RNA–Protein interactions for RNA: ENST00000470776.1

LMCD1-207, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 579 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-207ENST00000470776 MYH14Q7Z406 1995 aaKnown RBP11.08□□□□□ -0.64
LMCD1-207ENST00000470776 FOXO4P98177 505 aa11.08□□□□□ -0.64
LMCD1-207ENST00000470776 PARP10Q53GL7 1025 aa11.08□□□□□ -0.64
LMCD1-207ENST00000470776 EPHA10Q5JZY3 1008 aa11.08□□□□□ -0.64
LMCD1-207ENST00000470776 CHD1LQ86WJ1 897 aa11.08□□□□□ -0.64
LMCD1-207ENST00000470776 CCDC125Q86Z20 511 aa11.08□□□□□ -0.64
LMCD1-207ENST00000470776 ZBTB38Q8NAP3 1195 aaPredicted RBP11.08□□□□□ -0.64
LMCD1-207ENST00000470776 BCL2L12Q9HB09 334 aa11.08□□□□□ -0.64
LMCD1-207ENST00000470776 GNPATO15228 680 aa11.07□□□□□ -0.64
LMCD1-207ENST00000470776 SRGAP3O43295 1099 aa11.07□□□□□ -0.64
LMCD1-207ENST00000470776 APBA3O96018 575 aa11.07□□□□□ -0.64
LMCD1-207ENST00000470776 UBE3BQ7Z3V4 1068 aa11.07□□□□□ -0.64
LMCD1-207ENST00000470776 ARHGEF1Q92888 912 aaKnown RBP11.07□□□□□ -0.64
LMCD1-207ENST00000470776 BICC1Q9H694 974 aaKnown RBP11.07□□□□□ -0.64
LMCD1-207ENST00000470776 ZNF652Q9Y2D9 606 aa11.07□□□□□ -0.64
LMCD1-207ENST00000470776 KAT6BQ8WYB5 2073 aa11.07□□□□□ -0.64
LMCD1-207ENST00000470776 UBN2Q6ZU65 1347 aa11.07□□□□□ -0.64
LMCD1-207ENST00000470776 C4BP0C0L5 1744 aa11.06□□□□□ -0.64
LMCD1-207ENST00000470776 RAB11FIP3O75154 756 aa11.06□□□□□ -0.64
LMCD1-207ENST00000470776 CSF1RP07333 972 aa11.06□□□□□ -0.64
LMCD1-207ENST00000470776 PDE4AP27815 886 aa11.06□□□□□ -0.64
LMCD1-207ENST00000470776 SSFA2P28290 1259 aa11.06□□□□□ -0.64
LMCD1-207ENST00000470776 ANP32AP39687 249 aaKnown RBP11.06□□□□□ -0.64
LMCD1-207ENST00000470776 RFX5P48382 616 aaPredicted RBP11.06□□□□□ -0.64
LMCD1-207ENST00000470776 HSP90AB4PQ58FF6 505 aa11.06□□□□□ -0.64
LMCD1-207ENST00000470776 TRAPPC3LQ5T215 181 aa11.06□□□□□ -0.64
LMCD1-207ENST00000470776 AMIGO3Q86WK7 504 aa11.06□□□□□ -0.64
LMCD1-207ENST00000470776 AK7Q96M32 723 aa11.06□□□□□ -0.64
LMCD1-207ENST00000470776 ARXQ96QS3 562 aa11.06□□□□□ -0.64
LMCD1-207ENST00000470776 TAF1LQ8IZX4 1826 aa11.05□□□□□ -0.64
LMCD1-207ENST00000470776 SF3B2Q13435 895 aaKnown RBP11.05□□□□□ -0.64
LMCD1-207ENST00000470776 ANKRD45Q5TZF3 282 aa11.05□□□□□ -0.64
LMCD1-207ENST00000470776 SUSD4Q5VX71 490 aa11.05□□□□□ -0.64
LMCD1-207ENST00000470776 SKAP1Q86WV1 359 aa11.05□□□□□ -0.64
LMCD1-207ENST00000470776 AKT1S1Q96B36 256 aa11.05□□□□□ -0.64
LMCD1-207ENST00000470776 COPRSQ9NQ92 184 aa11.05□□□□□ -0.64
LMCD1-207ENST00000470776 USP42Q9H9J4 1324 aaKnown RBP11.05□□□□□ -0.64
LMCD1-207ENST00000470776 EP400Q96L91 3159 aa11.04□□□□□ -0.64
LMCD1-207ENST00000470776 GPTP24298 496 aa11.04□□□□□ -0.64
LMCD1-207ENST00000470776 EN1Q05925 392 aaPredicted RBP11.04□□□□□ -0.64
LMCD1-207ENST00000470776 JARID2Q92833 1246 aaPredicted RBP11.04□□□□□ -0.64
LMCD1-207ENST00000470776 CAMKK2Q96RR4 588 aa11.04□□□□□ -0.64
LMCD1-207ENST00000470776 UTP14AQ9BVJ6 771 aaKnown RBP11.04□□□□□ -0.64
LMCD1-207ENST00000470776 ZPR1O75312 459 aa11.03□□□□□ -0.64
LMCD1-207ENST00000470776 SURF6O75683 361 aaKnown RBP11.03□□□□□ -0.64
LMCD1-207ENST00000470776 NTSR2O95665 410 aa11.03□□□□□ -0.64
LMCD1-207ENST00000470776 PTPN12Q05209 780 aaKnown RBP11.03□□□□□ -0.64
LMCD1-207ENST00000470776 SLC10A5Q5PT55 438 aa11.03□□□□□ -0.64
LMCD1-207ENST00000470776 USPL1Q5W0Q7 1092 aa11.03□□□□□ -0.64
LMCD1-207ENST00000470776 LMBR1LQ6UX01 489 aa11.03□□□□□ -0.64
LMCD1-207ENST00000470776 KIF1BPQ96EK5 621 aa11.03□□□□□ -0.64
LMCD1-207ENST00000470776 FAM89AQ96GI7 184 aa11.03□□□□□ -0.64
LMCD1-207ENST00000470776 LNPKQ9C0E8 428 aa11.03□□□□□ -0.64
LMCD1-207ENST00000470776 TRMT112Q9UI30 125 aaKnown RBP11.03□□□□□ -0.64
LMCD1-207ENST00000470776 NIP7Q9Y221 180 aaKnown RBP eCLIP11.03□□□□□ -0.64
LMCD1-207ENST00000470776 TNS1Q9HBL0 1735 aaKnown RBP11.03□□□□□ -0.64
LMCD1-207ENST00000470776 SH3TC1Q8TE82 1336 aa11.03□□□□□ -0.64
LMCD1-207ENST00000470776 RGPD3A6NKT7 1758 aaPredicted RBP11.03□□□□□ -0.64
LMCD1-207ENST00000470776 BCORQ6W2J9 1755 aa11.03□□□□□ -0.64
LMCD1-207ENST00000470776 RGPD4Q7Z3J3 1758 aa11.03□□□□□ -0.64
LMCD1-207ENST00000470776 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.02□□□□□ -0.65
LMCD1-207ENST00000470776 IRS4O14654 1257 aaPredicted RBP11.02□□□□□ -0.65
LMCD1-207ENST00000470776 PDE8AO60658 829 aa11.02□□□□□ -0.65
LMCD1-207ENST00000470776 HSP90B1P14625 803 aaKnown RBP11.02□□□□□ -0.65
LMCD1-207ENST00000470776 RFC4P35249 363 aa11.02□□□□□ -0.65
LMCD1-207ENST00000470776 EZH2Q15910 746 aaKnown RBP11.02□□□□□ -0.65
LMCD1-207ENST00000470776 TBC1D9BQ66K14 1250 aa11.02□□□□□ -0.65
LMCD1-207ENST00000470776 SMIM5Q71RC9 77 aa11.02□□□□□ -0.65
LMCD1-207ENST00000470776 ERC1Q8IUD2 1116 aa11.02□□□□□ -0.65
LMCD1-207ENST00000470776 TTLL11Q8NHH1 800 aa11.02□□□□□ -0.65
LMCD1-207ENST00000470776 RHPN1Q8TCX5 695 aa11.02□□□□□ -0.65
LMCD1-207ENST00000470776 LRRCC1Q9C099 1032 aa11.02□□□□□ -0.65
LMCD1-207ENST00000470776 SRP68Q9UHB9 627 aaKnown RBP11.02□□□□□ -0.65
LMCD1-207ENST00000470776 FBXO3Q9UK99 471 aa11.02□□□□□ -0.65
LMCD1-207ENST00000470776 EXOC6BQ9Y2D4 811 aa11.02□□□□□ -0.65
LMCD1-207ENST00000470776 ANKRD36CQ5JPF3 1778 aa11.02□□□□□ -0.65
LMCD1-207ENST00000470776 SALL3Q9BXA9 1300 aa11.02□□□□□ -0.65
LMCD1-207ENST00000470776 NUP98P52948 1817 aa11.02□□□□□ -0.65
LMCD1-207ENST00000470776 SCN7AQ01118 1682 aa11.01□□□□□ -0.65
LMCD1-207ENST00000470776 AFDNP55196 1824 aaKnown RBP11.01□□□□□ -0.65
LMCD1-207ENST00000470776 RGS3P49796 1198 aa11.01□□□□□ -0.65
LMCD1-207ENST00000470776 ZNF827Q17R98 1081 aa11.01□□□□□ -0.65
LMCD1-207ENST00000470776 SYNE4Q8N205 404 aa11.01□□□□□ -0.65
LMCD1-207ENST00000470776 FLAD1Q8NFF5 587 aa11.01□□□□□ -0.65
LMCD1-207ENST00000470776 OSBPL3Q9H4L5 887 aa11.01□□□□□ -0.65
LMCD1-207ENST00000470776 SMARCA5O60264 1052 aaPredicted RBP11□□□□□ -0.65
LMCD1-207ENST00000470776 SASH1O94885 1247 aa11□□□□□ -0.65
LMCD1-207ENST00000470776 TM4SF1P30408 202 aa11□□□□□ -0.65
LMCD1-207ENST00000470776 BAG6P46379 1132 aa11□□□□□ -0.65
LMCD1-207ENST00000470776 CTSWP56202 376 aa11□□□□□ -0.65
LMCD1-207ENST00000470776 G3BP1Q13283 466 aaKnown RBP eCLIP11□□□□□ -0.65
LMCD1-207ENST00000470776 PLEKHM2Q8IWE5 1019 aa11□□□□□ -0.65
LMCD1-207ENST00000470776 SETDB2Q96T68 719 aa11□□□□□ -0.65
LMCD1-207ENST00000470776 NYXQ9GZU5 481 aa11□□□□□ -0.65
LMCD1-207ENST00000470776 ZBTB47Q9UFB7 747 aaPredicted RBP11□□□□□ -0.65
LMCD1-207ENST00000470776 STAP2Q9UGK3 403 aa11□□□□□ -0.65
LMCD1-207ENST00000470776 PA2G4Q9UQ80 394 aaKnown RBP11□□□□□ -0.65
LMCD1-207ENST00000470776 RTL9Q8NET4 1388 aa11□□□□□ -0.65
LMCD1-207ENST00000470776 CIAO1O76071 339 aa10.99□□□□□ -0.65
LMCD1-207ENST00000470776 GYS1P13807 737 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms