.17□□□□□ -0.78
CLK1-209ENST00000472679 USP5P45974 858 aa10.17□□□□□ -0.78
CLK1-209ENST00000472679 NLRP13Q86W25 1043 aa10.17□□□□□ -0.78
CLK1-209ENST00000472679 ACDQ96AP0 544 aa10.17□□□□□ -0.78
CLK1-209ENST00000472679 PNMA5Q96PV4 448 aa10.17□□□□□ -0.78
CLK1-209ENST00000472679 FAM129BQ96TA1 746 aa10.17□□□□□ -0.78
CLK1-209ENST00000472679 ELP3Q9H9T3 547 aa10.17□□□□□ -0.78
CLK1-209ENST00000472679 TMEM63CQ9P1W3 806 aa10.17□□□□□ -0.78
CLK1-209ENST00000472679 NEURL1BA8MQ27 555 aa10.16□□□□□ -0.78
CLK1-209ENST00000472679 RPLP1P05386 114 aaKnown RBP10.16□□□□□ -0.78
CLK1-209ENST00000472679 SLURP2P0DP57 97 aa10.16□□□□□ -0.78
CLK1-209ENST00000472679 RARAP10276 462 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms