RNA–Protein interactions for RNA: ENST00000470463.1

SND1-208, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-208ENST00000470463 FBXO3Q9UK99 471 aa13.5□□□□□ -0.25
SND1-208ENST00000470463 KAT6BQ8WYB5 2073 aa13.5□□□□□ -0.25
SND1-208ENST00000470463 TJP1Q07157 1748 aa13.5□□□□□ -0.25
SND1-208ENST00000470463 TTC41PQ6P2S7 1318 aa13.49□□□□□ -0.25
SND1-208ENST00000470463 SALL3Q9BXA9 1300 aa13.49□□□□□ -0.25
SND1-208ENST00000470463 ATP5J2-PTCD1G3V325 749 aa13.49□□□□□ -0.25
SND1-208ENST00000470463 ERC2O15083 957 aa13.49□□□□□ -0.25
SND1-208ENST00000470463 APBA3O96018 575 aa13.49□□□□□ -0.25
SND1-208ENST00000470463 PCCAP05165 728 aaPredicted RBP13.49□□□□□ -0.25
SND1-208ENST00000470463 EZH2Q15910 746 aaKnown RBP13.49□□□□□ -0.25
SND1-208ENST00000470463 AK7Q96M32 723 aa13.49□□□□□ -0.25
SND1-208ENST00000470463 SLC4A9Q96Q91 983 aa13.49□□□□□ -0.25
SND1-208ENST00000470463 PLA2G12BQ9BX93 195 aa13.49□□□□□ -0.25
SND1-208ENST00000470463 COPRSQ9NQ92 184 aa13.49□□□□□ -0.25
SND1-208ENST00000470463 CDHR2Q9BYE9 1310 aa13.48□□□□□ -0.25
SND1-208ENST00000470463 USP42Q9H9J4 1324 aaKnown RBP13.48□□□□□ -0.25
SND1-208ENST00000470463 SMARCA5O60264 1052 aaPredicted RBP13.48□□□□□ -0.25
SND1-208ENST00000470463 CRKLP46109 303 aaKnown RBP13.48□□□□□ -0.25
SND1-208ENST00000470463 EIF5P55010 431 aaKnown RBP13.48□□□□□ -0.25
SND1-208ENST00000470463 CASP7P55210 303 aa13.48□□□□□ -0.25
SND1-208ENST00000470463 FAM182BQ5T319 152 aa13.48□□□□□ -0.25
SND1-208ENST00000470463 DZIP3Q86Y13 1208 aaKnown RBP13.48□□□□□ -0.25
SND1-208ENST00000470463 ZBTB38Q8NAP3 1195 aaPredicted RBP13.48□□□□□ -0.25
SND1-208ENST00000470463 KAZALD1Q96I82 304 aa13.48□□□□□ -0.25
SND1-208ENST00000470463 CAMKK2Q96RR4 588 aa13.48□□□□□ -0.25
SND1-208ENST00000470463 DAXXQ9UER7 740 aaPredicted RBP13.48□□□□□ -0.25
SND1-208ENST00000470463 ZNF652Q9Y2D9 606 aa13.48□□□□□ -0.25
SND1-208ENST00000470463 ZBTB1Q9Y2K1 713 aa13.48□□□□□ -0.25
SND1-208ENST00000470463 ZNF330Q9Y3S2 320 aaPredicted RBP13.48□□□□□ -0.25
SND1-208ENST00000470463 LRP5O75197 1615 aa13.48□□□□□ -0.25
SND1-208ENST00000470463 RREB1Q92766 1687 aa13.47□□□□□ -0.25
SND1-208ENST00000470463 TRIM37O94972 964 aa13.47□□□□□ -0.25
SND1-208ENST00000470463 PARP10Q53GL7 1025 aa13.47□□□□□ -0.25
SND1-208ENST00000470463 RC3H1Q5TC82 1133 aaKnown RBP13.47□□□□□ -0.25
SND1-208ENST00000470463 C16orf71Q8IYS4 520 aaPredicted RBP13.47□□□□□ -0.25
SND1-208ENST00000470463 TBC1D32Q96NH3 1257 aa13.47□□□□□ -0.25
SND1-208ENST00000470463 NHSQ6T4R5 1651 aa13.47□□□□□ -0.25
SND1-208ENST00000470463 CNTNAP4Q9C0A0 1308 aa13.46□□□□□ -0.25
SND1-208ENST00000470463 IFIT2P09913 472 aaKnown RBP13.46□□□□□ -0.25
SND1-208ENST00000470463 GSPT1P15170 499 aaKnown RBP13.46□□□□□ -0.25
SND1-208ENST00000470463 CLEC4GQ6UXB4 293 aa13.46□□□□□ -0.25
SND1-208ENST00000470463 PPP1R1BQ9UD71 204 aaPredicted RBP13.46□□□□□ -0.25
SND1-208ENST00000470463 EPB41L2O43491 1005 aaKnown RBP13.45□□□□□ -0.26
SND1-208ENST00000470463 GLRX3O76003 335 aaKnown RBP13.45□□□□□ -0.26
SND1-208ENST00000470463 REC8O95072 547 aa13.45□□□□□ -0.26
SND1-208ENST00000470463 SDSP20132 328 aa13.45□□□□□ -0.26
SND1-208ENST00000470463 BECN1Q14457 450 aa13.45□□□□□ -0.26
SND1-208ENST00000470463 INTS5Q6P9B9 1019 aaKnown RBP13.45□□□□□ -0.26
SND1-208ENST00000470463 TBC1D9Q6ZT07 1266 aa13.45□□□□□ -0.26
SND1-208ENST00000470463 IL27Q8NEV9 243 aa13.45□□□□□ -0.26
SND1-208ENST00000470463 ARXQ96QS3 562 aa13.45□□□□□ -0.26
SND1-208ENST00000470463 KCNQ2O43526 872 aa13.44□□□□□ -0.26
SND1-208ENST00000470463 CIAO1O76071 339 aa13.44□□□□□ -0.26
SND1-208ENST00000470463 MFAP1P55081 439 aaKnown RBP13.44□□□□□ -0.26
SND1-208ENST00000470463 FOXO4P98177 505 aa13.44□□□□□ -0.26
SND1-208ENST00000470463 LMBR1LQ6UX01 489 aa13.44□□□□□ -0.26
SND1-208ENST00000470463 CNTROBQ8N137 903 aa13.44□□□□□ -0.26
SND1-208ENST00000470463 C22orf23Q9BZE7 217 aa13.44□□□□□ -0.26
SND1-208ENST00000470463 SPON1Q9HCB6 807 aa13.44□□□□□ -0.26
SND1-208ENST00000470463 GPR108Q9NPR9 543 aa13.44□□□□□ -0.26
SND1-208ENST00000470463 IL15P40933 162 aaPredicted RBP13.43□□□□□ -0.26
SND1-208ENST00000470463 RFX5P48382 616 aaPredicted RBP13.43□□□□□ -0.26
SND1-208ENST00000470463 RBM25P49756 843 aaKnown RBP13.43□□□□□ -0.26
SND1-208ENST00000470463 PTPN12Q05209 780 aaKnown RBP13.43□□□□□ -0.26
SND1-208ENST00000470463 CCDC57Q2TAC2 916 aa13.43□□□□□ -0.26
SND1-208ENST00000470463 ERICH6Q7L0X2 663 aa13.43□□□□□ -0.26
SND1-208ENST00000470463 NLRP10Q86W26 655 aa13.43□□□□□ -0.26
SND1-208ENST00000470463 TICAM2Q86XR7 235 aa13.43□□□□□ -0.26
SND1-208ENST00000470463 ZNF34Q8IZ26 560 aa13.43□□□□□ -0.26
SND1-208ENST00000470463 OTUD7AQ8TE49 926 aaPredicted RBP13.43□□□□□ -0.26
SND1-208ENST00000470463 BCL11BQ9C0K0 894 aaPredicted RBP13.43□□□□□ -0.26
SND1-208ENST00000470463 IL1RAPL2Q9NP60 686 aa13.43□□□□□ -0.26
SND1-208ENST00000470463 ECHDC1Q9NTX5 307 aa13.43□□□□□ -0.26
SND1-208ENST00000470463 ANKRD36CQ5JPF3 1778 aa13.43□□□□□ -0.26
SND1-208ENST00000470463 SEC24BO95487 1268 aa13.42□□□□□ -0.26
SND1-208ENST00000470463 ITPK1Q13572 414 aa13.42□□□□□ -0.26
SND1-208ENST00000470463 EPHA10Q5JZY3 1008 aa13.42□□□□□ -0.26
SND1-208ENST00000470463 PA2G4Q9UQ80 394 aaKnown RBP13.42□□□□□ -0.26
SND1-208ENST00000470463 COL5A3P25940 1745 aaPredicted RBP13.42□□□□□ -0.26
SND1-208ENST00000470463 TRIM6-TRIM34B2RNG4 842 aa13.41□□□□□ -0.26
SND1-208ENST00000470463 HIP1O00291 1037 aa13.41□□□□□ -0.26
SND1-208ENST00000470463 PDE8AO60658 829 aa13.41□□□□□ -0.26
SND1-208ENST00000470463 CSF1RP07333 972 aa13.41□□□□□ -0.26
SND1-208ENST00000470463 AACSQ86V21 672 aa13.41□□□□□ -0.26
SND1-208ENST00000470463 TRMT112Q9UI30 125 aaKnown RBP13.41□□□□□ -0.26
SND1-208ENST00000470463 CHMP3Q9Y3E7 222 aa13.41□□□□□ -0.26
SND1-208ENST00000470463 RPS6KA4O75676 772 aa13.4□□□□□ -0.26
SND1-208ENST00000470463 SASH1O94885 1247 aa13.4□□□□□ -0.26
SND1-208ENST00000470463 CAMTA2O94983 1202 aa13.4□□□□□ -0.26
SND1-208ENST00000470463 IFIT5Q13325 482 aaKnown RBP13.4□□□□□ -0.26
SND1-208ENST00000470463 HLFQ16534 295 aa13.4□□□□□ -0.26
SND1-208ENST00000470463 NUTM1Q86Y26 1132 aa13.4□□□□□ -0.26
SND1-208ENST00000470463 PI4K2BQ8TCG2 481 aa13.4□□□□□ -0.26
SND1-208ENST00000470463 RUFY2Q8WXA3 655 aa13.4□□□□□ -0.26
SND1-208ENST00000470463 TBC1D2BQ9UPU7 963 aa13.4□□□□□ -0.26
SND1-208ENST00000470463 AKAP2Q9Y2D5 859 aa13.4□□□□□ -0.26
SND1-208ENST00000470463 SH3TC1Q8TE82 1336 aa13.39□□□□□ -0.27
SND1-208ENST00000470463 BTAF1O14981 1849 aa13.39□□□□□ -0.27
SND1-208ENST00000470463 NUP98P52948 1817 aa13.39□□□□□ -0.27
SND1-208ENST00000470463 EYA2O00167 538 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms