RNA–Protein interactions for RNA: ENST00000469187.5

TRIM6-206, Transcript of tripartite motif containing 6, humanhuman

TSL 2

Gene TRIM6, Length 1,050 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-206ENST00000469187 ATP10DQ9P241 1426 aa13.43□□□□□ -0.26
TRIM6-206ENST00000469187 PNPLA7Q6ZV29 1317 aa13.42□□□□□ -0.26
TRIM6-206ENST00000469187 TNS1Q9HBL0 1735 aaKnown RBP13.42□□□□□ -0.26
TRIM6-206ENST00000469187 PCCAP05165 728 aaPredicted RBP13.42□□□□□ -0.26
TRIM6-206ENST00000469187 NBPF7P0C2Y1 421 aaPredicted RBP13.42□□□□□ -0.26
TRIM6-206ENST00000469187 UBE3BQ7Z3V4 1068 aa13.42□□□□□ -0.26
TRIM6-206ENST00000469187 NBPF5PQ86XG9 351 aaPredicted RBP13.42□□□□□ -0.26
TRIM6-206ENST00000469187 ZBTB38Q8NAP3 1195 aaPredicted RBP13.42□□□□□ -0.26
TRIM6-206ENST00000469187 SLC16A10Q8TF71 515 aa13.42□□□□□ -0.26
TRIM6-206ENST00000469187 FAM89AQ96GI7 184 aa13.42□□□□□ -0.26
TRIM6-206ENST00000469187 PPP4R2Q9NY27 417 aa13.42□□□□□ -0.26
TRIM6-206ENST00000469187 CICQ96RK0 1608 aaPredicted RBP13.42□□□□□ -0.26
TRIM6-206ENST00000469187 TM4SF1P30408 202 aa13.41□□□□□ -0.26
TRIM6-206ENST00000469187 RPAP2Q8IXW5 612 aaPredicted RBP13.41□□□□□ -0.26
TRIM6-206ENST00000469187 PARP3Q9Y6F1 533 aa13.41□□□□□ -0.26
TRIM6-206ENST00000469187 COL5A3P25940 1745 aaPredicted RBP13.41□□□□□ -0.26
TRIM6-206ENST00000469187 TAF1LQ8IZX4 1826 aa13.41□□□□□ -0.26
TRIM6-206ENST00000469187 NFIXQ14938 502 aa13.4□□□□□ -0.26
TRIM6-206ENST00000469187 CCDC136Q96JN2 1154 aa13.4□□□□□ -0.26
TRIM6-206ENST00000469187 RWDD1Q9H446 243 aaPredicted RBP13.4□□□□□ -0.26
TRIM6-206ENST00000469187 LRRFIP2Q9Y608 721 aaKnown RBP13.4□□□□□ -0.26
TRIM6-206ENST00000469187 PXDNLA1KZ92 1463 aa13.4□□□□□ -0.26
TRIM6-206ENST00000469187 UTYO14607 1347 aa13.39□□□□□ -0.27
TRIM6-206ENST00000469187 SH3TC1Q8TE82 1336 aa13.39□□□□□ -0.27
TRIM6-206ENST00000469187 IRS4O14654 1257 aaPredicted RBP13.39□□□□□ -0.27
TRIM6-206ENST00000469187 SERPINB2P05120 415 aa13.39□□□□□ -0.27
TRIM6-206ENST00000469187 ATP8B2P98198 1209 aa13.39□□□□□ -0.27
TRIM6-206ENST00000469187 R3HDM1Q15032 1099 aaKnown RBP13.39□□□□□ -0.27
TRIM6-206ENST00000469187 C1orf115Q9H7X2 142 aa13.39□□□□□ -0.27
TRIM6-206ENST00000469187 RGPD3A6NKT7 1758 aaPredicted RBP13.38□□□□□ -0.27
TRIM6-206ENST00000469187 RGPD4Q7Z3J3 1758 aa13.38□□□□□ -0.27
TRIM6-206ENST00000469187 HMMRO75330 724 aa13.38□□□□□ -0.27
TRIM6-206ENST00000469187 MSL1Q68DK7 614 aa13.38□□□□□ -0.27
TRIM6-206ENST00000469187 SUCLG2Q96I99 432 aa13.38□□□□□ -0.27
TRIM6-206ENST00000469187 UBN2Q6ZU65 1347 aa13.38□□□□□ -0.27
TRIM6-206ENST00000469187 RREB1Q92766 1687 aa13.37□□□□□ -0.27
TRIM6-206ENST00000469187 IBTKQ9P2D0 1353 aaPredicted RBP13.37□□□□□ -0.27
TRIM6-206ENST00000469187 PDE8AO60658 829 aa13.37□□□□□ -0.27
TRIM6-206ENST00000469187 ST5P78524 1137 aa13.37□□□□□ -0.27
TRIM6-206ENST00000469187 NUTM1Q86Y26 1132 aa13.37□□□□□ -0.27
TRIM6-206ENST00000469187 SYNE4Q8N205 404 aa13.37□□□□□ -0.27
TRIM6-206ENST00000469187 NLRP3Q96P20 1036 aa13.37□□□□□ -0.27
TRIM6-206ENST00000469187 CHMP3Q9Y3E7 222 aa13.37□□□□□ -0.27
TRIM6-206ENST00000469187 PCDHB15Q9Y5E8 787 aa13.37□□□□□ -0.27
TRIM6-206ENST00000469187 CDHR2Q9BYE9 1310 aa13.37□□□□□ -0.27
TRIM6-206ENST00000469187 NTSR2O95665 410 aa13.36□□□□□ -0.27
TRIM6-206ENST00000469187 MMP10P09238 476 aa13.36□□□□□ -0.27
TRIM6-206ENST00000469187 HCLS1P14317 486 aaPredicted RBP13.36□□□□□ -0.27
TRIM6-206ENST00000469187 ERFEQ4G0M1 354 aa13.36□□□□□ -0.27
TRIM6-206ENST00000469187 SLC10A5Q5PT55 438 aa13.36□□□□□ -0.27
TRIM6-206ENST00000469187 ANKRD44Q8N8A2 993 aa13.36□□□□□ -0.27
TRIM6-206ENST00000469187 CNBD1Q8NA66 436 aa13.36□□□□□ -0.27
TRIM6-206ENST00000469187 CARMIL3Q8ND23 1372 aa13.35□□□□□ -0.27
TRIM6-206ENST00000469187 PSDA5PKW4 1024 aaPredicted RBP13.35□□□□□ -0.27
TRIM6-206ENST00000469187 SRGAP3O43295 1099 aa13.35□□□□□ -0.27
TRIM6-206ENST00000469187 CASP7P55210 303 aa13.35□□□□□ -0.27
TRIM6-206ENST00000469187 LMBR1LQ6UX01 489 aa13.35□□□□□ -0.27
TRIM6-206ENST00000469187 PLA2G12BQ9BX93 195 aa13.35□□□□□ -0.27
TRIM6-206ENST00000469187 BICC1Q9H694 974 aaKnown RBP13.35□□□□□ -0.27
TRIM6-206ENST00000469187 ATF5Q9Y2D1 282 aaPredicted RBP13.35□□□□□ -0.27
TRIM6-206ENST00000469187 POLRMTO00411 1230 aaKnown RBP13.34□□□□□ -0.27
TRIM6-206ENST00000469187 POLD1P28340 1107 aa13.34□□□□□ -0.27
TRIM6-206ENST00000469187 FOXO4P98177 505 aa13.34□□□□□ -0.27
TRIM6-206ENST00000469187 CCDC57Q2TAC2 916 aa13.34□□□□□ -0.27
TRIM6-206ENST00000469187 B4GALNT3Q6L9W6 998 aa13.34□□□□□ -0.27
TRIM6-206ENST00000469187 CEP85Q6P2H3 762 aa13.34□□□□□ -0.27
TRIM6-206ENST00000469187 CCDC24Q8N4L8 307 aa13.34□□□□□ -0.27
TRIM6-206ENST00000469187 PDGFDQ9GZP0 370 aaPredicted RBP13.34□□□□□ -0.27
TRIM6-206ENST00000469187 ZBTB47Q9UFB7 747 aaPredicted RBP13.34□□□□□ -0.27
TRIM6-206ENST00000469187 NUP98P52948 1817 aa13.34□□□□□ -0.27
TRIM6-206ENST00000469187 UBR3Q6ZT12 1888 aa13.33□□□□□ -0.27
TRIM6-206ENST00000469187 ZBTB7AO95365 584 aa13.33□□□□□ -0.28
TRIM6-206ENST00000469187 CCDC152Q4G0S7 254 aa13.33□□□□□ -0.28
TRIM6-206ENST00000469187 TAF7LQ5H9L4 462 aa13.33□□□□□ -0.28
TRIM6-206ENST00000469187 EPHA10Q5JZY3 1008 aa13.33□□□□□ -0.28
TRIM6-206ENST00000469187 KAZALD1Q96I82 304 aa13.33□□□□□ -0.28
TRIM6-206ENST00000469187 MTFR1LQ9H019 292 aa13.33□□□□□ -0.28
TRIM6-206ENST00000469187 ANKRD18BA2A2Z9 1011 aa13.32□□□□□ -0.28
TRIM6-206ENST00000469187 CSF1RP07333 972 aa13.32□□□□□ -0.28
TRIM6-206ENST00000469187 CTSWP56202 376 aa13.32□□□□□ -0.28
TRIM6-206ENST00000469187 DDR1Q08345 913 aa13.32□□□□□ -0.28
TRIM6-206ENST00000469187 IFIT5Q13325 482 aaKnown RBP13.32□□□□□ -0.28
TRIM6-206ENST00000469187 HDAC1Q13547 482 aaPredicted RBP13.32□□□□□ -0.28
TRIM6-206ENST00000469187 PRR5LQ6MZQ0 368 aa13.32□□□□□ -0.28
TRIM6-206ENST00000469187 TTLL11Q8NHH1 800 aa13.32□□□□□ -0.28
TRIM6-206ENST00000469187 CCDC85AQ96PX6 553 aaPredicted RBP13.32□□□□□ -0.28
TRIM6-206ENST00000469187 ARFGEF2Q9Y6D5 1785 aa13.32□□□□□ -0.28
TRIM6-206ENST00000469187 PNMA6EA0A0J9YXQ4 647 aa13.31□□□□□ -0.28
TRIM6-206ENST00000469187 SURF6O75683 361 aaKnown RBP13.31□□□□□ -0.28
TRIM6-206ENST00000469187 IGHDP01880 384 aa13.31□□□□□ -0.28
TRIM6-206ENST00000469187 PDE6BP35913 854 aa13.31□□□□□ -0.28
TRIM6-206ENST00000469187 G3BP1Q13283 466 aaKnown RBP eCLIP13.31□□□□□ -0.28
TRIM6-206ENST00000469187 MTX1Q13505 466 aa13.31□□□□□ -0.28
TRIM6-206ENST00000469187 RABL6Q3YEC7 729 aaPredicted RBP13.31□□□□□ -0.28
TRIM6-206ENST00000469187 HSP90AB4PQ58FF6 505 aa13.31□□□□□ -0.28
TRIM6-206ENST00000469187 SSH3Q8TE77 659 aa13.31□□□□□ -0.28
TRIM6-206ENST00000469187 BRIP1Q9BX63 1249 aa13.31□□□□□ -0.28
TRIM6-206ENST00000469187 SOCS7O14512 581 aa13.3□□□□□ -0.28
TRIM6-206ENST00000469187 OS9Q13438 667 aaPredicted RBP13.3□□□□□ -0.28
TRIM6-206ENST00000469187 SF3B3Q15393 1217 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms