RNA–Protein interactions for RNA: ENST00000472548.5

ITSN1-225, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 529 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-225ENST00000472548 PHACTR3Q96KR7 559 aa9.31□□□□□ -0.92
ITSN1-225ENST00000472548 BOLA1Q9Y3E2 137 aa9.31□□□□□ -0.92
ITSN1-225ENST00000472548 CEMIPQ8WUJ3 1361 aa9.31□□□□□ -0.92
ITSN1-225ENST00000472548 PRAMEF22A3QJZ6 481 aa9.3□□□□□ -0.92
ITSN1-225ENST00000472548 GNAT3A8MTJ3 354 aa9.3□□□□□ -0.92
ITSN1-225ENST00000472548 U2SURPO15042 1029 aaKnown RBP9.3□□□□□ -0.92
ITSN1-225ENST00000472548 C21orf2O43822 256 aa9.3□□□□□ -0.92
ITSN1-225ENST00000472548 CAMTA2O94983 1202 aa9.3□□□□□ -0.92
ITSN1-225ENST00000472548 STARD3NLO95772 234 aa9.3□□□□□ -0.92
ITSN1-225ENST00000472548 PIP4K2AP48426 406 aaPredicted RBP9.3□□□□□ -0.92
ITSN1-225ENST00000472548 TTC5Q8N0Z6 440 aa9.3□□□□□ -0.92
ITSN1-225ENST00000472548 ZNF330Q9Y3S2 320 aaPredicted RBP9.3□□□□□ -0.92
ITSN1-225ENST00000472548 NPC1L1Q9UHC9 1359 aa9.29□□□□□ -0.92
ITSN1-225ENST00000472548 POTEJP0CG39 1038 aa9.29□□□□□ -0.92
ITSN1-225ENST00000472548 TEFQ10587 303 aa9.29□□□□□ -0.92
ITSN1-225ENST00000472548 ZNF622Q969S3 477 aaKnown RBP eCLIP9.29□□□□□ -0.92
ITSN1-225ENST00000472548 BRIP1Q9BX63 1249 aa9.29□□□□□ -0.92
ITSN1-225ENST00000472548 USP16Q9Y5T5 823 aa9.29□□□□□ -0.92
ITSN1-225ENST00000472548 IL6STP40189 918 aaPredicted RBP9.28□□□□□ -0.92
ITSN1-225ENST00000472548 RSPH6AQ9H0K4 717 aa9.28□□□□□ -0.92
ITSN1-225ENST00000472548 DLG5Q8TDM6 1919 aa9.28□□□□□ -0.92
ITSN1-225ENST00000472548 A0A087WZG4 1122 aa9.27□□□□□ -0.93
ITSN1-225ENST00000472548 SRGNP10124 158 aa9.27□□□□□ -0.93
ITSN1-225ENST00000472548 PRKAR2BP31323 418 aa9.27□□□□□ -0.93
ITSN1-225ENST00000472548 PDE6BP35913 854 aa9.27□□□□□ -0.93
ITSN1-225ENST00000472548 ERFEQ4G0M1 354 aa9.27□□□□□ -0.93
ITSN1-225ENST00000472548 C3orf67Q6ZVT6 689 aa9.27□□□□□ -0.93
ITSN1-225ENST00000472548 GAS2L2Q8NHY3 880 aa9.27□□□□□ -0.93
ITSN1-225ENST00000472548 FMNL2Q96PY5 1086 aa9.27□□□□□ -0.93
ITSN1-225ENST00000472548 TEX13AQ9BXU3 409 aaPredicted RBP9.27□□□□□ -0.93
ITSN1-225ENST00000472548 LTBP3Q9NS15 1303 aa9.27□□□□□ -0.93
ITSN1-225ENST00000472548 BTBD11A6QL63 1104 aa9.26□□□□□ -0.93
ITSN1-225ENST00000472548 GTPBP6O43824 516 aaPredicted RBP9.26□□□□□ -0.93
ITSN1-225ENST00000472548 DDNO94850 711 aaPredicted RBP9.26□□□□□ -0.93
ITSN1-225ENST00000472548 PRPF40BQ6NWY9 871 aaKnown RBP9.26□□□□□ -0.93
ITSN1-225ENST00000472548 DZIP3Q86Y13 1208 aaKnown RBP9.26□□□□□ -0.93
ITSN1-225ENST00000472548 CNBD1Q8NA66 436 aa9.26□□□□□ -0.93
ITSN1-225ENST00000472548 C7orf43Q8WVR3 580 aa9.26□□□□□ -0.93
ITSN1-225ENST00000472548 SETDB2Q96T68 719 aa9.26□□□□□ -0.93
ITSN1-225ENST00000472548 TMEM121BQ9BXQ6 578 aaPredicted RBP9.26□□□□□ -0.93
ITSN1-225ENST00000472548 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.26□□□□□ -0.93
ITSN1-225ENST00000472548 SCN4AP35499 1836 aa9.26□□□□□ -0.93
ITSN1-225ENST00000472548 NUP98P52948 1817 aa9.26□□□□□ -0.93
ITSN1-225ENST00000472548 LAMB4A4D0S4 1761 aa9.25□□□□□ -0.93
ITSN1-225ENST00000472548 ADAMTSL1Q8N6G6 1762 aa9.25□□□□□ -0.93
ITSN1-225ENST00000472548 NBPF26B4DH59 902 aa9.25□□□□□ -0.93
ITSN1-225ENST00000472548 HSPA1AP0DMV8 641 aaKnown RBP9.25□□□□□ -0.93
ITSN1-225ENST00000472548 HSPA1BP0DMV9 641 aaKnown RBP9.25□□□□□ -0.93
ITSN1-225ENST00000472548 DCTN1Q14203 1278 aa9.25□□□□□ -0.93
ITSN1-225ENST00000472548 STYK1Q6J9G0 422 aa9.25□□□□□ -0.93
ITSN1-225ENST00000472548 NBPF10Q6P3W6 841 aaKnown RBP9.25□□□□□ -0.93
ITSN1-225ENST00000472548 OLFM4Q6UX06 510 aa9.25□□□□□ -0.93
ITSN1-225ENST00000472548 MCM10Q7L590 875 aa9.25□□□□□ -0.93
ITSN1-225ENST00000472548 MICALL2Q8IY33 904 aa9.25□□□□□ -0.93
ITSN1-225ENST00000472548 NBPF15Q8N660 670 aa9.25□□□□□ -0.93
ITSN1-225ENST00000472548 TAOK3Q9H2K8 898 aa9.25□□□□□ -0.93
ITSN1-225ENST00000472548 PDZRN3Q9UPQ7 1066 aa9.25□□□□□ -0.93
ITSN1-225ENST00000472548 KLRG2A4D1S0 409 aaPredicted RBP9.24□□□□□ -0.93
ITSN1-225ENST00000472548 SPRYD3Q8NCJ5 442 aa9.24□□□□□ -0.93
ITSN1-225ENST00000472548 CNKSR1Q969H4 720 aa9.24□□□□□ -0.93
ITSN1-225ENST00000472548 OTUD5Q96G74 571 aa9.24□□□□□ -0.93
ITSN1-225ENST00000472548 MASTLQ96GX5 879 aa9.24□□□□□ -0.93
ITSN1-225ENST00000472548 KDM3BQ7LBC6 1761 aa9.24□□□□□ -0.93
ITSN1-225ENST00000472548 COL4A5P29400 1685 aa9.23□□□□□ -0.93
ITSN1-225ENST00000472548 ST5P78524 1137 aa9.23□□□□□ -0.93
ITSN1-225ENST00000472548 HLFQ16534 295 aa9.23□□□□□ -0.93
ITSN1-225ENST00000472548 TNS4Q8IZW8 715 aa9.23□□□□□ -0.93
ITSN1-225ENST00000472548 SNED1Q8TER0 1413 aa9.22□□□□□ -0.93
ITSN1-225ENST00000472548 NPHP1O15259 732 aa9.22□□□□□ -0.93
ITSN1-225ENST00000472548 PPP1R37O75864 691 aa9.22□□□□□ -0.93
ITSN1-225ENST00000472548 SNRPA1P09661 255 aaKnown RBP9.22□□□□□ -0.93
ITSN1-225ENST00000472548 PPP2R1AP30153 589 aa9.22□□□□□ -0.93
ITSN1-225ENST00000472548 CLEC4GQ6UXB4 293 aa9.22□□□□□ -0.93
ITSN1-225ENST00000472548 SLC51AQ86UW1 340 aa9.22□□□□□ -0.93
ITSN1-225ENST00000472548 NBPF5PQ86XG9 351 aaPredicted RBP9.22□□□□□ -0.93
ITSN1-225ENST00000472548 MIS18AQ9NYP9 233 aa9.22□□□□□ -0.93
ITSN1-225ENST00000472548 MKRN1Q9UHC7 482 aaKnown RBP9.22□□□□□ -0.93
ITSN1-225ENST00000472548 PASKQ96RG2 1323 aa9.22□□□□□ -0.93
ITSN1-225ENST00000472548 ZNF541Q9H0D2 1346 aa9.22□□□□□ -0.93
ITSN1-225ENST00000472548 LTBP1Q14766 1721 aa9.22□□□□□ -0.93
ITSN1-225ENST00000472548 FAM177BA6PVY3 158 aa9.21□□□□□ -0.94
ITSN1-225ENST00000472548 ITGBL1O95965 494 aaPredicted RBP9.21□□□□□ -0.94
ITSN1-225ENST00000472548 NPR1P16066 1061 aa9.21□□□□□ -0.94
ITSN1-225ENST00000472548 TAF1DQ9H5J8 278 aaPredicted RBP9.21□□□□□ -0.94
ITSN1-225ENST00000472548 ZNF277Q9NRM2 450 aaPredicted RBP9.21□□□□□ -0.94
ITSN1-225ENST00000472548 NIP7Q9Y221 180 aaKnown RBP eCLIP9.21□□□□□ -0.94
ITSN1-225ENST00000472548 U2AF1L5P0DN76 240 aaPredicted RBP9.2□□□□□ -0.94
ITSN1-225ENST00000472548 U2AF1Q01081 240 aaKnown RBP eCLIP9.2□□□□□ -0.94
ITSN1-225ENST00000472548 FKBP4Q02790 459 aaKnown RBP eCLIP9.2□□□□□ -0.94
ITSN1-225ENST00000472548 CCDC93Q567U6 631 aa9.2□□□□□ -0.94
ITSN1-225ENST00000472548 NPM2Q86SE8 214 aaKnown RBP9.2□□□□□ -0.94
ITSN1-225ENST00000472548 CNTNAP1P78357 1384 aa9.2□□□□□ -0.94
ITSN1-225ENST00000472548 ABCC12Q96J65 1359 aa9.2□□□□□ -0.94
ITSN1-225ENST00000472548 FZD9O00144 591 aa9.19□□□□□ -0.94
ITSN1-225ENST00000472548 SOGA3Q5TF21 947 aa9.19□□□□□ -0.94
ITSN1-225ENST00000472548 TPTE2Q6XPS3 522 aa9.19□□□□□ -0.94
ITSN1-225ENST00000472548 PAXIP1Q6ZW49 1069 aaPredicted RBP9.19□□□□□ -0.94
ITSN1-225ENST00000472548 LDHDQ86WU2 507 aa9.19□□□□□ -0.94
ITSN1-225ENST00000472548 SLAIN1Q8ND83 568 aa9.19□□□□□ -0.94
ITSN1-225ENST00000472548 RTF1Q92541 710 aaKnown RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms