RNA–Protein interactions for RNA: ENST00000472219.5

SNX21-209, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best)

Gene SNX21, Length 1,858 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-209ENST00000472219 RNF20Q5VTR2 975 aa24.97■■□□□ 1.59
SNX21-209ENST00000472219 PRPF40BQ6NWY9 871 aaKnown RBP24.97■■□□□ 1.59
SNX21-209ENST00000472219 JAKMIP1Q96N16 626 aaKnown RBP24.97■■□□□ 1.59
SNX21-209ENST00000472219 CPDO75976 1380 aa24.96■■□□□ 1.59
SNX21-209ENST00000472219 RPAP1Q9BWH6 1393 aaPredicted RBP24.96■■□□□ 1.59
SNX21-209ENST00000472219 KCNJ4P48050 445 aa24.96■■□□□ 1.59
SNX21-209ENST00000472219 NECTIN1Q15223 517 aa24.96■■□□□ 1.59
SNX21-209ENST00000472219 COPRSQ9NQ92 184 aa24.96■■□□□ 1.59
SNX21-209ENST00000472219 ZSCAN22P10073 491 aaPredicted RBP24.96■■□□□ 1.59
SNX21-209ENST00000472219 PTH1RQ03431 593 aa24.96■■□□□ 1.59
SNX21-209ENST00000472219 PARP4Q9UKK3 1724 aaKnown RBP24.95■■□□□ 1.58
SNX21-209ENST00000472219 STX6O43752 255 aa24.95■■□□□ 1.58
SNX21-209ENST00000472219 MAP4K1Q92918 833 aa24.95■■□□□ 1.58
SNX21-209ENST00000472219 FSD1Q9BTV5 496 aa24.95■■□□□ 1.58
SNX21-209ENST00000472219 CCDC8Q9H0W5 538 aaPredicted RBP24.95■■□□□ 1.58
SNX21-209ENST00000472219 RBSNQ9H1K0 784 aa24.95■■□□□ 1.58
SNX21-209ENST00000472219 SYCE3A1L190 88 aa24.94■■□□□ 1.58
SNX21-209ENST00000472219 CSPP1Q1MSJ5 1256 aa24.94■■□□□ 1.58
SNX21-209ENST00000472219 ERBB4Q15303 1308 aa24.94■■□□□ 1.58
SNX21-209ENST00000472219 CABP4P57796 275 aa24.94■■□□□ 1.58
SNX21-209ENST00000472219 SIL1Q9H173 461 aa24.94■■□□□ 1.58
SNX21-209ENST00000472219 RBM8AQ9Y5S9 174 aaKnown RBP24.94■■□□□ 1.58
SNX21-209ENST00000472219 LAMB4A4D0S4 1761 aa24.94■■□□□ 1.58
SNX21-209ENST00000472219 NMIQ13287 307 aaPredicted RBP24.93■■□□□ 1.58
SNX21-209ENST00000472219 KLHL34Q8N239 644 aa24.93■■□□□ 1.58
SNX21-209ENST00000472219 AFDNP55196 1824 aaKnown RBP24.92■■□□□ 1.58
SNX21-209ENST00000472219 CYP27B1O15528 508 aa24.92■■□□□ 1.58
SNX21-209ENST00000472219 CREB3L3Q68CJ9 461 aa24.92■■□□□ 1.58
SNX21-209ENST00000472219 LRP10Q7Z4F1 713 aa24.92■■□□□ 1.58
SNX21-209ENST00000472219 RFX7Q2KHR2 1363 aa24.92■■□□□ 1.58
SNX21-209ENST00000472219 ANKRD1Q15327 319 aa24.92■■□□□ 1.58
SNX21-209ENST00000472219 CHAMP1Q96JM3 812 aa24.92■■□□□ 1.58
SNX21-209ENST00000472219 HMG20BQ9P0W2 317 aa24.92■■□□□ 1.58
SNX21-209ENST00000472219 SYT1P21579 422 aa24.91■■□□□ 1.58
SNX21-209ENST00000472219 RABL6Q3YEC7 729 aaPredicted RBP24.91■■□□□ 1.58
SNX21-209ENST00000472219 USP48Q86UV5 1035 aa24.91■■□□□ 1.58
SNX21-209ENST00000472219 ZSCAN30Q86W11 494 aa24.91■■□□□ 1.58
SNX21-209ENST00000472219 NSFL1CQ9UNZ2 370 aaKnown RBP24.91■■□□□ 1.58
SNX21-209ENST00000472219 USP16Q9Y5T5 823 aa24.91■■□□□ 1.58
SNX21-209ENST00000472219 SPATA31A3Q5VYP0 1347 aa24.9■■□□□ 1.58
SNX21-209ENST00000472219 PLBD2Q8NHP8 589 aa24.9■■□□□ 1.58
SNX21-209ENST00000472219 BOLA2Q9H3K6 86 aa24.9■■□□□ 1.58
SNX21-209ENST00000472219 ANO8Q9HCE9 1232 aaPredicted RBP24.9■■□□□ 1.58
SNX21-209ENST00000472219 ARFGEF2Q9Y6D5 1785 aa24.9■■□□□ 1.58
SNX21-209ENST00000472219 LETM1O95202 739 aaPredicted RBP24.89■■□□□ 1.58
SNX21-209ENST00000472219 F13A1P00488 732 aa24.89■■□□□ 1.58
SNX21-209ENST00000472219 PDLIM2Q96JY6 352 aa24.89■■□□□ 1.58
SNX21-209ENST00000472219 FAM227BQ96M60 508 aa24.89■■□□□ 1.58
SNX21-209ENST00000472219 TSPY26PQ9H489 355 aa24.89■■□□□ 1.58
SNX21-209ENST00000472219 MED23Q9ULK4 1368 aa24.89■■□□□ 1.58
SNX21-209ENST00000472219 ATP5JP18859 108 aa24.89■■□□□ 1.57
SNX21-209ENST00000472219 ADCK5Q3MIX3 580 aa24.89■■□□□ 1.57
SNX21-209ENST00000472219 TLR7Q9NYK1 1049 aaKnown RBP24.89■■□□□ 1.57
SNX21-209ENST00000472219 ALDH8A1Q9H2A2 487 aaPredicted RBP24.88■■□□□ 1.57
SNX21-209ENST00000472219 SLC27A2O14975 620 aa24.87■■□□□ 1.57
SNX21-209ENST00000472219 MSNP26038 577 aaKnown RBP24.87■■□□□ 1.57
SNX21-209ENST00000472219 EPHA10Q5JZY3 1008 aa24.87■■□□□ 1.57
SNX21-209ENST00000472219 JCADQ9P266 1359 aa24.87■■□□□ 1.57
SNX21-209ENST00000472219 GJB2P29033 226 aa24.87■■□□□ 1.57
SNX21-209ENST00000472219 UBE2HP62256 183 aa24.87■■□□□ 1.57
SNX21-209ENST00000472219 CHRNA2Q15822 529 aa24.87■■□□□ 1.57
SNX21-209ENST00000472219 TNNI3KQ59H18 835 aa24.87■■□□□ 1.57
SNX21-209ENST00000472219 UBE3BQ7Z3V4 1068 aa24.87■■□□□ 1.57
SNX21-209ENST00000472219 CCDC83Q8IWF9 413 aa24.87■■□□□ 1.57
SNX21-209ENST00000472219 CABLES1Q8TDN4 633 aa24.87■■□□□ 1.57
SNX21-209ENST00000472219 DDX17Q92841 729 aaKnown RBP24.87■■□□□ 1.57
SNX21-209ENST00000472219 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.87■■□□□ 1.57
SNX21-209ENST00000472219 FPGT-TNNI3KV9GXZ4 949 aa24.87■■□□□ 1.57
SNX21-209ENST00000472219 STRCP1A6NGW2 1772 aa24.87■■□□□ 1.57
SNX21-209ENST00000472219 RFX5P48382 616 aaPredicted RBP24.86■■□□□ 1.57
SNX21-209ENST00000472219 KRT32Q14532 448 aa24.86■■□□□ 1.57
SNX21-209ENST00000472219 BLOC1S2Q6QNY1 142 aa24.86■■□□□ 1.57
SNX21-209ENST00000472219 FAM184AQ8NB25 1140 aa24.86■■□□□ 1.57
SNX21-209ENST00000472219 PCDH11XQ9BZA7 1347 aa24.86■■□□□ 1.57
SNX21-209ENST00000472219 PCDH11YQ9BZA8 1340 aa24.86■■□□□ 1.57
SNX21-209ENST00000472219 A0A087WZG4 1122 aa24.85■■□□□ 1.57
SNX21-209ENST00000472219 A0A0D9SFI3 127 aa24.85■■□□□ 1.57
SNX21-209ENST00000472219 CPA1P15085 419 aa24.85■■□□□ 1.57
SNX21-209ENST00000472219 PDCP20941 246 aa24.85■■□□□ 1.57
SNX21-209ENST00000472219 PTPN12Q05209 780 aaKnown RBP24.85■■□□□ 1.57
SNX21-209ENST00000472219 TSGA10IPQ3SY00 556 aa24.85■■□□□ 1.57
SNX21-209ENST00000472219 KLHDC4Q8TBB5 520 aa24.85■■□□□ 1.57
SNX21-209ENST00000472219 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.85■■□□□ 1.57
SNX21-209ENST00000472219 CCDC183Q5T5S1 534 aa24.85■■□□□ 1.57
SNX21-209ENST00000472219 TICAM2Q86XR7 235 aa24.85■■□□□ 1.57
SNX21-209ENST00000472219 FOXD4L6Q3SYB3 417 aaPredicted RBP24.84■■□□□ 1.57
SNX21-209ENST00000472219 FOXD4L3Q6VB84 417 aaPredicted RBP24.84■■□□□ 1.57
SNX21-209ENST00000472219 LARGE1O95461 756 aa24.83■■□□□ 1.56
SNX21-209ENST00000472219 TFCP2Q12800 502 aa24.83■■□□□ 1.56
SNX21-209ENST00000472219 NAP1L5Q96NT1 182 aaPredicted RBP24.83■■□□□ 1.56
SNX21-209ENST00000472219 LARP6Q9BRS8 491 aaKnown RBP24.83■■□□□ 1.56
SNX21-209ENST00000472219 GDPD2Q9HCC8 539 aa24.83■■□□□ 1.56
SNX21-209ENST00000472219 CNPY2Q9Y2B0 182 aa24.83■■□□□ 1.56
SNX21-209ENST00000472219 ERVV-2B6SEH9 535 aa24.82■■□□□ 1.56
SNX21-209ENST00000472219 GADD45BO75293 160 aaPredicted RBP24.82■■□□□ 1.56
SNX21-209ENST00000472219 ME3Q16798 604 aa24.82■■□□□ 1.56
SNX21-209ENST00000472219 DBNLQ9UJU6 430 aaKnown RBP24.82■■□□□ 1.56
SNX21-209ENST00000472219 TCHHQ07283 1943 aa24.82■■□□□ 1.56
SNX21-209ENST00000472219 GLI3P10071 1580 aa24.82■■□□□ 1.56
SNX21-209ENST00000472219 RPS6KB1P23443 525 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms