RNA–Protein interactions for RNA: ENST00000470408.5

UBE3C-205, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 5,197 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-205ENST00000470408 RUFY1Q96T51 708 aa11.09□□□□□ -0.63
UBE3C-205ENST00000470408 PYM1Q9BRP8 204 aaKnown RBP11.09□□□□□ -0.63
UBE3C-205ENST00000470408 MYO6Q9UM54 1294 aa11.09□□□□□ -0.63
UBE3C-205ENST00000470408 CBFA2T2O43439 604 aa11.08□□□□□ -0.63
UBE3C-205ENST00000470408 MRPL50Q8N5N7 158 aaKnown RBP11.08□□□□□ -0.63
UBE3C-205ENST00000470408 GNAQP50148 359 aa11.08□□□□□ -0.64
UBE3C-205ENST00000470408 RBM10P98175 930 aaKnown RBP11.08□□□□□ -0.64
UBE3C-205ENST00000470408 PPP4R3AQ6IN85 833 aa11.08□□□□□ -0.64
UBE3C-205ENST00000470408 CEP57L1Q8IYX8 460 aa11.08□□□□□ -0.64
UBE3C-205ENST00000470408 FLAD1Q8NFF5 587 aa11.08□□□□□ -0.64
UBE3C-205ENST00000470408 SPATA32Q96LK8 384 aa11.08□□□□□ -0.64
UBE3C-205ENST00000470408 ZC3H12CQ9C0D7 883 aaKnown RBP11.08□□□□□ -0.64
UBE3C-205ENST00000470408 CNNM2Q9H8M5 875 aa11.08□□□□□ -0.64
UBE3C-205ENST00000470408 SPINK5Q9NQ38 1064 aaPredicted RBP11.08□□□□□ -0.64
UBE3C-205ENST00000470408 INSRP06213 1382 aa11.08□□□□□ -0.64
UBE3C-205ENST00000470408 IFIT3O14879 490 aaKnown RBP11.08□□□□□ -0.64
UBE3C-205ENST00000470408 GNAT2P19087 354 aa11.08□□□□□ -0.64
UBE3C-205ENST00000470408 CCDC96Q2M329 555 aa11.08□□□□□ -0.64
UBE3C-205ENST00000470408 SCAND2PQ9GZW5 306 aaPredicted RBP11.08□□□□□ -0.64
UBE3C-205ENST00000470408 NPHP4O75161 1426 aaPredicted RBP11.08□□□□□ -0.64
UBE3C-205ENST00000470408 YEATS2Q9ULM3 1422 aa11.08□□□□□ -0.64
UBE3C-205ENST00000470408 ARAP3Q8WWN8 1544 aa11.08□□□□□ -0.64
UBE3C-205ENST00000470408 NAP1L1P55209 391 aaKnown RBP11.08□□□□□ -0.64
UBE3C-205ENST00000470408 SLC39A6Q13433 755 aa11.08□□□□□ -0.64
UBE3C-205ENST00000470408 TMEM266Q2M3C6 531 aa11.08□□□□□ -0.64
UBE3C-205ENST00000470408 CERS3Q8IU89 383 aa11.08□□□□□ -0.64
UBE3C-205ENST00000470408 ORAI2Q96SN7 254 aa11.08□□□□□ -0.64
UBE3C-205ENST00000470408 KRT23Q9C075 422 aa11.08□□□□□ -0.64
UBE3C-205ENST00000470408 RNF214Q8ND24 703 aa11.07□□□□□ -0.64
UBE3C-205ENST00000470408 JDP2Q8WYK2 163 aa11.07□□□□□ -0.64
UBE3C-205ENST00000470408 FEZ1Q99689 392 aa11.07□□□□□ -0.64
UBE3C-205ENST00000470408 GOLIM4O00461 696 aa11.07□□□□□ -0.64
UBE3C-205ENST00000470408 PPP1R12BO60237 982 aaPredicted RBP11.07□□□□□ -0.64
UBE3C-205ENST00000470408 NF2P35240 595 aa11.07□□□□□ -0.64
UBE3C-205ENST00000470408 LMBR1LQ6UX01 489 aa11.07□□□□□ -0.64
UBE3C-205ENST00000470408 STK11IPQ8N1F8 1099 aa11.07□□□□□ -0.64
UBE3C-205ENST00000470408 UQCRHLA0A096LP55 91 aa11.07□□□□□ -0.64
UBE3C-205ENST00000470408 UQCRHP07919 91 aa11.07□□□□□ -0.64
UBE3C-205ENST00000470408 MFSD6Q6ZSS7 791 aa11.07□□□□□ -0.64
UBE3C-205ENST00000470408 NCOA7Q8NI08 942 aa11.07□□□□□ -0.64
UBE3C-205ENST00000470408 PODXL2Q9NZ53 605 aa11.07□□□□□ -0.64
UBE3C-205ENST00000470408 LIMCH1Q9UPQ0 1083 aa11.07□□□□□ -0.64
UBE3C-205ENST00000470408 ERVV-2B6SEH9 535 aa11.07□□□□□ -0.64
UBE3C-205ENST00000470408 PRPF40AO75400 957 aaKnown RBP11.07□□□□□ -0.64
UBE3C-205ENST00000470408 DESP17661 470 aa11.07□□□□□ -0.64
UBE3C-205ENST00000470408 RBM17Q96I25 401 aaKnown RBP11.07□□□□□ -0.64
UBE3C-205ENST00000470408 CARD14Q9BXL6 1004 aa11.07□□□□□ -0.64
UBE3C-205ENST00000470408 TNMDQ9H2S6 317 aa11.07□□□□□ -0.64
UBE3C-205ENST00000470408 RBM27Q9P2N5 1060 aaKnown RBP11.07□□□□□ -0.64
UBE3C-205ENST00000470408 MAGI3Q5TCQ9 1506 aa11.07□□□□□ -0.64
UBE3C-205ENST00000470408 MCM4P33991 863 aa11.06□□□□□ -0.64
UBE3C-205ENST00000470408 PDE4CQ08493 712 aa11.06□□□□□ -0.64
UBE3C-205ENST00000470408 TTC41PQ6P2S7 1318 aa11.06□□□□□ -0.64
UBE3C-205ENST00000470408 BAG4O95429 457 aaKnown RBP11.06□□□□□ -0.64
UBE3C-205ENST00000470408 SSRP1Q08945 709 aaKnown RBP11.06□□□□□ -0.64
UBE3C-205ENST00000470408 TRIM5Q9C035 493 aa11.06□□□□□ -0.64
UBE3C-205ENST00000470408 SMARCA5O60264 1052 aaPredicted RBP11.06□□□□□ -0.64
UBE3C-205ENST00000470408 C8orf76Q96K31 380 aa11.06□□□□□ -0.64
UBE3C-205ENST00000470408 ZRANB1Q9UGI0 708 aa11.06□□□□□ -0.64
UBE3C-205ENST00000470408 CCNL1Q9UK58 526 aaPredicted RBP11.06□□□□□ -0.64
UBE3C-205ENST00000470408 GOLGA8AA7E2F4 631 aa11.06□□□□□ -0.64
UBE3C-205ENST00000470408 GOLGA8BA8MQT2 603 aa11.06□□□□□ -0.64
UBE3C-205ENST00000470408 PLBD2Q8NHP8 589 aa11.06□□□□□ -0.64
UBE3C-205ENST00000470408 RTL1A6NKG5 1358 aa11.06□□□□□ -0.64
UBE3C-205ENST00000470408 CCDC194A0A1B0GVG4 234 aa11.05□□□□□ -0.64
UBE3C-205ENST00000470408 SMTNL1A8MU46 457 aa11.05□□□□□ -0.64
UBE3C-205ENST00000470408 B4DLN1 442 aa11.05□□□□□ -0.64
UBE3C-205ENST00000470408 IRS4O14654 1257 aaPredicted RBP11.05□□□□□ -0.64
UBE3C-205ENST00000470408 MRPL12P52815 198 aaKnown RBP11.05□□□□□ -0.64
UBE3C-205ENST00000470408 ZNF790Q6PG37 636 aa11.05□□□□□ -0.64
UBE3C-205ENST00000470408 KAT14Q9H8E8 782 aa11.05□□□□□ -0.64
UBE3C-205ENST00000470408 KDM4AO75164 1064 aa11.05□□□□□ -0.64
UBE3C-205ENST00000470408 IL13P35225 146 aa11.05□□□□□ -0.64
UBE3C-205ENST00000470408 ZSCAN30Q86W11 494 aa11.05□□□□□ -0.64
UBE3C-205ENST00000470408 TSPY2A6NKD2 308 aa11.05□□□□□ -0.64
UBE3C-205ENST00000470408 BAG6P46379 1132 aa11.05□□□□□ -0.64
UBE3C-205ENST00000470408 LEKR1Q6ZMV7 388 aa11.05□□□□□ -0.64
UBE3C-205ENST00000470408 LTKP29376 864 aa11.05□□□□□ -0.64
UBE3C-205ENST00000470408 CCDC191Q8NCU4 936 aa11.05□□□□□ -0.64
UBE3C-205ENST00000470408 USP21Q9UK80 565 aa11.05□□□□□ -0.64
UBE3C-205ENST00000470408 VAMP4O75379 141 aa11.05□□□□□ -0.64
UBE3C-205ENST00000470408 PDCL2Q8N4E4 241 aa11.05□□□□□ -0.64
UBE3C-205ENST00000470408 PDILTQ8N807 584 aa11.05□□□□□ -0.64
UBE3C-205ENST00000470408 C8orf58Q8NAV2 365 aa11.05□□□□□ -0.64
UBE3C-205ENST00000470408 ESR2Q92731 530 aa11.05□□□□□ -0.64
UBE3C-205ENST00000470408 PDCL3Q9H2J4 239 aa11.05□□□□□ -0.64
UBE3C-205ENST00000470408 ZHX3Q9H4I2 956 aa11.05□□□□□ -0.64
UBE3C-205ENST00000470408 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.05□□□□□ -0.641e-6■■□□□ 11.7
UBE3C-205ENST00000470408 SAMD9LQ8IVG5 1584 aa11.04□□□□□ -0.64
UBE3C-205ENST00000470408 FGFR1OPO95684 399 aaKnown RBP11.04□□□□□ -0.64
UBE3C-205ENST00000470408 BMP15O95972 392 aa11.04□□□□□ -0.64
UBE3C-205ENST00000470408 TTC22Q5TAA0 569 aa11.04□□□□□ -0.64
UBE3C-205ENST00000470408 NAA16Q6N069 864 aaPredicted RBP11.04□□□□□ -0.64
UBE3C-205ENST00000470408 PPFIBP1Q86W92 1011 aa11.04□□□□□ -0.64
UBE3C-205ENST00000470408 SH3TC1Q8TE82 1336 aa11.04□□□□□ -0.64
UBE3C-205ENST00000470408 ERBB4Q15303 1308 aa11.04□□□□□ -0.64
UBE3C-205ENST00000470408 SUPT20HQ8NEM7 779 aa11.04□□□□□ -0.64
UBE3C-205ENST00000470408 LRRC27Q9C0I9 530 aa11.04□□□□□ -0.64
UBE3C-205ENST00000470408 ZNF219Q9P2Y4 722 aaPredicted RBP11.04□□□□□ -0.64
UBE3C-205ENST00000470408 HECW2Q9P2P5 1572 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms