RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 C9orf78Q9NZ63 289 aaPredicted RBP24.19■■□□□ 1.46
PSPC1-203ENST00000471658 RTL5Q5HYW3 569 aaPredicted RBP24.18■■□□□ 1.46
PSPC1-203ENST00000471658 SUSD4Q5VX71 490 aa24.18■■□□□ 1.46
PSPC1-203ENST00000471658 GRM8O00222 908 aa24.17■■□□□ 1.46
PSPC1-203ENST00000471658 AFDNP55196 1824 aaKnown RBP24.17■■□□□ 1.46
PSPC1-203ENST00000471658 RGL2O15211 777 aa24.17■■□□□ 1.46
PSPC1-203ENST00000471658 SYNE4Q8N205 404 aa24.17■■□□□ 1.46
PSPC1-203ENST00000471658 ANKRD36CQ5JPF3 1778 aa24.16■■□□□ 1.46
PSPC1-203ENST00000471658 H7C1W4 665 aa24.16■■□□□ 1.46
PSPC1-203ENST00000471658 NFIXQ14938 502 aa24.16■■□□□ 1.46
PSPC1-203ENST00000471658 UBE3BQ7Z3V4 1068 aa24.15■■□□□ 1.46
PSPC1-203ENST00000471658 FAM89AQ96GI7 184 aa24.15■■□□□ 1.46
PSPC1-203ENST00000471658 UTYO14607 1347 aa24.15■■□□□ 1.46
PSPC1-203ENST00000471658 GNAI3P08754 354 aa24.14■■□□□ 1.46
PSPC1-203ENST00000471658 UBTFL1P0CB47 393 aaPredicted RBP24.14■■□□□ 1.46
PSPC1-203ENST00000471658 CASP7P55210 303 aa24.14■■□□□ 1.46
PSPC1-203ENST00000471658 MSL1Q68DK7 614 aa24.14■■□□□ 1.46
PSPC1-203ENST00000471658 SETDB2Q96T68 719 aa24.14■■□□□ 1.46
PSPC1-203ENST00000471658 TM4SF1P30408 202 aa24.13■■□□□ 1.45
PSPC1-203ENST00000471658 R3HDM1Q15032 1099 aaKnown RBP24.13■■□□□ 1.45
PSPC1-203ENST00000471658 PARP10Q53GL7 1025 aa24.13■■□□□ 1.45
PSPC1-203ENST00000471658 TRMT112Q9UI30 125 aaKnown RBP24.13■■□□□ 1.45
PSPC1-203ENST00000471658 SUCLG2Q96I99 432 aa24.13■■□□□ 1.45
PSPC1-203ENST00000471658 PCDHB15Q9Y5E8 787 aa24.13■■□□□ 1.45
PSPC1-203ENST00000471658 LRRFIP2Q9Y608 721 aaKnown RBP24.13■■□□□ 1.45
PSPC1-203ENST00000471658 QSER1Q2KHR3 1735 aa24.13■■□□□ 1.45
PSPC1-203ENST00000471658 NTSR2O95665 410 aa24.12■■□□□ 1.45
PSPC1-203ENST00000471658 PCCAP05165 728 aaPredicted RBP24.12■■□□□ 1.45
PSPC1-203ENST00000471658 ZBTB38Q8NAP3 1195 aaPredicted RBP24.12■■□□□ 1.45
PSPC1-203ENST00000471658 KAZALD1Q96I82 304 aa24.12■■□□□ 1.45
PSPC1-203ENST00000471658 UTP14AQ9BVJ6 771 aaKnown RBP24.12■■□□□ 1.45
PSPC1-203ENST00000471658 CHMP4BQ9H444 224 aaKnown RBP24.12■■□□□ 1.45
PSPC1-203ENST00000471658 IBTKQ9P2D0 1353 aaPredicted RBP24.12■■□□□ 1.45
PSPC1-203ENST00000471658 GNAI2P04899 355 aa24.11■■□□□ 1.45
PSPC1-203ENST00000471658 PPP1R42Q7Z4L9 355 aa24.1■■□□□ 1.45
PSPC1-203ENST00000471658 NUTM1Q86Y26 1132 aa24.1■■□□□ 1.45
PSPC1-203ENST00000471658 NLGN1Q8N2Q7 840 aa24.1■■□□□ 1.45
PSPC1-203ENST00000471658 PSDA5PKW4 1024 aaPredicted RBP24.1■■□□□ 1.45
PSPC1-203ENST00000471658 DDR1Q08345 913 aa24.1■■□□□ 1.45
PSPC1-203ENST00000471658 EPHA10Q5JZY3 1008 aa24.1■■□□□ 1.45
PSPC1-203ENST00000471658 ERICH6BQ5W0A0 696 aa24.1■■□□□ 1.45
PSPC1-203ENST00000471658 CCDC24Q8N4L8 307 aa24.09■■□□□ 1.45
PSPC1-203ENST00000471658 ERFEQ4G0M1 354 aa24.07■■□□□ 1.44
PSPC1-203ENST00000471658 NBPF5PQ86XG9 351 aaPredicted RBP24.07■■□□□ 1.44
PSPC1-203ENST00000471658 POLRMTO00411 1230 aaKnown RBP24.06■■□□□ 1.44
PSPC1-203ENST00000471658 HCLS1P14317 486 aaPredicted RBP24.06■■□□□ 1.44
PSPC1-203ENST00000471658 AAMPQ13685 434 aa24.06■■□□□ 1.44
PSPC1-203ENST00000471658 BICC1Q9H694 974 aaKnown RBP24.06■■□□□ 1.44
PSPC1-203ENST00000471658 SH3TC1Q8TE82 1336 aa24.06■■□□□ 1.44
PSPC1-203ENST00000471658 CARMIL3Q8ND23 1372 aa24.06■■□□□ 1.44
PSPC1-203ENST00000471658 IRS4O14654 1257 aaPredicted RBP24.06■■□□□ 1.44
PSPC1-203ENST00000471658 SERPINB2P05120 415 aa24.06■■□□□ 1.44
PSPC1-203ENST00000471658 MMP10P09238 476 aa24.06■■□□□ 1.44
PSPC1-203ENST00000471658 SIRT2Q8IXJ6 389 aa24.06■■□□□ 1.44
PSPC1-203ENST00000471658 FOXO4P98177 505 aa24.05■■□□□ 1.44
PSPC1-203ENST00000471658 CEP85Q6P2H3 762 aa24.05■■□□□ 1.44
PSPC1-203ENST00000471658 PPP4R2Q9NY27 417 aa24.05■■□□□ 1.44
PSPC1-203ENST00000471658 CDHR2Q9BYE9 1310 aa24.05■■□□□ 1.44
PSPC1-203ENST00000471658 COL24A1Q17RW2 1714 aa24.04■■□□□ 1.44
PSPC1-203ENST00000471658 TPTE2Q6XPS3 522 aa24.04■■□□□ 1.44
PSPC1-203ENST00000471658 ANKRD44Q8N8A2 993 aa24.04■■□□□ 1.44
PSPC1-203ENST00000471658 NYXQ9GZU5 481 aa24.04■■□□□ 1.44
PSPC1-203ENST00000471658 ZBTB7AO95365 584 aa24.03■■□□□ 1.44
PSPC1-203ENST00000471658 GTF2E1P29083 439 aaPredicted RBP24.03■■□□□ 1.44
PSPC1-203ENST00000471658 B4GALNT3Q6L9W6 998 aa24.03■■□□□ 1.44
PSPC1-203ENST00000471658 PRR5LQ6MZQ0 368 aa24.02■■□□□ 1.44
PSPC1-203ENST00000471658 SLC16A10Q8TF71 515 aa24.02■■□□□ 1.44
PSPC1-203ENST00000471658 ABCC12Q96J65 1359 aa24.02■■□□□ 1.44
PSPC1-203ENST00000471658 PNMA6EA0A0J9YXQ4 647 aa24.02■■□□□ 1.44
PSPC1-203ENST00000471658 ATP8B2P98198 1209 aa24.02■■□□□ 1.44
PSPC1-203ENST00000471658 HDAC5Q9UQL6 1122 aa24.02■■□□□ 1.44
PSPC1-203ENST00000471658 IGHDP01880 384 aa24.01■■□□□ 1.43
PSPC1-203ENST00000471658 LMBR1LQ6UX01 489 aa24.01■■□□□ 1.43
PSPC1-203ENST00000471658 CNBD1Q8NA66 436 aa24.01■■□□□ 1.43
PSPC1-203ENST00000471658 CCDC85AQ96PX6 553 aaPredicted RBP24.01■■□□□ 1.43
PSPC1-203ENST00000471658 PLA2G12BQ9BX93 195 aa24.01■■□□□ 1.43
PSPC1-203ENST00000471658 ATF5Q9Y2D1 282 aaPredicted RBP24.01■■□□□ 1.43
PSPC1-203ENST00000471658 PARP3Q9Y6F1 533 aa24.01■■□□□ 1.43
PSPC1-203ENST00000471658 NPHP1O15259 732 aa24■■□□□ 1.43
PSPC1-203ENST00000471658 C3orf67Q6ZVT6 689 aa24■■□□□ 1.43
PSPC1-203ENST00000471658 RPAP2Q8IXW5 612 aaPredicted RBP24■■□□□ 1.43
PSPC1-203ENST00000471658 CASZ1Q86V15 1759 aa24■■□□□ 1.43
PSPC1-203ENST00000471658 PDE8AO60658 829 aa23.99■■□□□ 1.43
PSPC1-203ENST00000471658 SLC10A5Q5PT55 438 aa23.99■■□□□ 1.43
PSPC1-203ENST00000471658 RABL6Q3YEC7 729 aaPredicted RBP23.99■■□□□ 1.43
PSPC1-203ENST00000471658 CCDC136Q96JN2 1154 aa23.99■■□□□ 1.43
PSPC1-203ENST00000471658 SRGAP3O43295 1099 aa23.97■■□□□ 1.43
PSPC1-203ENST00000471658 CSF1RP07333 972 aa23.97■■□□□ 1.43
PSPC1-203ENST00000471658 CTSWP56202 376 aa23.97■■□□□ 1.43
PSPC1-203ENST00000471658 TTLL11Q8NHH1 800 aa23.97■■□□□ 1.43
PSPC1-203ENST00000471658 CHMP3Q9Y3E7 222 aa23.97■■□□□ 1.43
PSPC1-203ENST00000471658 DDX60Q8IY21 1712 aaKnown RBP23.97■■□□□ 1.43
PSPC1-203ENST00000471658 MTX1Q13505 466 aa23.96■■□□□ 1.43
PSPC1-203ENST00000471658 MTFR1LQ9H019 292 aa23.95■■□□□ 1.43
PSPC1-203ENST00000471658 ST5P78524 1137 aa23.95■■□□□ 1.42
PSPC1-203ENST00000471658 HDAC1Q13547 482 aaPredicted RBP23.95■■□□□ 1.42
PSPC1-203ENST00000471658 POLA2Q14181 598 aa23.95■■□□□ 1.42
PSPC1-203ENST00000471658 SSH3Q8TE77 659 aa23.95■■□□□ 1.42
PSPC1-203ENST00000471658 SOCS7O14512 581 aa23.94■■□□□ 1.42
PSPC1-203ENST00000471658 FAM161AQ3B820 660 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms