RNA–Protein interactions for RNA: ENST00000471193.1

FN1-217, Transcript of fibronectin 1, humanhuman

TSL 3

Gene FN1, Length 496 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-217ENST00000471193 USP44Q9H0E7 712 aa14.64□□□□□ -0.07
FN1-217ENST00000471193 CHMP4BQ9H444 224 aaKnown RBP14.64□□□□□ -0.07
FN1-217ENST00000471193 ZBTB40Q9NUA8 1239 aa14.64□□□□□ -0.07
FN1-217ENST00000471193 NIP7Q9Y221 180 aaKnown RBP eCLIP14.64□□□□□ -0.074e-53■□□□□ 10.2
FN1-217ENST00000471193 LAMB2P55268 1798 aa14.63□□□□□ -0.07
FN1-217ENST00000471193 GNAI3P08754 354 aa14.63□□□□□ -0.07
FN1-217ENST00000471193 AAMPQ13685 434 aa14.63□□□□□ -0.07
FN1-217ENST00000471193 ERICH6BQ5W0A0 696 aa14.63□□□□□ -0.07
FN1-217ENST00000471193 CARMIL3Q8ND23 1372 aa14.62□□□□□ -0.07
FN1-217ENST00000471193 MSH5O43196 834 aa14.62□□□□□ -0.07
FN1-217ENST00000471193 NBPF7P0C2Y1 421 aaPredicted RBP14.62□□□□□ -0.07
FN1-217ENST00000471193 H7C1W4 665 aa14.61□□□□□ -0.07
FN1-217ENST00000471193 NTSR2O95665 410 aa14.61□□□□□ -0.07
FN1-217ENST00000471193 PCCAP05165 728 aaPredicted RBP14.61□□□□□ -0.07
FN1-217ENST00000471193 UBTFL1P0CB47 393 aaPredicted RBP14.61□□□□□ -0.07
FN1-217ENST00000471193 CASP7P55210 303 aa14.61□□□□□ -0.07
FN1-217ENST00000471193 NFIXQ14938 502 aa14.61□□□□□ -0.07
FN1-217ENST00000471193 SUSD4Q5VX71 490 aa14.61□□□□□ -0.07
FN1-217ENST00000471193 C9orf78Q9NZ63 289 aaPredicted RBP14.61□□□□□ -0.07
FN1-217ENST00000471193 NRXN2Q9P2S2 1712 aa14.61□□□□□ -0.07
FN1-217ENST00000471193 BICDL1Q6ZP65 573 aa14.6□□□□□ -0.07
FN1-217ENST00000471193 UBE3BQ7Z3V4 1068 aa14.6□□□□□ -0.07
FN1-217ENST00000471193 PPP1R42Q7Z4L9 355 aa14.6□□□□□ -0.07
FN1-217ENST00000471193 ZBTB38Q8NAP3 1195 aaPredicted RBP14.6□□□□□ -0.07
FN1-217ENST00000471193 SETDB2Q96T68 719 aa14.6□□□□□ -0.07
FN1-217ENST00000471193 DDX60Q8IY21 1712 aaKnown RBP14.6□□□□□ -0.07
FN1-217ENST00000471193 CDHR2Q9BYE9 1310 aa14.6□□□□□ -0.07
FN1-217ENST00000471193 GNAI2P04899 355 aa14.59□□□□□ -0.07
FN1-217ENST00000471193 TM4SF1P30408 202 aa14.59□□□□□ -0.07
FN1-217ENST00000471193 NLGN1Q8N2Q7 840 aa14.59□□□□□ -0.07
FN1-217ENST00000471193 UTP14AQ9BVJ6 771 aaKnown RBP14.59□□□□□ -0.07
FN1-217ENST00000471193 PDGFDQ9GZP0 370 aaPredicted RBP14.59□□□□□ -0.07
FN1-217ENST00000471193 C1orf115Q9H7X2 142 aa14.59□□□□□ -0.07
FN1-217ENST00000471193 TRMT112Q9UI30 125 aaKnown RBP14.59□□□□□ -0.07
FN1-217ENST00000471193 DDR1Q08345 913 aa14.58□□□□□ -0.08
FN1-217ENST00000471193 SLC16A10Q8TF71 515 aa14.58□□□□□ -0.08
FN1-217ENST00000471193 SUCLG2Q96I99 432 aa14.58□□□□□ -0.08
FN1-217ENST00000471193 NYXQ9GZU5 481 aa14.58□□□□□ -0.08
FN1-217ENST00000471193 LRRFIP2Q9Y608 721 aaKnown RBP14.58□□□□□ -0.08
FN1-217ENST00000471193 SH3TC1Q8TE82 1336 aa14.58□□□□□ -0.08
FN1-217ENST00000471193 ABCC12Q96J65 1359 aa14.58□□□□□ -0.08
FN1-217ENST00000471193 RIC1Q4ADV7 1423 aa14.58□□□□□ -0.08
FN1-217ENST00000471193 POLRMTO00411 1230 aaKnown RBP14.57□□□□□ -0.08
FN1-217ENST00000471193 R3HDM1Q15032 1099 aaKnown RBP14.57□□□□□ -0.08
FN1-217ENST00000471193 MSL1Q68DK7 614 aa14.57□□□□□ -0.08
FN1-217ENST00000471193 NBPF5PQ86XG9 351 aaPredicted RBP14.57□□□□□ -0.08
FN1-217ENST00000471193 JARID2Q92833 1246 aaPredicted RBP14.57□□□□□ -0.08
FN1-217ENST00000471193 FAM89AQ96GI7 184 aa14.57□□□□□ -0.08
FN1-217ENST00000471193 KAZALD1Q96I82 304 aa14.57□□□□□ -0.08
FN1-217ENST00000471193 HDAC5Q9UQL6 1122 aa14.57□□□□□ -0.08
FN1-217ENST00000471193 GTF3C3Q9Y5Q9 886 aa14.57□□□□□ -0.08
FN1-217ENST00000471193 TNRC6CQ9HCJ0 1690 aaKnown RBP14.57□□□□□ -0.08
FN1-217ENST00000471193 FAM177BA6PVY3 158 aa14.56□□□□□ -0.08
FN1-217ENST00000471193 RTL5Q5HYW3 569 aaPredicted RBP14.56□□□□□ -0.08
FN1-217ENST00000471193 CEP85Q6P2H3 762 aa14.56□□□□□ -0.08
FN1-217ENST00000471193 PLA2G12BQ9BX93 195 aa14.56□□□□□ -0.08
FN1-217ENST00000471193 PCDHB15Q9Y5E8 787 aa14.56□□□□□ -0.08
FN1-217ENST00000471193 IRS4O14654 1257 aaPredicted RBP14.55□□□□□ -0.08
FN1-217ENST00000471193 SERPINB2P05120 415 aa14.55□□□□□ -0.08
FN1-217ENST00000471193 MMP10P09238 476 aa14.55□□□□□ -0.08
FN1-217ENST00000471193 MTX1Q13505 466 aa14.55□□□□□ -0.08
FN1-217ENST00000471193 RABL6Q3YEC7 729 aaPredicted RBP14.55□□□□□ -0.08
FN1-217ENST00000471193 EPHA10Q5JZY3 1008 aa14.55□□□□□ -0.08
FN1-217ENST00000471193 NUTM1Q86Y26 1132 aa14.55□□□□□ -0.08
FN1-217ENST00000471193 SYNE4Q8N205 404 aa14.55□□□□□ -0.08
FN1-217ENST00000471193 ANKRD44Q8N8A2 993 aa14.55□□□□□ -0.08
FN1-217ENST00000471193 CNBD1Q8NA66 436 aa14.55□□□□□ -0.08
FN1-217ENST00000471193 BICC1Q9H694 974 aaKnown RBP14.55□□□□□ -0.08
FN1-217ENST00000471193 FOXO4P98177 505 aa14.54□□□□□ -0.08
FN1-217ENST00000471193 ERFEQ4G0M1 354 aa14.54□□□□□ -0.08
FN1-217ENST00000471193 PRR5LQ6MZQ0 368 aa14.54□□□□□ -0.08
FN1-217ENST00000471193 TPTE2Q6XPS3 522 aa14.54□□□□□ -0.08
FN1-217ENST00000471193 RPAP2Q8IXW5 612 aaPredicted RBP14.54□□□□□ -0.08
FN1-217ENST00000471193 PPP4R2Q9NY27 417 aa14.54□□□□□ -0.08
FN1-217ENST00000471193 MYH3P11055 1940 aa14.54□□□□□ -0.08
FN1-217ENST00000471193 PSDA5PKW4 1024 aaPredicted RBP14.53□□□□□ -0.08
FN1-217ENST00000471193 PDE8AO60658 829 aa14.53□□□□□ -0.08
FN1-217ENST00000471193 HSP90B1P14625 803 aaKnown RBP14.53□□□□□ -0.08
FN1-217ENST00000471193 SIRT2Q8IXJ6 389 aa14.53□□□□□ -0.08
FN1-217ENST00000471193 PARP3Q9Y6F1 533 aa14.53□□□□□ -0.08
FN1-217ENST00000471193 LRP5O75197 1615 aa14.52□□□□□ -0.08
FN1-217ENST00000471193 HCLS1P14317 486 aaPredicted RBP14.52□□□□□ -0.09
FN1-217ENST00000471193 CTSWP56202 376 aa14.52□□□□□ -0.09
FN1-217ENST00000471193 SLC10A5Q5PT55 438 aa14.52□□□□□ -0.09
FN1-217ENST00000471193 MTFR1LQ9H019 292 aa14.52□□□□□ -0.09
FN1-217ENST00000471193 ANKRD31Q8N7Z5 1873 aa14.51□□□□□ -0.09
FN1-217ENST00000471193 PNMA6EA0A0J9YXQ4 647 aa14.51□□□□□ -0.09
FN1-217ENST00000471193 GTF2E1P29083 439 aaPredicted RBP14.51□□□□□ -0.09
FN1-217ENST00000471193 ST5P78524 1137 aa14.51□□□□□ -0.09
FN1-217ENST00000471193 ATP8B2P98198 1209 aa14.51□□□□□ -0.09
FN1-217ENST00000471193 HDAC1Q13547 482 aaPredicted RBP14.51□□□□□ -0.09
FN1-217ENST00000471193 C10orf71Q711Q0 1435 aa14.5□□□□□ -0.09
FN1-217ENST00000471193 RTL9Q8NET4 1388 aa14.5□□□□□ -0.09
FN1-217ENST00000471193 NPHP1O15259 732 aa14.5□□□□□ -0.09
FN1-217ENST00000471193 ZBTB7AO95365 584 aa14.5□□□□□ -0.09
FN1-217ENST00000471193 CSF1RP07333 972 aa14.5□□□□□ -0.09
FN1-217ENST00000471193 POLA2Q14181 598 aa14.5□□□□□ -0.09
FN1-217ENST00000471193 LMBR1LQ6UX01 489 aa14.5□□□□□ -0.09
FN1-217ENST00000471193 TTLL11Q8NHH1 800 aa14.5□□□□□ -0.09
FN1-217ENST00000471193 SSH3Q8TE77 659 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms