RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 UBR2Q8IWV8 1755 aa11.99□□□□□ -0.49
SYNGAP1-205ENST00000470232 TNRC18O15417 2968 aaPredicted RBP11.99□□□□□ -0.49
SYNGAP1-205ENST00000470232 TRPM7Q96QT4 1865 aa11.98□□□□□ -0.49
SYNGAP1-205ENST00000470232 GNAT3A8MTJ3 354 aa11.98□□□□□ -0.49
SYNGAP1-205ENST00000470232 RGL2O15211 777 aa11.98□□□□□ -0.49
SYNGAP1-205ENST00000470232 CENPBP07199 599 aaPredicted RBP11.98□□□□□ -0.49
SYNGAP1-205ENST00000470232 EPS15P42566 896 aa11.98□□□□□ -0.49
SYNGAP1-205ENST00000470232 GAS2L2Q8NHY3 880 aa11.98□□□□□ -0.49
SYNGAP1-205ENST00000470232 TMX4Q9H1E5 349 aaPredicted RBP11.98□□□□□ -0.49
SYNGAP1-205ENST00000470232 NIP7Q9Y221 180 aaKnown RBP eCLIP11.98□□□□□ -0.49
SYNGAP1-205ENST00000470232 DIAPH1O60610 1272 aaKnown RBP11.97□□□□□ -0.49
SYNGAP1-205ENST00000470232 OLFM4Q6UX06 510 aa11.97□□□□□ -0.49
SYNGAP1-205ENST00000470232 SAPCD2Q86UD0 394 aa11.97□□□□□ -0.49
SYNGAP1-205ENST00000470232 LARGE2Q8N3Y3 721 aa11.97□□□□□ -0.49
SYNGAP1-205ENST00000470232 ADARB2Q9NS39 739 aaKnown RBP11.97□□□□□ -0.49
SYNGAP1-205ENST00000470232 TIMELESSQ9UNS1 1208 aa11.97□□□□□ -0.49
SYNGAP1-205ENST00000470232 THSD7BQ9C0I4 1608 aa11.97□□□□□ -0.49
SYNGAP1-205ENST00000470232 CASP8AP2Q9UKL3 1982 aa11.96□□□□□ -0.49
SYNGAP1-205ENST00000470232 ZBTB22O15209 634 aa11.96□□□□□ -0.49
SYNGAP1-205ENST00000470232 CELF2O95319 508 aaKnown RBP11.96□□□□□ -0.49
SYNGAP1-205ENST00000470232 FMR1Q06787 632 aaKnown RBP eCLIP11.96□□□□□ -0.49
SYNGAP1-205ENST00000470232 NYXQ9GZU5 481 aa11.96□□□□□ -0.49
SYNGAP1-205ENST00000470232 PDE4DIPQ5VU43 2346 aa11.95□□□□□ -0.5
SYNGAP1-205ENST00000470232 FAM177BA6PVY3 158 aa11.95□□□□□ -0.5
SYNGAP1-205ENST00000470232 BTBD11A6QL63 1104 aa11.95□□□□□ -0.5
SYNGAP1-205ENST00000470232 TRAF5O00463 557 aa11.95□□□□□ -0.5
SYNGAP1-205ENST00000470232 SCNN1DP51172 638 aa11.95□□□□□ -0.5
SYNGAP1-205ENST00000470232 NIM1KQ8IY84 436 aa11.95□□□□□ -0.5
SYNGAP1-205ENST00000470232 IL17REQ8NFR9 667 aa11.95□□□□□ -0.5
SYNGAP1-205ENST00000470232 VPS33BQ9H267 617 aa11.95□□□□□ -0.5
SYNGAP1-205ENST00000470232 NOGQ13253 232 aa11.94□□□□□ -0.5
SYNGAP1-205ENST00000470232 CIAPIN1Q6FI81 312 aa11.94□□□□□ -0.5
SYNGAP1-205ENST00000470232 RPGRQ92834 1020 aaKnown RBP11.94□□□□□ -0.5
SYNGAP1-205ENST00000470232 USP16Q9Y5T5 823 aa11.94□□□□□ -0.5
SYNGAP1-205ENST00000470232 SNRPA1P09661 255 aaKnown RBP11.93□□□□□ -0.5
SYNGAP1-205ENST00000470232 EIF4G2P78344 907 aaKnown RBP eCLIP11.93□□□□□ -0.5
SYNGAP1-205ENST00000470232 PRPF38BQ5VTL8 546 aaKnown RBP11.93□□□□□ -0.5
SYNGAP1-205ENST00000470232 ZC3H15Q8WU90 426 aaKnown RBP11.93□□□□□ -0.5
SYNGAP1-205ENST00000470232 RBM17Q96I25 401 aaKnown RBP11.93□□□□□ -0.5
SYNGAP1-205ENST00000470232 BCORQ6W2J9 1755 aa11.92□□□□□ -0.5
SYNGAP1-205ENST00000470232 CDC37L1Q7L3B6 337 aa11.92□□□□□ -0.5
SYNGAP1-205ENST00000470232 GPRC5DQ9NZD1 345 aa11.92□□□□□ -0.5
SYNGAP1-205ENST00000470232 PPIP5K2O43314 1243 aa11.91□□□□□ -0.5
SYNGAP1-205ENST00000470232 HOXA10P31260 410 aaPredicted RBP11.91□□□□□ -0.5
SYNGAP1-205ENST00000470232 CRY2Q49AN0 593 aa11.91□□□□□ -0.5
SYNGAP1-205ENST00000470232 SUPT20HQ8NEM7 779 aa11.91□□□□□ -0.5
SYNGAP1-205ENST00000470232 ZNF408Q9H9D4 720 aa11.91□□□□□ -0.5
SYNGAP1-205ENST00000470232 SAGE1Q9NXZ1 904 aa11.91□□□□□ -0.5
SYNGAP1-205ENST00000470232 PGAP2Q9UHJ9 254 aa11.91□□□□□ -0.5
SYNGAP1-205ENST00000470232 CLSPNQ9HAW4 1339 aa11.9□□□□□ -0.5
SYNGAP1-205ENST00000470232 U2SURPO15042 1029 aaKnown RBP11.9□□□□□ -0.5
SYNGAP1-205ENST00000470232 PIP4K2AP48426 406 aaPredicted RBP11.9□□□□□ -0.5
SYNGAP1-205ENST00000470232 LTBP1Q14766 1721 aa11.9□□□□□ -0.5
SYNGAP1-205ENST00000470232 TNIP1Q15025 636 aa11.9□□□□□ -0.5
SYNGAP1-205ENST00000470232 CRAMP1Q96RY5 1269 aa11.9□□□□□ -0.5
SYNGAP1-205ENST00000470232 BCL2L13Q9BXK5 485 aa11.9□□□□□ -0.5
SYNGAP1-205ENST00000470232 GLIS2Q9BZE0 524 aaPredicted RBP11.9□□□□□ -0.5
SYNGAP1-205ENST00000470232 ZNRF3Q9ULT6 936 aa11.9□□□□□ -0.5
SYNGAP1-205ENST00000470232 KIF7Q2M1P5 1343 aa11.89□□□□□ -0.51
SYNGAP1-205ENST00000470232 CDHR2Q9BYE9 1310 aa11.89□□□□□ -0.51
SYNGAP1-205ENST00000470232 KCNQ3O43525 872 aa11.89□□□□□ -0.51
SYNGAP1-205ENST00000470232 SOX10P56693 466 aa11.89□□□□□ -0.51
SYNGAP1-205ENST00000470232 HUNKP57058 714 aa11.89□□□□□ -0.51
SYNGAP1-205ENST00000470232 RTF1Q92541 710 aaKnown RBP11.89□□□□□ -0.51
SYNGAP1-205ENST00000470232 CCDC102AQ96A19 550 aa11.89□□□□□ -0.51
SYNGAP1-205ENST00000470232 GCC1Q96CN9 775 aa11.89□□□□□ -0.51
SYNGAP1-205ENST00000470232 ERVV-1B6SEH8 477 aa11.88□□□□□ -0.51
SYNGAP1-205ENST00000470232 H7C1D1 291 aa11.88□□□□□ -0.51
SYNGAP1-205ENST00000470232 TCERG1O14776 1098 aaKnown RBP11.88□□□□□ -0.51
SYNGAP1-205ENST00000470232 PPEF1O14829 653 aaPredicted RBP11.88□□□□□ -0.51
SYNGAP1-205ENST00000470232 CXCL9Q07325 125 aa11.88□□□□□ -0.51
SYNGAP1-205ENST00000470232 HLFQ16534 295 aa11.88□□□□□ -0.51
SYNGAP1-205ENST00000470232 AMER1Q5JTC6 1135 aaPredicted RBP11.88□□□□□ -0.51
SYNGAP1-205ENST00000470232 C2orf69Q8N8R5 385 aa11.88□□□□□ -0.51
SYNGAP1-205ENST00000470232 CEMIPQ8WUJ3 1361 aa11.88□□□□□ -0.51
SYNGAP1-205ENST00000470232 NPC1L1Q9UHC9 1359 aa11.88□□□□□ -0.51
SYNGAP1-205ENST00000470232 SNED1Q8TER0 1413 aa11.87□□□□□ -0.51
SYNGAP1-205ENST00000470232 HSPA5P11021 654 aaKnown RBP11.87□□□□□ -0.51
SYNGAP1-205ENST00000470232 GMPSP49915 693 aaPredicted RBP11.87□□□□□ -0.51
SYNGAP1-205ENST00000470232 AOC3Q16853 763 aa11.87□□□□□ -0.51
SYNGAP1-205ENST00000470232 RGMBQ6NW40 437 aa11.87□□□□□ -0.51
SYNGAP1-205ENST00000470232 NUTM1Q86Y26 1132 aa11.87□□□□□ -0.51
SYNGAP1-205ENST00000470232 REM2Q8IYK8 340 aaPredicted RBP11.87□□□□□ -0.51
SYNGAP1-205ENST00000470232 NBPF15Q8N660 670 aa11.87□□□□□ -0.51
SYNGAP1-205ENST00000470232 SIPA1L3O60292 1781 aaPredicted RBP11.87□□□□□ -0.51
SYNGAP1-205ENST00000470232 PRAMEF22A3QJZ6 481 aa11.86□□□□□ -0.51
SYNGAP1-205ENST00000470232 NBPF26B4DH59 902 aa11.86□□□□□ -0.51
SYNGAP1-205ENST00000470232 ABCB7O75027 752 aa11.86□□□□□ -0.51
SYNGAP1-205ENST00000470232 NBPF10Q6P3W6 841 aaKnown RBP11.86□□□□□ -0.51
SYNGAP1-205ENST00000470232 KIF6Q6ZMV9 814 aa11.86□□□□□ -0.51
SYNGAP1-205ENST00000470232 NLRP3Q96P20 1036 aa11.86□□□□□ -0.51
SYNGAP1-205ENST00000470232 TRPA1O75762 1119 aa11.85□□□□□ -0.51
SYNGAP1-205ENST00000470232 ZNF157P51786 506 aaPredicted RBP11.85□□□□□ -0.51
SYNGAP1-205ENST00000470232 KIF23Q02241 960 aaPredicted RBP11.85□□□□□ -0.51
SYNGAP1-205ENST00000470232 PKN2Q16513 984 aaKnown RBP11.85□□□□□ -0.51
SYNGAP1-205ENST00000470232 PPP1R42Q7Z4L9 355 aa11.85□□□□□ -0.51
SYNGAP1-205ENST00000470232 CTU1Q7Z7A3 348 aaKnown RBP11.85□□□□□ -0.51
SYNGAP1-205ENST00000470232 USP48Q86UV5 1035 aa11.85□□□□□ -0.51
SYNGAP1-205ENST00000470232 CNOT7Q9UIV1 285 aaKnown RBP11.85□□□□□ -0.51
SYNGAP1-205ENST00000470232 ATP6V0A2Q9Y487 856 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms