RNA–Protein interactions for RNA: ENST00000468528.5

NXF3-204, Transcript of nuclear RNA export factor 3, humanhuman

TSL 5

Gene NXF3, Length 535 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-204ENST00000468528 NIP7Q9Y221 180 aaKnown RBP eCLIP9□□□□□ -0.97
NXF3-204ENST00000468528 QSER1Q2KHR3 1735 aa9□□□□□ -0.97
NXF3-204ENST00000468528 NUP188Q5SRE5 1749 aa9□□□□□ -0.97
NXF3-204ENST00000468528 CARMIL3Q8ND23 1372 aa8.99□□□□□ -0.97
NXF3-204ENST00000468528 GNAI2P04899 355 aa8.99□□□□□ -0.97
NXF3-204ENST00000468528 PCCAP05165 728 aaPredicted RBP8.99□□□□□ -0.97
NXF3-204ENST00000468528 UBTFL1P0CB47 393 aaPredicted RBP8.99□□□□□ -0.97
NXF3-204ENST00000468528 TPTE2Q6XPS3 522 aa8.99□□□□□ -0.97
NXF3-204ENST00000468528 AMIGO3Q86WK7 504 aa8.99□□□□□ -0.97
NXF3-204ENST00000468528 UTP14AQ9BVJ6 771 aaKnown RBP8.99□□□□□ -0.97
NXF3-204ENST00000468528 USP44Q9H0E7 712 aa8.99□□□□□ -0.97
NXF3-204ENST00000468528 BCL2L12Q9HB09 334 aa8.99□□□□□ -0.97
NXF3-204ENST00000468528 ZBTB40Q9NUA8 1239 aa8.99□□□□□ -0.97
NXF3-204ENST00000468528 SCN7AQ01118 1682 aa8.99□□□□□ -0.97
NXF3-204ENST00000468528 CDHR2Q9BYE9 1310 aa8.99□□□□□ -0.97
NXF3-204ENST00000468528 ARFGEF2Q9Y6D5 1785 aa8.99□□□□□ -0.97
NXF3-204ENST00000468528 ATP5J2-PTCD1G3V325 749 aa8.98□□□□□ -0.97
NXF3-204ENST00000468528 H7C1W4 665 aa8.98□□□□□ -0.97
NXF3-204ENST00000468528 TM4SF1P30408 202 aa8.98□□□□□ -0.97
NXF3-204ENST00000468528 CWF19L2Q2TBE0 894 aaKnown RBP8.98□□□□□ -0.97
NXF3-204ENST00000468528 CRBNQ96SW2 442 aa8.98□□□□□ -0.97
NXF3-204ENST00000468528 SRP68Q9UHB9 627 aaKnown RBP8.98□□□□□ -0.97
NXF3-204ENST00000468528 TRMT112Q9UI30 125 aaKnown RBP8.98□□□□□ -0.97
NXF3-204ENST00000468528 TNNQ9UQP3 1299 aa8.98□□□□□ -0.97
NXF3-204ENST00000468528 BCORQ6W2J9 1755 aa8.98□□□□□ -0.97
NXF3-204ENST00000468528 N4BP2Q86UW6 1770 aaPredicted RBP8.98□□□□□ -0.97
NXF3-204ENST00000468528 SH3TC1Q8TE82 1336 aa8.98□□□□□ -0.97
NXF3-204ENST00000468528 GPTP24298 496 aa8.97□□□□□ -0.97
NXF3-204ENST00000468528 GTF2E1P29083 439 aaPredicted RBP8.97□□□□□ -0.97
NXF3-204ENST00000468528 NFIXQ14938 502 aa8.97□□□□□ -0.97
NXF3-204ENST00000468528 TBC1D9BQ66K14 1250 aa8.97□□□□□ -0.97
NXF3-204ENST00000468528 NBPF5PQ86XG9 351 aaPredicted RBP8.97□□□□□ -0.97
NXF3-204ENST00000468528 RPAP2Q8IXW5 612 aaPredicted RBP8.97□□□□□ -0.97
NXF3-204ENST00000468528 MEIS3Q99687 375 aa8.97□□□□□ -0.97
NXF3-204ENST00000468528 PLA2G12BQ9BX93 195 aa8.97□□□□□ -0.97
NXF3-204ENST00000468528 C4AP0C0L4 1744 aa8.97□□□□□ -0.97
NXF3-204ENST00000468528 NPHP1O15259 732 aa8.96□□□□□ -0.98
NXF3-204ENST00000468528 HMMRO75330 724 aa8.96□□□□□ -0.98
NXF3-204ENST00000468528 NTSR2O95665 410 aa8.96□□□□□ -0.98
NXF3-204ENST00000468528 NBPF7P0C2Y1 421 aaPredicted RBP8.96□□□□□ -0.98
NXF3-204ENST00000468528 PRKCSHP14314 528 aaPredicted RBP8.96□□□□□ -0.98
NXF3-204ENST00000468528 SLC10A5Q5PT55 438 aa8.96□□□□□ -0.98
NXF3-204ENST00000468528 UBE3BQ7Z3V4 1068 aa8.96□□□□□ -0.98
NXF3-204ENST00000468528 CNBD1Q8NA66 436 aa8.96□□□□□ -0.98
NXF3-204ENST00000468528 EXOC6Q8TAG9 804 aa8.96□□□□□ -0.98
NXF3-204ENST00000468528 MTFR1LQ9H019 292 aa8.96□□□□□ -0.98
NXF3-204ENST00000468528 PDZRN3Q9UPQ7 1066 aa8.96□□□□□ -0.98
NXF3-204ENST00000468528 PARP3Q9Y6F1 533 aa8.96□□□□□ -0.98
NXF3-204ENST00000468528 UBN2Q6ZU65 1347 aa8.96□□□□□ -0.98
NXF3-204ENST00000468528 RIC1Q4ADV7 1423 aa8.96□□□□□ -0.98
NXF3-204ENST00000468528 ANKRD36CQ5JPF3 1778 aa8.95□□□□□ -0.98
NXF3-204ENST00000468528 SOCS7O14512 581 aa8.95□□□□□ -0.98
NXF3-204ENST00000468528 IRS4O14654 1257 aaPredicted RBP8.95□□□□□ -0.98
NXF3-204ENST00000468528 CASP7P55210 303 aa8.95□□□□□ -0.98
NXF3-204ENST00000468528 ST5P78524 1137 aa8.95□□□□□ -0.98
NXF3-204ENST00000468528 MTX1Q13505 466 aa8.95□□□□□ -0.98
NXF3-204ENST00000468528 SUSD4Q5VX71 490 aa8.95□□□□□ -0.98
NXF3-204ENST00000468528 NUP98P52948 1817 aa8.95□□□□□ -0.98
NXF3-204ENST00000468528 POLRMTO00411 1230 aaKnown RBP8.94□□□□□ -0.98
NXF3-204ENST00000468528 PDE8AO60658 829 aa8.94□□□□□ -0.98
NXF3-204ENST00000468528 SERPINB2P05120 415 aa8.94□□□□□ -0.98
NXF3-204ENST00000468528 MMP10P09238 476 aa8.94□□□□□ -0.98
NXF3-204ENST00000468528 POLD1P28340 1107 aa8.94□□□□□ -0.98
NXF3-204ENST00000468528 IRX6P78412 446 aaPredicted RBP8.94□□□□□ -0.98
NXF3-204ENST00000468528 R3HDM1Q15032 1099 aaKnown RBP8.94□□□□□ -0.98
NXF3-204ENST00000468528 RABL6Q3YEC7 729 aaPredicted RBP8.94□□□□□ -0.98
NXF3-204ENST00000468528 BICDL1Q6ZP65 573 aa8.94□□□□□ -0.98
NXF3-204ENST00000468528 SMIM5Q71RC9 77 aa8.94□□□□□ -0.98
NXF3-204ENST00000468528 FAM89AQ96GI7 184 aa8.94□□□□□ -0.98
NXF3-204ENST00000468528 PPP4R2Q9NY27 417 aa8.94□□□□□ -0.98
NXF3-204ENST00000468528 LRRFIP2Q9Y608 721 aaKnown RBP8.94□□□□□ -0.98
NXF3-204ENST00000468528 CSF1RP07333 972 aa8.93□□□□□ -0.98
NXF3-204ENST00000468528 ATP8B2P98198 1209 aa8.93□□□□□ -0.98
NXF3-204ENST00000468528 HDAC1Q13547 482 aaPredicted RBP8.93□□□□□ -0.98
NXF3-204ENST00000468528 CCDC152Q4G0S7 254 aa8.93□□□□□ -0.98
NXF3-204ENST00000468528 ANKRD44Q8N8A2 993 aa8.93□□□□□ -0.98
NXF3-204ENST00000468528 NLRP3Q96P20 1036 aa8.93□□□□□ -0.98
NXF3-204ENST00000468528 BRIP1Q9BX63 1249 aa8.93□□□□□ -0.98
NXF3-204ENST00000468528 RWDD1Q9H446 243 aaPredicted RBP8.93□□□□□ -0.98
NXF3-204ENST00000468528 FBXO3Q9UK99 471 aa8.93□□□□□ -0.98
NXF3-204ENST00000468528 TAOK2Q9UL54 1235 aa8.93□□□□□ -0.98
NXF3-204ENST00000468528 RTL9Q8NET4 1388 aa8.93□□□□□ -0.98
NXF3-204ENST00000468528 COL24A1Q17RW2 1714 aa8.93□□□□□ -0.98
NXF3-204ENST00000468528 TUBGCP6Q96RT7 1819 aa8.92□□□□□ -0.98
NXF3-204ENST00000468528 KLRG2A4D1S0 409 aaPredicted RBP8.92□□□□□ -0.98
NXF3-204ENST00000468528 PDE6BP35913 854 aa8.92□□□□□ -0.98
NXF3-204ENST00000468528 CTSWP56202 376 aa8.92□□□□□ -0.98
NXF3-204ENST00000468528 DDR1Q08345 913 aa8.92□□□□□ -0.98
NXF3-204ENST00000468528 SF3B3Q15393 1217 aaKnown RBP8.92□□□□□ -0.98
NXF3-204ENST00000468528 ERFEQ4G0M1 354 aa8.92□□□□□ -0.98
NXF3-204ENST00000468528 HSP90AB4PQ58FF6 505 aa8.92□□□□□ -0.98
NXF3-204ENST00000468528 PRR5LQ6MZQ0 368 aa8.92□□□□□ -0.98
NXF3-204ENST00000468528 CEP85Q6P2H3 762 aa8.92□□□□□ -0.98
NXF3-204ENST00000468528 SSH3Q8TE77 659 aa8.92□□□□□ -0.98
NXF3-204ENST00000468528 SUCLG2Q96I99 432 aa8.92□□□□□ -0.98
NXF3-204ENST00000468528 BICC1Q9H694 974 aaKnown RBP8.92□□□□□ -0.98
NXF3-204ENST00000468528 AFDNP55196 1824 aaKnown RBP8.91□□□□□ -0.98
NXF3-204ENST00000468528 FAM177BA6PVY3 158 aa8.91□□□□□ -0.98
NXF3-204ENST00000468528 SRGAP3O43295 1099 aa8.91□□□□□ -0.98
NXF3-204ENST00000468528 FOXO4P98177 505 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms