RNA–Protein interactions for RNA: ENST00000471046.1

LAMP1-202, Transcript of lysosomal associated membrane protein 1, humanhuman

TSL 3

Gene LAMP1, Length 424 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-202ENST00000471046 NIP7Q9Y221 180 aaKnown RBP eCLIP17.27■□□□□ 0.36
LAMP1-202ENST00000471046 RIC1Q4ADV7 1423 aa17.27■□□□□ 0.35
LAMP1-202ENST00000471046 FAM177BA6PVY3 158 aa17.26■□□□□ 0.35
LAMP1-202ENST00000471046 LMOD1P29536 600 aaPredicted RBP17.26■□□□□ 0.35
LAMP1-202ENST00000471046 ANKRD36CQ5JPF3 1778 aa17.25■□□□□ 0.35
LAMP1-202ENST00000471046 TAF1P21675 1872 aa17.25■□□□□ 0.35
LAMP1-202ENST00000471046 BTBD11A6QL63 1104 aa17.25■□□□□ 0.35
LAMP1-202ENST00000471046 ALDH1B1P30837 517 aa17.25■□□□□ 0.35
LAMP1-202ENST00000471046 EIF6P56537 245 aaKnown RBP17.25■□□□□ 0.35
LAMP1-202ENST00000471046 TPTE2Q6XPS3 522 aa17.25■□□□□ 0.35
LAMP1-202ENST00000471046 JDP2Q8WYK2 163 aa17.25■□□□□ 0.35
LAMP1-202ENST00000471046 NBPF26B4DH59 902 aa17.24■□□□□ 0.35
LAMP1-202ENST00000471046 CRY2Q49AN0 593 aa17.24■□□□□ 0.35
LAMP1-202ENST00000471046 NBPF10Q6P3W6 841 aaKnown RBP17.24■□□□□ 0.35
LAMP1-202ENST00000471046 NBPF15Q8N660 670 aa17.24■□□□□ 0.35
LAMP1-202ENST00000471046 RGL2O15211 777 aa17.23■□□□□ 0.35
LAMP1-202ENST00000471046 MAP2K2P36507 400 aa17.23■□□□□ 0.35
LAMP1-202ENST00000471046 HLFQ16534 295 aa17.23■□□□□ 0.35
LAMP1-202ENST00000471046 USP50Q70EL3 339 aaPredicted RBP17.23■□□□□ 0.35
LAMP1-202ENST00000471046 CFAP44Q96MT7 982 aa17.23■□□□□ 0.35
LAMP1-202ENST00000471046 U2SURPO15042 1029 aaKnown RBP17.21■□□□□ 0.35
LAMP1-202ENST00000471046 SAPCD2Q86UD0 394 aa17.21■□□□□ 0.35
LAMP1-202ENST00000471046 SNRPA1P09661 255 aaKnown RBP17.2■□□□□ 0.34
LAMP1-202ENST00000471046 CC2D2BQ6DHV5 1058 aa17.2■□□□□ 0.34
LAMP1-202ENST00000471046 NUTM1Q86Y26 1132 aa17.2■□□□□ 0.34
LAMP1-202ENST00000471046 LARGE2Q8N3Y3 721 aa17.2■□□□□ 0.34
LAMP1-202ENST00000471046 PHACTR3Q96KR7 559 aa17.2■□□□□ 0.34
LAMP1-202ENST00000471046 CA12O43570 354 aa17.19■□□□□ 0.34
LAMP1-202ENST00000471046 BRPF1P55201 1214 aaPredicted RBP17.19■□□□□ 0.34
LAMP1-202ENST00000471046 DGKZQ13574 1117 aa17.19■□□□□ 0.34
LAMP1-202ENST00000471046 CC2D1BQ5T0F9 858 aaKnown RBP17.19■□□□□ 0.34
LAMP1-202ENST00000471046 KIF7Q2M1P5 1343 aa17.19■□□□□ 0.34
LAMP1-202ENST00000471046 LRRC37AA6NMS7 1700 aa17.18■□□□□ 0.34
LAMP1-202ENST00000471046 IBTKQ9P2D0 1353 aaPredicted RBP17.18■□□□□ 0.34
LAMP1-202ENST00000471046 PER1O15534 1290 aaPredicted RBP17.18■□□□□ 0.34
LAMP1-202ENST00000471046 CELF2O95319 508 aaKnown RBP17.18■□□□□ 0.34
LAMP1-202ENST00000471046 HOXA10P31260 410 aaPredicted RBP17.18■□□□□ 0.34
LAMP1-202ENST00000471046 GLIS2Q9BZE0 524 aaPredicted RBP17.18■□□□□ 0.34
LAMP1-202ENST00000471046 ADARB2Q9NS39 739 aaKnown RBP17.18■□□□□ 0.34
LAMP1-202ENST00000471046 GPRC5DQ9NZD1 345 aa17.18■□□□□ 0.34
LAMP1-202ENST00000471046 GTF2E1P29083 439 aaPredicted RBP17.17■□□□□ 0.34
LAMP1-202ENST00000471046 DDX60Q8IY21 1712 aaKnown RBP17.17■□□□□ 0.34
LAMP1-202ENST00000471046 NIM1KQ8IY84 436 aa17.17■□□□□ 0.34
LAMP1-202ENST00000471046 HHIPL1Q96JK4 782 aa17.17■□□□□ 0.34
LAMP1-202ENST00000471046 RSPH6AQ9H0K4 717 aa17.17■□□□□ 0.34
LAMP1-202ENST00000471046 UBN2Q6ZU65 1347 aa17.17■□□□□ 0.34
LAMP1-202ENST00000471046 NPC1L1Q9UHC9 1359 aa17.16■□□□□ 0.34
LAMP1-202ENST00000471046 DUOX1Q9NRD9 1551 aa17.16■□□□□ 0.34
LAMP1-202ENST00000471046 PPEF1O14829 653 aaPredicted RBP17.16■□□□□ 0.34
LAMP1-202ENST00000471046 PRKAR2BP31323 418 aa17.16■□□□□ 0.34
LAMP1-202ENST00000471046 CIAPIN1Q6FI81 312 aa17.16■□□□□ 0.34
LAMP1-202ENST00000471046 RPGRQ92834 1020 aaKnown RBP17.16■□□□□ 0.34
LAMP1-202ENST00000471046 ZIC5Q96T25 663 aa17.16■□□□□ 0.34
LAMP1-202ENST00000471046 NYXQ9GZU5 481 aa17.16■□□□□ 0.34
LAMP1-202ENST00000471046 CLSPNQ9HAW4 1339 aa17.16■□□□□ 0.34
LAMP1-202ENST00000471046 PPIP5K2O43314 1243 aa17.15■□□□□ 0.34
LAMP1-202ENST00000471046 AOC3Q16853 763 aa17.15■□□□□ 0.34
LAMP1-202ENST00000471046 MCM10Q7L590 875 aa17.15■□□□□ 0.34
LAMP1-202ENST00000471046 TCERG1O14776 1098 aaKnown RBP17.14■□□□□ 0.33
LAMP1-202ENST00000471046 GRIPAP1Q4V328 841 aa17.14■□□□□ 0.33
LAMP1-202ENST00000471046 C3orf67Q6ZVT6 689 aa17.14■□□□□ 0.33
LAMP1-202ENST00000471046 GMPSP49915 693 aaPredicted RBP17.13■□□□□ 0.33
LAMP1-202ENST00000471046 CXCL9Q07325 125 aa17.13■□□□□ 0.33
LAMP1-202ENST00000471046 CRAMP1Q96RY5 1269 aa17.13■□□□□ 0.33
LAMP1-202ENST00000471046 ZNF408Q9H9D4 720 aa17.13■□□□□ 0.33
LAMP1-202ENST00000471046 PGAP2Q9UHJ9 254 aa17.13■□□□□ 0.33
LAMP1-202ENST00000471046 MAP3K15Q6ZN16 1313 aa17.13■□□□□ 0.33
LAMP1-202ENST00000471046 HIRAP54198 1017 aaPredicted RBP17.12■□□□□ 0.33
LAMP1-202ENST00000471046 DCTN1Q14203 1278 aa17.12■□□□□ 0.33
LAMP1-202ENST00000471046 TRPM4Q8TD43 1214 aa17.12■□□□□ 0.33
LAMP1-202ENST00000471046 PSME4Q14997 1843 aa17.12■□□□□ 0.33
LAMP1-202ENST00000471046 ERVV-1B6SEH8 477 aa17.11■□□□□ 0.33
LAMP1-202ENST00000471046 NTSR2O95665 410 aa17.11■□□□□ 0.33
LAMP1-202ENST00000471046 GPTP24298 496 aa17.11■□□□□ 0.33
LAMP1-202ENST00000471046 SOX10P56693 466 aa17.11■□□□□ 0.33
LAMP1-202ENST00000471046 TTLL7Q6ZT98 887 aa17.11■□□□□ 0.33
LAMP1-202ENST00000471046 NGEFQ8N5V2 710 aa17.11■□□□□ 0.33
LAMP1-202ENST00000471046 RBM17Q96I25 401 aaKnown RBP17.11■□□□□ 0.33
LAMP1-202ENST00000471046 CDHR2Q9BYE9 1310 aa17.11■□□□□ 0.33
LAMP1-202ENST00000471046 SCN9AQ15858 1988 aa17.11■□□□□ 0.33
LAMP1-202ENST00000471046 NOGQ13253 232 aa17.1■□□□□ 0.33
LAMP1-202ENST00000471046 SUSD4Q5VX71 490 aa17.1■□□□□ 0.33
LAMP1-202ENST00000471046 ZNRF3Q9ULT6 936 aa17.1■□□□□ 0.33
LAMP1-202ENST00000471046 SHTN1A0MZ66 631 aa17.09■□□□□ 0.33
LAMP1-202ENST00000471046 ABCC4O15439 1325 aa17.08■□□□□ 0.32
LAMP1-202ENST00000471046 CNGB1Q14028 1251 aaPredicted RBP17.08■□□□□ 0.32
LAMP1-202ENST00000471046 DLK2Q6UY11 383 aa17.08■□□□□ 0.32
LAMP1-202ENST00000471046 RTF1Q92541 710 aaKnown RBP17.08■□□□□ 0.32
LAMP1-202ENST00000471046 RTFDC1Q9BY42 306 aaPredicted RBP17.08■□□□□ 0.32
LAMP1-202ENST00000471046 VPS33BQ9H267 617 aa17.08■□□□□ 0.32
LAMP1-202ENST00000471046 ZBTB3Q9H5J0 574 aa17.08■□□□□ 0.32
LAMP1-202ENST00000471046 ATP6V0A2Q9Y487 856 aa17.08■□□□□ 0.32
LAMP1-202ENST00000471046 FAM155AB1AL88 458 aaPredicted RBP17.07■□□□□ 0.32
LAMP1-202ENST00000471046 HUNKP57058 714 aa17.07■□□□□ 0.32
LAMP1-202ENST00000471046 KIF6Q6ZMV9 814 aa17.07■□□□□ 0.32
LAMP1-202ENST00000471046 ZNF34Q8IZ26 560 aa17.07■□□□□ 0.32
LAMP1-202ENST00000471046 ZC3H15Q8WU90 426 aaKnown RBP17.07■□□□□ 0.32
LAMP1-202ENST00000471046 MIS18AQ9NYP9 233 aa17.07■□□□□ 0.32
LAMP1-202ENST00000471046 COL4A1P02462 1669 aa17.07■□□□□ 0.32
LAMP1-202ENST00000471046 RAD17O75943 681 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms