RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 C4BP0C0L5 1744 aa10.3□□□□□ -0.76
BRCA1-208ENST00000468300 BICC1Q9H694 974 aaKnown RBP10.3□□□□□ -0.76
BRCA1-208ENST00000468300 RBM19Q9Y4C8 960 aaKnown RBP10.3□□□□□ -0.76
BRCA1-208ENST00000468300 SALL3Q9BXA9 1300 aa10.3□□□□□ -0.76
BRCA1-208ENST00000468300 A0A0G2JS52 829 aa10.3□□□□□ -0.76
BRCA1-208ENST00000468300 AMIGO3Q86WK7 504 aa10.3□□□□□ -0.76
BRCA1-208ENST00000468300 SMARCC1Q92922 1105 aaPredicted RBP10.3□□□□□ -0.76
BRCA1-208ENST00000468300 CASZ1Q86V15 1759 aa10.3□□□□□ -0.76
BRCA1-208ENST00000468300 SMARCA5O60264 1052 aaPredicted RBP10.29□□□□□ -0.76
BRCA1-208ENST00000468300 TCIRG1Q13488 830 aa10.29□□□□□ -0.76
BRCA1-208ENST00000468300 OTUD7AQ8TE49 926 aaPredicted RBP10.29□□□□□ -0.76
BRCA1-208ENST00000468300 ZMYND15Q9H091 742 aa10.29□□□□□ -0.76
BRCA1-208ENST00000468300 CCDC87Q9NVE4 849 aa10.29□□□□□ -0.76
BRCA1-208ENST00000468300 FOXO4P98177 505 aa10.29□□□□□ -0.76
BRCA1-208ENST00000468300 RABL6Q3YEC7 729 aaPredicted RBP10.29□□□□□ -0.76
BRCA1-208ENST00000468300 C9orf78Q9NZ63 289 aaPredicted RBP10.29□□□□□ -0.76
BRCA1-208ENST00000468300 EXOC6BQ9Y2D4 811 aa10.29□□□□□ -0.76
BRCA1-208ENST00000468300 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.29□□□□□ -0.76
BRCA1-208ENST00000468300 NEXNQ0ZGT2 675 aa10.29□□□□□ -0.76
BRCA1-208ENST00000468300 TRIM28Q13263 835 aaKnown RBP10.29□□□□□ -0.76
BRCA1-208ENST00000468300 GIGYF2Q6Y7W6 1299 aaKnown RBP10.29□□□□□ -0.76
BRCA1-208ENST00000468300 DDX60Q8IY21 1712 aaKnown RBP10.28□□□□□ -0.76
BRCA1-208ENST00000468300 RFX5P48382 616 aaPredicted RBP10.28□□□□□ -0.76
BRCA1-208ENST00000468300 PLEKHM2Q8IWE5 1019 aa10.28□□□□□ -0.76
BRCA1-208ENST00000468300 NOP58Q9Y2X3 529 aaKnown RBP10.28□□□□□ -0.76
BRCA1-208ENST00000468300 TNS1Q9HBL0 1735 aaKnown RBP10.28□□□□□ -0.76
BRCA1-208ENST00000468300 ZNF772Q68DY9 489 aaPredicted RBP10.28□□□□□ -0.76
BRCA1-208ENST00000468300 FBXO41Q8TF61 875 aa10.28□□□□□ -0.76
BRCA1-208ENST00000468300 BCCIPQ9P287 314 aaKnown RBP eCLIP10.28□□□□□ -0.76
BRCA1-208ENST00000468300 UBR3Q6ZT12 1888 aa10.28□□□□□ -0.76
BRCA1-208ENST00000468300 UBN2Q6ZU65 1347 aa10.28□□□□□ -0.76
BRCA1-208ENST00000468300 SRGAP3O43295 1099 aa10.27□□□□□ -0.76
BRCA1-208ENST00000468300 CAMTA2O94983 1202 aa10.27□□□□□ -0.76
BRCA1-208ENST00000468300 RBM6P78332 1123 aaKnown RBP10.27□□□□□ -0.76
BRCA1-208ENST00000468300 SMIM5Q71RC9 77 aa10.27□□□□□ -0.76
BRCA1-208ENST00000468300 UBE3BQ7Z3V4 1068 aa10.27□□□□□ -0.76
BRCA1-208ENST00000468300 CCDC191Q8NCU4 936 aa10.27□□□□□ -0.76
BRCA1-208ENST00000468300 LRRC4BQ9NT99 713 aa10.27□□□□□ -0.76
BRCA1-208ENST00000468300 CNTNAP4Q9C0A0 1308 aa10.27□□□□□ -0.77
BRCA1-208ENST00000468300 LAMB2P55268 1798 aa10.27□□□□□ -0.77
BRCA1-208ENST00000468300 A0A087WZG4 1122 aa10.27□□□□□ -0.77
BRCA1-208ENST00000468300 ERVV-1B6SEH8 477 aa10.27□□□□□ -0.77
BRCA1-208ENST00000468300 HMMRO75330 724 aa10.27□□□□□ -0.77
BRCA1-208ENST00000468300 KRT27Q7Z3Y8 459 aa10.27□□□□□ -0.77
BRCA1-208ENST00000468300 TBC1D2BQ9UPU7 963 aa10.27□□□□□ -0.77
BRCA1-208ENST00000468300 MYH3P11055 1940 aa10.27□□□□□ -0.77
BRCA1-208ENST00000468300 ZNF34Q8IZ26 560 aa10.27□□□□□ -0.77
BRCA1-208ENST00000468300 CWC25Q9NXE8 425 aaPredicted RBP10.27□□□□□ -0.77
BRCA1-208ENST00000468300 COL24A1Q17RW2 1714 aa10.26□□□□□ -0.77
BRCA1-208ENST00000468300 DZIP3Q86Y13 1208 aaKnown RBP10.26□□□□□ -0.77
BRCA1-208ENST00000468300 SYNE4Q8N205 404 aa10.26□□□□□ -0.77
BRCA1-208ENST00000468300 SEC24BO95487 1268 aa10.26□□□□□ -0.77
BRCA1-208ENST00000468300 GSPT1P15170 499 aaKnown RBP10.26□□□□□ -0.77
BRCA1-208ENST00000468300 FAM161AQ3B820 660 aa10.26□□□□□ -0.77
BRCA1-208ENST00000468300 NLRP10Q86W26 655 aa10.26□□□□□ -0.77
BRCA1-208ENST00000468300 PA2G4Q9UQ80 394 aaKnown RBP10.26□□□□□ -0.77
BRCA1-208ENST00000468300 ZNF330Q9Y3S2 320 aaPredicted RBP10.26□□□□□ -0.77
BRCA1-208ENST00000468300 POTEAQ6S8J7 498 aa10.25□□□□□ -0.77
BRCA1-208ENST00000468300 KIF6Q6ZMV9 814 aa10.25□□□□□ -0.77
BRCA1-208ENST00000468300 BRPF3Q9ULD4 1205 aa10.25□□□□□ -0.77
BRCA1-208ENST00000468300 COL4A1P02462 1669 aa10.25□□□□□ -0.77
BRCA1-208ENST00000468300 APBB1O00213 710 aa10.25□□□□□ -0.77
BRCA1-208ENST00000468300 RC3H1Q5TC82 1133 aaKnown RBP10.25□□□□□ -0.77
BRCA1-208ENST00000468300 FAM196AQ6ZSG2 479 aa10.25□□□□□ -0.77
BRCA1-208ENST00000468300 PROM2Q8N271 834 aa10.25□□□□□ -0.77
BRCA1-208ENST00000468300 KLHDC4Q8TBB5 520 aa10.25□□□□□ -0.77
BRCA1-208ENST00000468300 BCL2L12Q9HB09 334 aa10.24□□□□□ -0.77
BRCA1-208ENST00000468300 SASH1O94885 1247 aa10.24□□□□□ -0.77
BRCA1-208ENST00000468300 PTPN12Q05209 780 aaKnown RBP10.24□□□□□ -0.77
BRCA1-208ENST00000468300 LRRCC1Q9C099 1032 aa10.24□□□□□ -0.77
BRCA1-208ENST00000468300 OSBPL3Q9H4L5 887 aa10.24□□□□□ -0.77
BRCA1-208ENST00000468300 RGPD3A6NKT7 1758 aaPredicted RBP10.24□□□□□ -0.77
BRCA1-208ENST00000468300 RGPD4Q7Z3J3 1758 aa10.24□□□□□ -0.77
BRCA1-208ENST00000468300 PCCAP05165 728 aaPredicted RBP10.24□□□□□ -0.77
BRCA1-208ENST00000468300 ZBTB38Q8NAP3 1195 aaPredicted RBP10.24□□□□□ -0.77
BRCA1-208ENST00000468300 PLA2G12BQ9BX93 195 aa10.24□□□□□ -0.77
BRCA1-208ENST00000468300 CCNL1Q9UK58 526 aaPredicted RBP10.24□□□□□ -0.77
BRCA1-208ENST00000468300 SURF6O75683 361 aaKnown RBP10.23□□□□□ -0.77
BRCA1-208ENST00000468300 TRIM37O94972 964 aa10.23□□□□□ -0.77
BRCA1-208ENST00000468300 RTL5Q5HYW3 569 aaPredicted RBP10.23□□□□□ -0.77
BRCA1-208ENST00000468300 RHPN1Q8TCX5 695 aa10.23□□□□□ -0.77
BRCA1-208ENST00000468300 FAM89AQ96GI7 184 aa10.23□□□□□ -0.77
BRCA1-208ENST00000468300 RAB11FIP3O75154 756 aa10.23□□□□□ -0.77
BRCA1-208ENST00000468300 BMP2KLQ5H9B9 411 aa10.23□□□□□ -0.77
BRCA1-208ENST00000468300 CDHR2Q9BYE9 1310 aa10.23□□□□□ -0.77
BRCA1-208ENST00000468300 LRP5O75197 1615 aa10.23□□□□□ -0.77
BRCA1-208ENST00000468300 CSF1RP07333 972 aa10.22□□□□□ -0.77
BRCA1-208ENST00000468300 GPTP24298 496 aa10.22□□□□□ -0.77
BRCA1-208ENST00000468300 SUSD4Q5VX71 490 aa10.22□□□□□ -0.77
BRCA1-208ENST00000468300 ARID3AQ99856 593 aa10.22□□□□□ -0.77
BRCA1-208ENST00000468300 COPRSQ9NQ92 184 aa10.22□□□□□ -0.77
BRCA1-208ENST00000468300 RPS6KA4O75676 772 aa10.22□□□□□ -0.77
BRCA1-208ENST00000468300 TTC22Q5TAA0 569 aa10.22□□□□□ -0.77
BRCA1-208ENST00000468300 LMBR1LQ6UX01 489 aa10.22□□□□□ -0.77
BRCA1-208ENST00000468300 PRDM10Q9NQV6 1147 aa10.22□□□□□ -0.77
BRCA1-208ENST00000468300 STAP2Q9UGK3 403 aa10.22□□□□□ -0.77
BRCA1-208ENST00000468300 RXRBP28702 533 aa10.22□□□□□ -0.77
BRCA1-208ENST00000468300 PDE1AP54750 535 aa10.22□□□□□ -0.77
BRCA1-208ENST00000468300 IL1RAPL2Q9NP60 686 aa10.22□□□□□ -0.77
BRCA1-208ENST00000468300 HDAC5Q9UQL6 1122 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms