RNA–Protein interactions for RNA: ENST00000470743.4

SDHC-206, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 5

Gene SDHC, Length 832 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-206ENST00000470743 GNAT3A8MTJ3 354 aa12.48□□□□□ -0.41
SDHC-206ENST00000470743 PRPF38BQ5VTL8 546 aaKnown RBP12.48□□□□□ -0.41
SDHC-206ENST00000470743 CC2D2BQ6DHV5 1058 aa12.48□□□□□ -0.41
SDHC-206ENST00000470743 NIM1KQ8IY84 436 aa12.48□□□□□ -0.41
SDHC-206ENST00000470743 IL17REQ8NFR9 667 aa12.48□□□□□ -0.41
SDHC-206ENST00000470743 HHIPL1Q96JK4 782 aa12.48□□□□□ -0.41
SDHC-206ENST00000470743 ZNF408Q9H9D4 720 aa12.48□□□□□ -0.41
SDHC-206ENST00000470743 ADARB2Q9NS39 739 aaKnown RBP12.48□□□□□ -0.41
SDHC-206ENST00000470743 ABCC12Q96J65 1359 aa12.47□□□□□ -0.41
SDHC-206ENST00000470743 AKAP11Q9UKA4 1901 aa12.47□□□□□ -0.41
SDHC-206ENST00000470743 NUP98P52948 1817 aa12.47□□□□□ -0.41
SDHC-206ENST00000470743 DIAPH1O60610 1272 aaKnown RBP12.47□□□□□ -0.41
SDHC-206ENST00000470743 GAS2L2Q8NHY3 880 aa12.47□□□□□ -0.41
SDHC-206ENST00000470743 GLIS2Q9BZE0 524 aaPredicted RBP12.47□□□□□ -0.41
SDHC-206ENST00000470743 BTBD11A6QL63 1104 aa12.46□□□□□ -0.41
SDHC-206ENST00000470743 NOGQ13253 232 aa12.46□□□□□ -0.41
SDHC-206ENST00000470743 RPGRQ92834 1020 aaKnown RBP12.46□□□□□ -0.41
SDHC-206ENST00000470743 GPRC5DQ9NZD1 345 aa12.46□□□□□ -0.41
SDHC-206ENST00000470743 USP16Q9Y5T5 823 aa12.46□□□□□ -0.41
SDHC-206ENST00000470743 CEMIPQ8WUJ3 1361 aa12.45□□□□□ -0.42
SDHC-206ENST00000470743 RGL2O15211 777 aa12.45□□□□□ -0.42
SDHC-206ENST00000470743 PPIP5K2O43314 1243 aa12.45□□□□□ -0.42
SDHC-206ENST00000470743 KCNQ3O43525 872 aa12.45□□□□□ -0.42
SDHC-206ENST00000470743 CRY2Q49AN0 593 aa12.45□□□□□ -0.42
SDHC-206ENST00000470743 GRIPAP1Q4V328 841 aa12.45□□□□□ -0.42
SDHC-206ENST00000470743 RIC1Q4ADV7 1423 aa12.45□□□□□ -0.42
SDHC-206ENST00000470743 PRAMEF22A3QJZ6 481 aa12.44□□□□□ -0.42
SDHC-206ENST00000470743 NYXQ9GZU5 481 aa12.44□□□□□ -0.42
SDHC-206ENST00000470743 NPC1L1Q9UHC9 1359 aa12.43□□□□□ -0.42
SDHC-206ENST00000470743 COL3A1P02461 1466 aaPredicted RBP12.43□□□□□ -0.42
SDHC-206ENST00000470743 TCERG1O14776 1098 aaKnown RBP12.43□□□□□ -0.42
SDHC-206ENST00000470743 PPEF1O14829 653 aaPredicted RBP12.43□□□□□ -0.42
SDHC-206ENST00000470743 U2SURPO15042 1029 aaKnown RBP12.43□□□□□ -0.42
SDHC-206ENST00000470743 SNRPA1P09661 255 aaKnown RBP12.43□□□□□ -0.42
SDHC-206ENST00000470743 HUNKP57058 714 aa12.43□□□□□ -0.42
SDHC-206ENST00000470743 AOC3Q16853 763 aa12.43□□□□□ -0.42
SDHC-206ENST00000470743 NUTM1Q86Y26 1132 aa12.43□□□□□ -0.42
SDHC-206ENST00000470743 ZIC5Q96T25 663 aa12.43□□□□□ -0.42
SDHC-206ENST00000470743 CDHR2Q9BYE9 1310 aa12.42□□□□□ -0.42
SDHC-206ENST00000470743 GMPSP49915 693 aaPredicted RBP12.42□□□□□ -0.42
SDHC-206ENST00000470743 EIF4G2P78344 907 aaKnown RBP eCLIP12.42□□□□□ -0.42
SDHC-206ENST00000470743 HLFQ16534 295 aa12.42□□□□□ -0.42
SDHC-206ENST00000470743 AMER1Q5JTC6 1135 aaPredicted RBP12.42□□□□□ -0.42
SDHC-206ENST00000470743 SLC51AQ86UW1 340 aa12.42□□□□□ -0.42
SDHC-206ENST00000470743 TMX4Q9H1E5 349 aaPredicted RBP12.42□□□□□ -0.42
SDHC-206ENST00000470743 SAGE1Q9NXZ1 904 aa12.42□□□□□ -0.42
SDHC-206ENST00000470743 KIF7Q2M1P5 1343 aa12.41□□□□□ -0.42
SDHC-206ENST00000470743 NBPF26B4DH59 902 aa12.41□□□□□ -0.42
SDHC-206ENST00000470743 HSPA5P11021 654 aaKnown RBP12.41□□□□□ -0.42
SDHC-206ENST00000470743 NBPF10Q6P3W6 841 aaKnown RBP12.41□□□□□ -0.42
SDHC-206ENST00000470743 CDC37L1Q7L3B6 337 aa12.41□□□□□ -0.42
SDHC-206ENST00000470743 NBPF15Q8N660 670 aa12.41□□□□□ -0.42
SDHC-206ENST00000470743 RBM17Q96I25 401 aaKnown RBP12.41□□□□□ -0.42
SDHC-206ENST00000470743 BCL2L13Q9BXK5 485 aa12.41□□□□□ -0.42
SDHC-206ENST00000470743 HOXA10P31260 410 aaPredicted RBP12.4□□□□□ -0.42
SDHC-206ENST00000470743 CXCL9Q07325 125 aa12.4□□□□□ -0.42
SDHC-206ENST00000470743 TRPM4Q8TD43 1214 aa12.4□□□□□ -0.42
SDHC-206ENST00000470743 ZC3H15Q8WU90 426 aaKnown RBP12.4□□□□□ -0.42
SDHC-206ENST00000470743 CRAMP1Q96RY5 1269 aa12.4□□□□□ -0.42
SDHC-206ENST00000470743 PGAP2Q9UHJ9 254 aa12.4□□□□□ -0.42
SDHC-206ENST00000470743 ZNRF3Q9ULT6 936 aa12.4□□□□□ -0.42
SDHC-206ENST00000470743 IBTKQ9P2D0 1353 aaPredicted RBP12.4□□□□□ -0.42
SDHC-206ENST00000470743 LAMB2P55268 1798 aa12.39□□□□□ -0.43
SDHC-206ENST00000470743 SUPT20HQ8NEM7 779 aa12.39□□□□□ -0.43
SDHC-206ENST00000470743 VPS33BQ9H267 617 aa12.39□□□□□ -0.43
SDHC-206ENST00000470743 POLR2AP24928 1970 aaKnown RBP12.39□□□□□ -0.43
SDHC-206ENST00000470743 TRPA1O75762 1119 aa12.38□□□□□ -0.43
SDHC-206ENST00000470743 GPTP24298 496 aa12.38□□□□□ -0.43
SDHC-206ENST00000470743 RGMBQ6NW40 437 aa12.38□□□□□ -0.43
SDHC-206ENST00000470743 CTU1Q7Z7A3 348 aaKnown RBP12.38□□□□□ -0.43
SDHC-206ENST00000470743 USP48Q86UV5 1035 aa12.38□□□□□ -0.43
SDHC-206ENST00000470743 FAM155AB1AL88 458 aaPredicted RBP12.37□□□□□ -0.43
SDHC-206ENST00000470743 RAD17O75943 681 aa12.37□□□□□ -0.43
SDHC-206ENST00000470743 HIRAP54198 1017 aaPredicted RBP12.37□□□□□ -0.43
SDHC-206ENST00000470743 KIF23Q02241 960 aaPredicted RBP12.37□□□□□ -0.43
SDHC-206ENST00000470743 TNIP1Q15025 636 aa12.37□□□□□ -0.43
SDHC-206ENST00000470743 CC2D1BQ5T0F9 858 aaKnown RBP12.37□□□□□ -0.43
SDHC-206ENST00000470743 KIF6Q6ZMV9 814 aa12.37□□□□□ -0.43
SDHC-206ENST00000470743 NGEFQ8N5V2 710 aa12.37□□□□□ -0.43
SDHC-206ENST00000470743 RTF1Q92541 710 aaKnown RBP12.37□□□□□ -0.43
SDHC-206ENST00000470743 RNF186Q9NXI6 227 aa12.37□□□□□ -0.43
SDHC-206ENST00000470743 TIMELESSQ9UNS1 1208 aa12.37□□□□□ -0.43
SDHC-206ENST00000470743 DDX60Q8IY21 1712 aaKnown RBP12.37□□□□□ -0.43
SDHC-206ENST00000470743 MAP3K15Q6ZN16 1313 aa12.37□□□□□ -0.43
SDHC-206ENST00000470743 UBN2Q6ZU65 1347 aa12.37□□□□□ -0.43
SDHC-206ENST00000470743 KDM3BQ7LBC6 1761 aa12.36□□□□□ -0.43
SDHC-206ENST00000470743 H7C1D1 291 aa12.36□□□□□ -0.43
SDHC-206ENST00000470743 PRKAR2BP31323 418 aa12.36□□□□□ -0.43
SDHC-206ENST00000470743 ZNF157P51786 506 aaPredicted RBP12.36□□□□□ -0.43
SDHC-206ENST00000470743 DPP8Q6V1X1 898 aaPredicted RBP12.36□□□□□ -0.43
SDHC-206ENST00000470743 C2orf69Q8N8R5 385 aa12.36□□□□□ -0.43
SDHC-206ENST00000470743 CCDC102AQ96A19 550 aa12.36□□□□□ -0.43
SDHC-206ENST00000470743 GCC1Q96CN9 775 aa12.36□□□□□ -0.43
SDHC-206ENST00000470743 GBA2Q9HCG7 927 aaPredicted RBP12.36□□□□□ -0.43
SDHC-206ENST00000470743 CNOT7Q9UIV1 285 aaKnown RBP12.36□□□□□ -0.43
SDHC-206ENST00000470743 ATP6V0A2Q9Y487 856 aa12.36□□□□□ -0.43
SDHC-206ENST00000470743 ANKRD36CQ5JPF3 1778 aa12.35□□□□□ -0.43
SDHC-206ENST00000470743 SHTN1A0MZ66 631 aa12.35□□□□□ -0.43
SDHC-206ENST00000470743 ERVV-1B6SEH8 477 aa12.35□□□□□ -0.43
SDHC-206ENST00000470743 DLK2Q6UY11 383 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms