RNA–Protein interactions for RNA: ENST00000472577.1

PKD1-208, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 1,140 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-208ENST00000472577 SMC1BQ8NDV3 1235 aa22.09■■□□□ 1.13
PKD1-208ENST00000472577 CACNA1SQ13698 1873 aa22.09■■□□□ 1.13
PKD1-208ENST00000472577 FER1L6Q2WGJ9 1857 aa22.09■■□□□ 1.13
PKD1-208ENST00000472577 GLTPD2A6NH11 291 aa22.08■■□□□ 1.13
PKD1-208ENST00000472577 SLC4A2P04920 1241 aa22.08■■□□□ 1.13
PKD1-208ENST00000472577 GIGYF2Q6Y7W6 1299 aaKnown RBP22.07■■□□□ 1.12
PKD1-208ENST00000472577 G2E3Q7L622 706 aa22.07■■□□□ 1.12
PKD1-208ENST00000472577 ZNF219Q9P2Y4 722 aaPredicted RBP22.07■■□□□ 1.12
PKD1-208ENST00000472577 PLBD2Q8NHP8 589 aa22.06■■□□□ 1.12
PKD1-208ENST00000472577 ZNF622Q969S3 477 aaKnown RBP eCLIP22.06■■□□□ 1.12
PKD1-208ENST00000472577 C21orf2O43822 256 aa22.05■■□□□ 1.12
PKD1-208ENST00000472577 ANKRD13DQ6ZTN6 518 aa22.05■■□□□ 1.12
PKD1-208ENST00000472577 SETDB2Q96T68 719 aa22.05■■□□□ 1.12
PKD1-208ENST00000472577 NIP7Q9Y221 180 aaKnown RBP eCLIP22.05■■□□□ 1.12
PKD1-208ENST00000472577 DICER1Q9UPY3 1922 aaKnown RBP22.05■■□□□ 1.12
PKD1-208ENST00000472577 ARFGEF2Q9Y6D5 1785 aa22.04■■□□□ 1.12
PKD1-208ENST00000472577 SLX4Q8IY92 1834 aa22.04■■□□□ 1.12
PKD1-208ENST00000472577 POTECB2RU33 542 aa22.04■■□□□ 1.12
PKD1-208ENST00000472577 VEGFAP15692 232 aaPredicted RBP22.04■■□□□ 1.12
PKD1-208ENST00000472577 BRIP1Q9BX63 1249 aa22.04■■□□□ 1.12
PKD1-208ENST00000472577 CACNA1FO60840 1977 aa22.04■■□□□ 1.12
PKD1-208ENST00000472577 ANKRD36CQ5JPF3 1778 aa22.04■■□□□ 1.12
PKD1-208ENST00000472577 GPTP24298 496 aa22.03■■□□□ 1.12
PKD1-208ENST00000472577 COL13A1Q5TAT6 717 aaPredicted RBP22.03■■□□□ 1.12
PKD1-208ENST00000472577 ZNF34Q8IZ26 560 aa22.03■■□□□ 1.12
PKD1-208ENST00000472577 PDE6BP35913 854 aa22.02■■□□□ 1.12
PKD1-208ENST00000472577 PCNTO95613 3336 aa22.02■■□□□ 1.12
PKD1-208ENST00000472577 UBN2Q6ZU65 1347 aa22.02■■□□□ 1.12
PKD1-208ENST00000472577 CT47B1P0C2W7 299 aaPredicted RBP22.01■■□□□ 1.11
PKD1-208ENST00000472577 FLIIQ13045 1269 aa22.01■■□□□ 1.11
PKD1-208ENST00000472577 TCIRG1Q13488 830 aa22.01■■□□□ 1.11
PKD1-208ENST00000472577 RIC3Q7Z5B4 369 aa22.01■■□□□ 1.11
PKD1-208ENST00000472577 CNBD1Q8NA66 436 aa22.01■■□□□ 1.11
PKD1-208ENST00000472577 SSH1Q8WYL5 1049 aa22.01■■□□□ 1.11
PKD1-208ENST00000472577 ZNF428Q96B54 188 aa22.01■■□□□ 1.11
PKD1-208ENST00000472577 DDX58O95786 925 aaKnown RBP22■■□□□ 1.11
PKD1-208ENST00000472577 HSP90AB3PQ58FF7 597 aa22■■□□□ 1.11
PKD1-208ENST00000472577 MRPL50Q8N5N7 158 aaKnown RBP22■■□□□ 1.11
PKD1-208ENST00000472577 FAM177BA6PVY3 158 aa21.99■■□□□ 1.11
PKD1-208ENST00000472577 KSR2Q6VAB6 950 aa21.99■■□□□ 1.11
PKD1-208ENST00000472577 YTHDC1Q96MU7 727 aaKnown RBP21.99■■□□□ 1.11
PKD1-208ENST00000472577 BCL2L13Q9BXK5 485 aa21.99■■□□□ 1.11
PKD1-208ENST00000472577 PI4KAP2A4QPH2 592 aa21.98■■□□□ 1.11
PKD1-208ENST00000472577 ALDH1L2Q3SY69 923 aa21.98■■□□□ 1.11
PKD1-208ENST00000472577 ERFEQ4G0M1 354 aa21.98■■□□□ 1.11
PKD1-208ENST00000472577 SUSD4Q5VX71 490 aa21.98■■□□□ 1.11
PKD1-208ENST00000472577 PRPF40BQ6NWY9 871 aaKnown RBP21.98■■□□□ 1.11
PKD1-208ENST00000472577 NBPF5PQ86XG9 351 aaPredicted RBP21.98■■□□□ 1.11
PKD1-208ENST00000472577 PI4KAP1Q8N8J0 262 aa21.98■■□□□ 1.11
PKD1-208ENST00000472577 MAP3K2Q9Y2U5 619 aa21.98■■□□□ 1.11
PKD1-208ENST00000472577 LTBP3Q9NS15 1303 aa21.98■■□□□ 1.11
PKD1-208ENST00000472577 SRGNP10124 158 aa21.97■■□□□ 1.11
PKD1-208ENST00000472577 FKBP5Q13451 457 aaPredicted RBP21.97■■□□□ 1.11
PKD1-208ENST00000472577 ISCA1Q9BUE6 129 aa21.97■■□□□ 1.11
PKD1-208ENST00000472577 TAOK3Q9H2K8 898 aa21.97■■□□□ 1.11
PKD1-208ENST00000472577 PDZRN3Q9UPQ7 1066 aa21.97■■□□□ 1.11
PKD1-208ENST00000472577 ATP5J2-PTCD1G3V325 749 aa21.96■■□□□ 1.11
PKD1-208ENST00000472577 PARP10Q53GL7 1025 aa21.96■■□□□ 1.11
PKD1-208ENST00000472577 NLRP10Q86W26 655 aa21.96■■□□□ 1.11
PKD1-208ENST00000472577 MYD88Q99836 296 aa21.96■■□□□ 1.11
PKD1-208ENST00000472577 METTL22Q9BUU2 404 aaPredicted RBP21.96■■□□□ 1.11
PKD1-208ENST00000472577 NPHP1O15259 732 aa21.95■■□□□ 1.1
PKD1-208ENST00000472577 POTEIP0CG38 1075 aa21.95■■□□□ 1.1
PKD1-208ENST00000472577 POTEJP0CG39 1038 aa21.95■■□□□ 1.1
PKD1-208ENST00000472577 RARSP54136 660 aaKnown RBP21.95■■□□□ 1.1
PKD1-208ENST00000472577 ST5P78524 1137 aa21.95■■□□□ 1.1
PKD1-208ENST00000472577 STYK1Q6J9G0 422 aa21.95■■□□□ 1.1
PKD1-208ENST00000472577 TPTE2Q6XPS3 522 aa21.95■■□□□ 1.1
PKD1-208ENST00000472577 SMC4Q9NTJ3 1288 aa21.95■■□□□ 1.1
PKD1-208ENST00000472577 IBTKQ9P2D0 1353 aaPredicted RBP21.95■■□□□ 1.1
PKD1-208ENST00000472577 NTSR2O95665 410 aa21.94■■□□□ 1.1
PKD1-208ENST00000472577 DPY19L2Q6NUT2 758 aa21.94■■□□□ 1.1
PKD1-208ENST00000472577 NUTM1Q86Y26 1132 aa21.94■■□□□ 1.1
PKD1-208ENST00000472577 DDNO94850 711 aaPredicted RBP21.93■■□□□ 1.1
PKD1-208ENST00000472577 PPP1R42Q7Z4L9 355 aa21.93■■□□□ 1.1
PKD1-208ENST00000472577 CNKSR1Q969H4 720 aa21.93■■□□□ 1.1
PKD1-208ENST00000472577 NYXQ9GZU5 481 aa21.93■■□□□ 1.1
PKD1-208ENST00000472577 ABCC12Q96J65 1359 aa21.92■■□□□ 1.1
PKD1-208ENST00000472577 F6X3S4 739 aa21.92■■□□□ 1.1
PKD1-208ENST00000472577 TRIM28Q13263 835 aaKnown RBP21.92■■□□□ 1.1
PKD1-208ENST00000472577 DNAAF4Q8WXU2 420 aa21.92■■□□□ 1.1
PKD1-208ENST00000472577 MASTLQ96GX5 879 aa21.92■■□□□ 1.1
PKD1-208ENST00000472577 UTP14AQ9BVJ6 771 aaKnown RBP21.92■■□□□ 1.1
PKD1-208ENST00000472577 IGKV5-2P06315 115 aa21.91■■□□□ 1.1
PKD1-208ENST00000472577 HSPA1AP0DMV8 641 aaKnown RBP21.91■■□□□ 1.1
PKD1-208ENST00000472577 HSPA1BP0DMV9 641 aaKnown RBP21.91■■□□□ 1.1
PKD1-208ENST00000472577 C7orf43Q8WVR3 580 aa21.91■■□□□ 1.1
PKD1-208ENST00000472577 GTF2E1P29083 439 aaPredicted RBP21.9■■□□□ 1.1
PKD1-208ENST00000472577 BRPF1P55201 1214 aaPredicted RBP21.9■■□□□ 1.1
PKD1-208ENST00000472577 OLFM4Q6UX06 510 aa21.9■■□□□ 1.1
PKD1-208ENST00000472577 PTPRCP08575 1304 aa21.89■■□□□ 1.1
PKD1-208ENST00000472577 CWF19L2Q2TBE0 894 aaKnown RBP21.89■■□□□ 1.09
PKD1-208ENST00000472577 SYNE4Q8N205 404 aa21.89■■□□□ 1.09
PKD1-208ENST00000472577 TRMT112Q9UI30 125 aaKnown RBP21.89■■□□□ 1.09
PKD1-208ENST00000472577 BCAR3O75815 825 aa21.88■■□□□ 1.09
PKD1-208ENST00000472577 NEXNQ0ZGT2 675 aa21.88■■□□□ 1.09
PKD1-208ENST00000472577 CHADLQ6NUI6 762 aa21.88■■□□□ 1.09
PKD1-208ENST00000472577 CCDC191Q8NCU4 936 aa21.88■■□□□ 1.09
PKD1-208ENST00000472577 RNF123Q5XPI4 1314 aa21.87■■□□□ 1.09
PKD1-208ENST00000472577 NEURL1BA8MQ27 555 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms