RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 SOS1Q07889 1333 aaPredicted RBP4.61□□□□□ -1.67
TRIM59-202ENST00000468542 IL16Q14005 1332 aa4.61□□□□□ -1.67
TRIM59-202ENST00000468542 UTRNP46939 3433 aa4.61□□□□□ -1.67
TRIM59-202ENST00000468542 KIAA1551Q9HCM1 1747 aa4.6□□□□□ -1.67
TRIM59-202ENST00000468542 BTBD11A6QL63 1104 aa4.6□□□□□ -1.67
TRIM59-202ENST00000468542 CHL1O00533 1208 aa4.6□□□□□ -1.67
TRIM59-202ENST00000468542 APAF1O14727 1248 aa4.6□□□□□ -1.67
TRIM59-202ENST00000468542 HOXB7P09629 217 aa4.6□□□□□ -1.67
TRIM59-202ENST00000468542 MAP3K9P80192 1104 aa4.6□□□□□ -1.67
TRIM59-202ENST00000468542 EZH2Q15910 746 aaKnown RBP4.6□□□□□ -1.67
TRIM59-202ENST00000468542 RC3H1Q5TC82 1133 aaKnown RBP4.6□□□□□ -1.67
TRIM59-202ENST00000468542 NBPF14Q5TI25 921 aa4.6□□□□□ -1.67
TRIM59-202ENST00000468542 MCM10Q7L590 875 aa4.6□□□□□ -1.67
TRIM59-202ENST00000468542 WDR63Q8IWG1 891 aa4.6□□□□□ -1.67
TRIM59-202ENST00000468542 WWC1Q8IX03 1113 aa4.6□□□□□ -1.67
TRIM59-202ENST00000468542 TTC5Q8N0Z6 440 aa4.6□□□□□ -1.67
TRIM59-202ENST00000468542 FLAD1Q8NFF5 587 aa4.6□□□□□ -1.67
TRIM59-202ENST00000468542 WNT2BQ93097 391 aa4.6□□□□□ -1.67
TRIM59-202ENST00000468542 FMNL2Q96PY5 1086 aa4.6□□□□□ -1.67
TRIM59-202ENST00000468542 IFT57Q9NWB7 429 aa4.6□□□□□ -1.67
TRIM59-202ENST00000468542 ASAP1Q9ULH1 1129 aa4.6□□□□□ -1.67
TRIM59-202ENST00000468542 CNTNAP4Q9C0A0 1308 aa4.6□□□□□ -1.67
TRIM59-202ENST00000468542 SCN7AQ01118 1682 aa4.6□□□□□ -1.67
TRIM59-202ENST00000468542 STARD3NLO95772 234 aa4.59□□□□□ -1.67
TRIM59-202ENST00000468542 ITGBL1O95965 494 aaPredicted RBP4.59□□□□□ -1.67
TRIM59-202ENST00000468542 SNRPA1P09661 255 aaKnown RBP4.59□□□□□ -1.67
TRIM59-202ENST00000468542 ZNF853P0CG23 659 aa4.59□□□□□ -1.67
TRIM59-202ENST00000468542 SSFA2P28290 1259 aa4.59□□□□□ -1.67
TRIM59-202ENST00000468542 GNAI1P63096 354 aa4.59□□□□□ -1.67
TRIM59-202ENST00000468542 ERBB4Q15303 1308 aa4.59□□□□□ -1.67
TRIM59-202ENST00000468542 SLC15A2Q16348 729 aa4.59□□□□□ -1.67
TRIM59-202ENST00000468542 ANKRD36CQ5JPF3 1778 aa4.59□□□□□ -1.67
TRIM59-202ENST00000468542 TYW1BQ6NUM6 668 aa4.59□□□□□ -1.67
TRIM59-202ENST00000468542 N4BP2Q86UW6 1770 aaPredicted RBP4.59□□□□□ -1.67
TRIM59-202ENST00000468542 CCDC146Q8IYE0 955 aa4.59□□□□□ -1.67
TRIM59-202ENST00000468542 ZNF496Q96IT1 587 aaPredicted RBP4.59□□□□□ -1.67
TRIM59-202ENST00000468542 ZNF521Q96K83 1311 aa4.59□□□□□ -1.67
TRIM59-202ENST00000468542 EPAS1Q99814 870 aa4.59□□□□□ -1.67
TRIM59-202ENST00000468542 LRRC4BQ9NT99 713 aa4.59□□□□□ -1.67
TRIM59-202ENST00000468542 STK32BQ9NY57 414 aa4.59□□□□□ -1.67
TRIM59-202ENST00000468542 NUP98P52948 1817 aa4.58□□□□□ -1.68
TRIM59-202ENST00000468542 AFDNP55196 1824 aaKnown RBP4.58□□□□□ -1.68
TRIM59-202ENST00000468542 DLEC1Q9Y238 1755 aa4.58□□□□□ -1.68
TRIM59-202ENST00000468542 GOLGA8CPA6NN73 597 aa4.58□□□□□ -1.68
TRIM59-202ENST00000468542 PTCD1O75127 700 aaKnown RBP4.58□□□□□ -1.68
TRIM59-202ENST00000468542 GIGYF1O75420 1035 aaPredicted RBP4.58□□□□□ -1.68
TRIM59-202ENST00000468542 ATP6V1AP38606 617 aa4.58□□□□□ -1.68
TRIM59-202ENST00000468542 EIF4A1P60842 406 aaKnown RBP4.58□□□□□ -1.68
TRIM59-202ENST00000468542 DCTN1Q14203 1278 aa4.58□□□□□ -1.68
TRIM59-202ENST00000468542 PROX2Q3B8N5 592 aa4.58□□□□□ -1.68
TRIM59-202ENST00000468542 FAM9BQ8IZU0 186 aa4.58□□□□□ -1.68
TRIM59-202ENST00000468542 SLC16A10Q8TF71 515 aa4.58□□□□□ -1.68
TRIM59-202ENST00000468542 SLC4A9Q96Q91 983 aa4.58□□□□□ -1.68
TRIM59-202ENST00000468542 ARFGEF2Q9Y6D5 1785 aa4.58□□□□□ -1.68
TRIM59-202ENST00000468542 RPS6KA4O75676 772 aa4.57□□□□□ -1.68
TRIM59-202ENST00000468542 CT47B1P0C2W7 299 aaPredicted RBP4.57□□□□□ -1.68
TRIM59-202ENST00000468542 CYP19A1P11511 503 aaPredicted RBP4.57□□□□□ -1.68
TRIM59-202ENST00000468542 IL6STP40189 918 aaPredicted RBP4.57□□□□□ -1.68
TRIM59-202ENST00000468542 SLC39A6Q13433 755 aa4.57□□□□□ -1.68
TRIM59-202ENST00000468542 ITPK1Q13572 414 aa4.57□□□□□ -1.68
TRIM59-202ENST00000468542 LINC00116Q8NCU8 138 aa4.57□□□□□ -1.68
TRIM59-202ENST00000468542 ZNF428Q96B54 188 aa4.57□□□□□ -1.68
TRIM59-202ENST00000468542 AK7Q96M32 723 aa4.57□□□□□ -1.68
TRIM59-202ENST00000468542 THUMPD2Q9BTF0 503 aaKnown RBP4.57□□□□□ -1.68
TRIM59-202ENST00000468542 MYH16Q9H6N6 1097 aa4.57□□□□□ -1.68
TRIM59-202ENST00000468542 CCDC87Q9NVE4 849 aa4.57□□□□□ -1.68
TRIM59-202ENST00000468542 TFCP2L1Q9NZI6 479 aa4.57□□□□□ -1.68
TRIM59-202ENST00000468542 TSPYL4Q9UJ04 414 aa4.57□□□□□ -1.68
TRIM59-202ENST00000468542 RRP7AQ9Y3A4 280 aaKnown RBP4.57□□□□□ -1.68
TRIM59-202ENST00000468542 ARFGEF1Q9Y6D6 1849 aa4.56□□□□□ -1.68
TRIM59-202ENST00000468542 PNPLA7Q6ZV29 1317 aa4.56□□□□□ -1.68
TRIM59-202ENST00000468542 A0A087WZG4 1122 aa4.56□□□□□ -1.68
TRIM59-202ENST00000468542 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.56□□□□□ -1.68
TRIM59-202ENST00000468542 SOWAHBA6NEL2 793 aa4.56□□□□□ -1.68
TRIM59-202ENST00000468542 E9PSI1 815 aa4.56□□□□□ -1.68
TRIM59-202ENST00000468542 CRKLP46109 303 aaKnown RBP4.56□□□□□ -1.68
TRIM59-202ENST00000468542 EIF5P55010 431 aaKnown RBP4.56□□□□□ -1.68
TRIM59-202ENST00000468542 NEUROD2Q15784 382 aa4.56□□□□□ -1.68
TRIM59-202ENST00000468542 ZNF827Q17R98 1081 aa4.56□□□□□ -1.68
TRIM59-202ENST00000468542 C6orf132Q5T0Z8 1188 aa4.56□□□□□ -1.68
TRIM59-202ENST00000468542 INTS5Q6P9B9 1019 aaKnown RBP4.56□□□□□ -1.68
TRIM59-202ENST00000468542 DNAJC10Q8IXB1 793 aa4.56□□□□□ -1.68
TRIM59-202ENST00000468542 MTFR1LQ9H019 292 aa4.56□□□□□ -1.68
TRIM59-202ENST00000468542 MBIPQ9NS73 344 aa4.56□□□□□ -1.68
TRIM59-202ENST00000468542 RTCBQ9Y3I0 505 aaKnown RBP4.56□□□□□ -1.68
TRIM59-202ENST00000468542 ANKRD31Q8N7Z5 1873 aa4.56□□□□□ -1.68
TRIM59-202ENST00000468542 LAMB2P55268 1798 aa4.55□□□□□ -1.68
TRIM59-202ENST00000468542 ZBED9Q6R2W3 1325 aa4.55□□□□□ -1.68
TRIM59-202ENST00000468542 USP42Q9H9J4 1324 aaKnown RBP4.55□□□□□ -1.68
TRIM59-202ENST00000468542 FANCIQ9NVI1 1328 aa4.55□□□□□ -1.68
TRIM59-202ENST00000468542 GNPATO15228 680 aa4.55□□□□□ -1.68
TRIM59-202ENST00000468542 KCNQ3O43525 872 aa4.55□□□□□ -1.68
TRIM59-202ENST00000468542 R3HDM1Q15032 1099 aaKnown RBP4.55□□□□□ -1.68
TRIM59-202ENST00000468542 TRAPPC3LQ5T215 181 aa4.55□□□□□ -1.68
TRIM59-202ENST00000468542 CLEC4GQ6UXB4 293 aa4.55□□□□□ -1.68
TRIM59-202ENST00000468542 NPM2Q86SE8 214 aaKnown RBP4.55□□□□□ -1.68
TRIM59-202ENST00000468542 TRMT2AQ8IZ69 625 aaKnown RBP4.55□□□□□ -1.68
TRIM59-202ENST00000468542 NLGN1Q8N2Q7 840 aa4.55□□□□□ -1.68
TRIM59-202ENST00000468542 ANKK1Q8NFD2 765 aa4.55□□□□□ -1.68
TRIM59-202ENST00000468542 KIAA1468Q9P260 1216 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms