RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 FER1L6Q2WGJ9 1857 aa18.24■□□□□ 0.51
TOP3B-215ENST00000470338 CRY2Q49AN0 593 aa18.24■□□□□ 0.51
TOP3B-215ENST00000470338 SLC10A5Q5PT55 438 aa18.24■□□□□ 0.51
TOP3B-215ENST00000470338 NLRP10Q86W26 655 aa18.24■□□□□ 0.51
TOP3B-215ENST00000470338 UTP14AQ9BVJ6 771 aaKnown RBP18.24■□□□□ 0.51
TOP3B-215ENST00000470338 RNF123Q5XPI4 1314 aa18.23■□□□□ 0.51
TOP3B-215ENST00000470338 GOLGA2Q08379 1002 aa18.23■□□□□ 0.51
TOP3B-215ENST00000470338 ISCA1Q9BUE6 129 aa18.23■□□□□ 0.51
TOP3B-215ENST00000470338 DIEXFQ68CQ4 756 aaKnown RBP18.22■□□□□ 0.51
TOP3B-215ENST00000470338 PRPF40BQ6NWY9 871 aaKnown RBP18.22■□□□□ 0.51
TOP3B-215ENST00000470338 MYH16Q9H6N6 1097 aa18.22■□□□□ 0.51
TOP3B-215ENST00000470338 LAMB2P55268 1798 aa18.22■□□□□ 0.51
TOP3B-215ENST00000470338 C21orf2O43822 256 aa18.21■□□□□ 0.51
TOP3B-215ENST00000470338 VAMP4O75379 141 aa18.21■□□□□ 0.51
TOP3B-215ENST00000470338 EXOSC9Q06265 439 aaKnown RBP18.21■□□□□ 0.51
TOP3B-215ENST00000470338 TRIM28Q13263 835 aaKnown RBP18.21■□□□□ 0.51
TOP3B-215ENST00000470338 RIC3Q7Z5B4 369 aa18.21■□□□□ 0.51
TOP3B-215ENST00000470338 C7orf43Q8WVR3 580 aa18.21■□□□□ 0.51
TOP3B-215ENST00000470338 STK31Q9BXU1 1019 aa18.21■□□□□ 0.51
TOP3B-215ENST00000470338 DICER1Q9UPY3 1922 aaKnown RBP18.2■□□□□ 0.5
TOP3B-215ENST00000470338 ALDH1B1P30837 517 aa18.2■□□□□ 0.5
TOP3B-215ENST00000470338 HOXA10P31260 410 aaPredicted RBP18.2■□□□□ 0.5
TOP3B-215ENST00000470338 C9orf131Q5VYM1 1079 aa18.2■□□□□ 0.5
TOP3B-215ENST00000470338 TRMT112Q9UI30 125 aaKnown RBP18.2■□□□□ 0.5
TOP3B-215ENST00000470338 NFKBIEO00221 500 aa18.19■□□□□ 0.5
TOP3B-215ENST00000470338 NLRP3Q96P20 1036 aa18.19■□□□□ 0.5
TOP3B-215ENST00000470338 DDX60Q8IY21 1712 aaKnown RBP18.18■□□□□ 0.5
TOP3B-215ENST00000470338 ATP5J2-PTCD1G3V325 749 aa18.18■□□□□ 0.5
TOP3B-215ENST00000470338 TCERG1O14776 1098 aaKnown RBP18.18■□□□□ 0.5
TOP3B-215ENST00000470338 DDX58O95786 925 aaKnown RBP18.18■□□□□ 0.5
TOP3B-215ENST00000470338 SLC4A2P04920 1241 aa18.18■□□□□ 0.5
TOP3B-215ENST00000470338 RASSF7Q02833 373 aa18.18■□□□□ 0.5
TOP3B-215ENST00000470338 SOGA3Q5TF21 947 aa18.18■□□□□ 0.5
TOP3B-215ENST00000470338 C3orf67Q6ZVT6 689 aa18.18■□□□□ 0.5
TOP3B-215ENST00000470338 SYNE4Q8N205 404 aa18.18■□□□□ 0.5
TOP3B-215ENST00000470338 ZNF219Q9P2Y4 722 aaPredicted RBP18.18■□□□□ 0.5
TOP3B-215ENST00000470338 SH3TC1Q8TE82 1336 aa18.18■□□□□ 0.5
TOP3B-215ENST00000470338 PRELPP51888 382 aa18.17■□□□□ 0.5
TOP3B-215ENST00000470338 KSR2Q6VAB6 950 aa18.17■□□□□ 0.5
TOP3B-215ENST00000470338 G2E3Q7L622 706 aa18.17■□□□□ 0.5
TOP3B-215ENST00000470338 MIER1Q8N108 512 aa18.17■□□□□ 0.5
TOP3B-215ENST00000470338 RPGRQ92834 1020 aaKnown RBP18.17■□□□□ 0.5
TOP3B-215ENST00000470338 METTL22Q9BUU2 404 aaPredicted RBP18.17■□□□□ 0.5
TOP3B-215ENST00000470338 LMNB1P20700 586 aa18.16■□□□□ 0.5
TOP3B-215ENST00000470338 RBM17Q96I25 401 aaKnown RBP18.16■□□□□ 0.5
TOP3B-215ENST00000470338 CRAMP1Q96RY5 1269 aa18.16■□□□□ 0.5
TOP3B-215ENST00000470338 RNF181Q9P0P0 153 aa18.16■□□□□ 0.5
TOP3B-215ENST00000470338 LTBP3Q9NS15 1303 aa18.16■□□□□ 0.5
TOP3B-215ENST00000470338 PI4KAP2A4QPH2 592 aa18.15■□□□□ 0.5
TOP3B-215ENST00000470338 HCLS1P14317 486 aaPredicted RBP18.15■□□□□ 0.5
TOP3B-215ENST00000470338 PI4KAP1Q8N8J0 262 aa18.15■□□□□ 0.5
TOP3B-215ENST00000470338 MYD88Q99836 296 aa18.15■□□□□ 0.5
TOP3B-215ENST00000470338 MAP3K2Q9Y2U5 619 aa18.15■□□□□ 0.5
TOP3B-215ENST00000470338 TAF1P21675 1872 aa18.14■□□□□ 0.49
TOP3B-215ENST00000470338 CCDC191Q8NCU4 936 aa18.14■□□□□ 0.49
TOP3B-215ENST00000470338 ZNF428Q96B54 188 aa18.14■□□□□ 0.49
TOP3B-215ENST00000470338 FAM89AQ96GI7 184 aa18.14■□□□□ 0.49
TOP3B-215ENST00000470338 E9PSI1 815 aa18.13■□□□□ 0.49
TOP3B-215ENST00000470338 SLFN5Q08AF3 891 aa18.13■□□□□ 0.49
TOP3B-215ENST00000470338 FLIIQ13045 1269 aa18.13■□□□□ 0.49
TOP3B-215ENST00000470338 CCDC93Q567U6 631 aa18.13■□□□□ 0.49
TOP3B-215ENST00000470338 TAOK3Q9H2K8 898 aa18.13■□□□□ 0.49
TOP3B-215ENST00000470338 GPBP1L1Q9HC44 474 aaPredicted RBP18.13■□□□□ 0.49
TOP3B-215ENST00000470338 ZC3H4Q9UPT8 1303 aaKnown RBP18.13■□□□□ 0.49
TOP3B-215ENST00000470338 TIAM2Q8IVF5 1701 aa18.12■□□□□ 0.49
TOP3B-215ENST00000470338 OLFM4Q6UX06 510 aa18.12■□□□□ 0.49
TOP3B-215ENST00000470338 RTKN2Q8IZC4 609 aa18.12■□□□□ 0.49
TOP3B-215ENST00000470338 ZBTB38Q8NAP3 1195 aaPredicted RBP18.12■□□□□ 0.49
TOP3B-215ENST00000470338 SNED1Q8TER0 1413 aa18.12■□□□□ 0.49
TOP3B-215ENST00000470338 IGKV5-2P06315 115 aa18.11■□□□□ 0.49
TOP3B-215ENST00000470338 CC2D2BQ6DHV5 1058 aa18.11■□□□□ 0.49
TOP3B-215ENST00000470338 ZNF526Q8TF50 670 aaPredicted RBP18.11■□□□□ 0.49
TOP3B-215ENST00000470338 CWC25Q9NXE8 425 aaPredicted RBP18.11■□□□□ 0.49
TOP3B-215ENST00000470338 ABCC4O15439 1325 aa18.1■□□□□ 0.49
TOP3B-215ENST00000470338 PCCAP05165 728 aaPredicted RBP18.1■□□□□ 0.49
TOP3B-215ENST00000470338 SF3B3Q15393 1217 aaKnown RBP18.1■□□□□ 0.49
TOP3B-215ENST00000470338 RTL5Q5HYW3 569 aaPredicted RBP18.1■□□□□ 0.49
TOP3B-215ENST00000470338 TRMT2AQ8IZ69 625 aaKnown RBP18.1■□□□□ 0.49
TOP3B-215ENST00000470338 IRS4O14654 1257 aaPredicted RBP18.09■□□□□ 0.49
TOP3B-215ENST00000470338 BBOX1O75936 387 aa18.09■□□□□ 0.49
TOP3B-215ENST00000470338 FKBP4Q02790 459 aaKnown RBP eCLIP18.09■□□□□ 0.49
TOP3B-215ENST00000470338 NEXNQ0ZGT2 675 aa18.09■□□□□ 0.49
TOP3B-215ENST00000470338 FKBP5Q13451 457 aaPredicted RBP18.09■□□□□ 0.49
TOP3B-215ENST00000470338 GRIPAP1Q4V328 841 aa18.09■□□□□ 0.49
TOP3B-215ENST00000470338 CDCA7LQ96GN5 454 aa18.09■□□□□ 0.49
TOP3B-215ENST00000470338 MYH3P11055 1940 aa18.08■□□□□ 0.49
TOP3B-215ENST00000470338 PPEF1O14829 653 aaPredicted RBP18.08■□□□□ 0.48
TOP3B-215ENST00000470338 HSP90B1P14625 803 aaKnown RBP18.08■□□□□ 0.48
TOP3B-215ENST00000470338 DDX46Q7L014 1031 aaKnown RBP18.08■□□□□ 0.48
TOP3B-215ENST00000470338 DNAAF4Q8WXU2 420 aa18.08■□□□□ 0.48
TOP3B-215ENST00000470338 NEURL1BA8MQ27 555 aa18.07■□□□□ 0.48
TOP3B-215ENST00000470338 PSMD1Q99460 953 aa18.07■□□□□ 0.48
TOP3B-215ENST00000470338 ATP6V0A2Q9Y487 856 aa18.07■□□□□ 0.48
TOP3B-215ENST00000470338 CDHR2Q9BYE9 1310 aa18.06■□□□□ 0.48
TOP3B-215ENST00000470338 GRAPQ13588 217 aa18.06■□□□□ 0.48
TOP3B-215ENST00000470338 CWF19L2Q2TBE0 894 aaKnown RBP18.06■□□□□ 0.48
TOP3B-215ENST00000470338 GRAPLQ8TC17 118 aaPredicted RBP18.06■□□□□ 0.48
TOP3B-215ENST00000470338 KDM2BQ8NHM5 1336 aa18.05■□□□□ 0.48
TOP3B-215ENST00000470338 GLTPD2A6NH11 291 aa18.05■□□□□ 0.48
TOP3B-215ENST00000470338 KIF3CO14782 793 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms