RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 IL1RAPL2Q9NP60 686 aa25.45■■□□□ 1.66
TMEM53-207ENST00000468117 HSP90AB4PQ58FF6 505 aa25.44■■□□□ 1.66
TMEM53-207ENST00000468117 RHPN1Q8TCX5 695 aa25.44■■□□□ 1.66
TMEM53-207ENST00000468117 OS9Q13438 667 aaPredicted RBP25.44■■□□□ 1.66
TMEM53-207ENST00000468117 BMP2KLQ5H9B9 411 aa25.44■■□□□ 1.66
TMEM53-207ENST00000468117 CNTNAP4Q9C0A0 1308 aa25.43■■□□□ 1.66
TMEM53-207ENST00000468117 FOXO4P98177 505 aa25.43■■□□□ 1.66
TMEM53-207ENST00000468117 NLRP10Q86W26 655 aa25.43■■□□□ 1.66
TMEM53-207ENST00000468117 KLHDC4Q8TBB5 520 aa25.43■■□□□ 1.66
TMEM53-207ENST00000468117 KIF1BPQ96EK5 621 aa25.43■■□□□ 1.66
TMEM53-207ENST00000468117 LMBR1LQ6UX01 489 aa25.42■■□□□ 1.66
TMEM53-207ENST00000468117 FAM89AQ96GI7 184 aa25.42■■□□□ 1.66
TMEM53-207ENST00000468117 CAMTA2O94983 1202 aa25.41■■□□□ 1.66
TMEM53-207ENST00000468117 BCORQ6W2J9 1755 aa25.41■■□□□ 1.66
TMEM53-207ENST00000468117 PCCAP05165 728 aaPredicted RBP25.41■■□□□ 1.66
TMEM53-207ENST00000468117 ZBTB38Q8NAP3 1195 aaPredicted RBP25.41■■□□□ 1.66
TMEM53-207ENST00000468117 FBXO41Q8TF61 875 aa25.41■■□□□ 1.66
TMEM53-207ENST00000468117 SIL1Q9H173 461 aa25.41■■□□□ 1.66
TMEM53-207ENST00000468117 TRIM37O94972 964 aa25.4■■□□□ 1.66
TMEM53-207ENST00000468117 GSPT1P15170 499 aaKnown RBP25.4■■□□□ 1.66
TMEM53-207ENST00000468117 UBN2Q6ZU65 1347 aa25.4■■□□□ 1.66
TMEM53-207ENST00000468117 SALL3Q9BXA9 1300 aa25.4■■□□□ 1.66
TMEM53-207ENST00000468117 SEC24BO95487 1268 aa25.39■■□□□ 1.66
TMEM53-207ENST00000468117 RFX5P48382 616 aaPredicted RBP25.39■■□□□ 1.66
TMEM53-207ENST00000468117 PDE1AP54750 535 aa25.39■■□□□ 1.66
TMEM53-207ENST00000468117 TTC22Q5TAA0 569 aa25.39■■□□□ 1.66
TMEM53-207ENST00000468117 ZNF34Q8IZ26 560 aa25.39■■□□□ 1.66
TMEM53-207ENST00000468117 CHMP3Q9Y3E7 222 aa25.39■■□□□ 1.66
TMEM53-207ENST00000468117 RC3H1Q5TC82 1133 aaKnown RBP25.39■■□□□ 1.65
TMEM53-207ENST00000468117 SMIM5Q71RC9 77 aa25.39■■□□□ 1.65
TMEM53-207ENST00000468117 SYNE4Q8N205 404 aa25.39■■□□□ 1.65
TMEM53-207ENST00000468117 RXRBP28702 533 aa25.38■■□□□ 1.65
TMEM53-207ENST00000468117 G3BP1Q13283 466 aaKnown RBP eCLIP25.38■■□□□ 1.65
TMEM53-207ENST00000468117 MYH3P11055 1940 aa25.38■■□□□ 1.65
TMEM53-207ENST00000468117 PTPN12Q05209 780 aaKnown RBP25.37■■□□□ 1.65
TMEM53-207ENST00000468117 TSHZ3Q63HK5 1081 aa25.37■■□□□ 1.65
TMEM53-207ENST00000468117 C4BP0C0L5 1744 aa25.37■■□□□ 1.65
TMEM53-207ENST00000468117 MX1P20591 662 aa25.37■■□□□ 1.65
TMEM53-207ENST00000468117 NUTM1Q86Y26 1132 aa25.37■■□□□ 1.65
TMEM53-207ENST00000468117 ERC1Q8IUD2 1116 aa25.37■■□□□ 1.65
TMEM53-207ENST00000468117 OSBPL3Q9H4L5 887 aa25.37■■□□□ 1.65
TMEM53-207ENST00000468117 COPRSQ9NQ92 184 aa25.37■■□□□ 1.65
TMEM53-207ENST00000468117 TRMT112Q9UI30 125 aaKnown RBP25.37■■□□□ 1.65
TMEM53-207ENST00000468117 GNPATO15228 680 aa25.36■■□□□ 1.65
TMEM53-207ENST00000468117 SASH1O94885 1247 aa25.36■■□□□ 1.65
TMEM53-207ENST00000468117 RGS17Q9UGC6 210 aaPredicted RBP25.36■■□□□ 1.65
TMEM53-207ENST00000468117 TUBGCP6Q96RT7 1819 aa25.35■■□□□ 1.65
TMEM53-207ENST00000468117 RPS6KA4O75676 772 aa25.35■■□□□ 1.65
TMEM53-207ENST00000468117 LRRC4BQ9NT99 713 aa25.35■■□□□ 1.65
TMEM53-207ENST00000468117 CDHR2Q9BYE9 1310 aa25.34■■□□□ 1.65
TMEM53-207ENST00000468117 PLA2G12BQ9BX93 195 aa25.34■■□□□ 1.65
TMEM53-207ENST00000468117 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.34■■□□□ 1.65
TMEM53-207ENST00000468117 CLASRPQ8N2M8 674 aaKnown RBP25.33■■□□□ 1.65
TMEM53-207ENST00000468117 SCN7AQ01118 1682 aa25.33■■□□□ 1.65
TMEM53-207ENST00000468117 SUSD4Q5VX71 490 aa25.32■■□□□ 1.64
TMEM53-207ENST00000468117 AMIGO3Q86WK7 504 aa25.32■■□□□ 1.64
TMEM53-207ENST00000468117 NIP7Q9Y221 180 aaKnown RBP eCLIP25.32■■□□□ 1.64
TMEM53-207ENST00000468117 ZNF652Q9Y2D9 606 aa25.32■■□□□ 1.64
TMEM53-207ENST00000468117 FAM177BA6PVY3 158 aa25.32■■□□□ 1.64
TMEM53-207ENST00000468117 STAP2Q9UGK3 403 aa25.32■■□□□ 1.64
TMEM53-207ENST00000468117 RTCBQ9Y3I0 505 aaKnown RBP25.32■■□□□ 1.64
TMEM53-207ENST00000468117 IRS4O14654 1257 aaPredicted RBP25.31■■□□□ 1.64
TMEM53-207ENST00000468117 CCDC85AQ96PX6 553 aaPredicted RBP25.31■■□□□ 1.64
TMEM53-207ENST00000468117 SDSP20132 328 aa25.3■■□□□ 1.64
TMEM53-207ENST00000468117 CLEC4GQ6UXB4 293 aa25.3■■□□□ 1.64
TMEM53-207ENST00000468117 C4AP0C0L4 1744 aa25.29■■□□□ 1.64
TMEM53-207ENST00000468117 PARP10Q53GL7 1025 aa25.29■■□□□ 1.64
TMEM53-207ENST00000468117 POTEAQ6S8J7 498 aa25.29■■□□□ 1.64
TMEM53-207ENST00000468117 CSF1RP07333 972 aa25.29■■□□□ 1.64
TMEM53-207ENST00000468117 ZNF594Q96JF6 807 aaPredicted RBP25.29■■□□□ 1.64
TMEM53-207ENST00000468117 UTP14AQ9BVJ6 771 aaKnown RBP25.29■■□□□ 1.64
TMEM53-207ENST00000468117 AACSQ86V21 672 aa25.28■■□□□ 1.64
TMEM53-207ENST00000468117 AK7Q96M32 723 aa25.28■■□□□ 1.64
TMEM53-207ENST00000468117 SRP68Q9UHB9 627 aaKnown RBP25.28■■□□□ 1.64
TMEM53-207ENST00000468117 NARFQ9UHQ1 456 aa25.28■■□□□ 1.64
TMEM53-207ENST00000468117 ANP32AP39687 249 aaKnown RBP25.27■■□□□ 1.64
TMEM53-207ENST00000468117 CCDC57Q2TAC2 916 aa25.27■■□□□ 1.64
TMEM53-207ENST00000468117 USPL1Q5W0Q7 1092 aa25.27■■□□□ 1.64
TMEM53-207ENST00000468117 TBC1D9Q6ZT07 1266 aa25.27■■□□□ 1.64
TMEM53-207ENST00000468117 EAF2Q96CJ1 260 aaPredicted RBP25.27■■□□□ 1.64
TMEM53-207ENST00000468117 SH3TC1Q8TE82 1336 aa25.27■■□□□ 1.64
TMEM53-207ENST00000468117 DDX60Q8IY21 1712 aaKnown RBP25.27■■□□□ 1.64
TMEM53-207ENST00000468117 UBR3Q6ZT12 1888 aa25.27■■□□□ 1.64
TMEM53-207ENST00000468117 TTLL11Q8NHH1 800 aa25.27■■□□□ 1.64
TMEM53-207ENST00000468117 ARHGEF1Q92888 912 aaKnown RBP25.27■■□□□ 1.64
TMEM53-207ENST00000468117 BCL2L12Q9HB09 334 aa25.27■■□□□ 1.64
TMEM53-207ENST00000468117 AOX1Q06278 1338 aa25.26■■□□□ 1.64
TMEM53-207ENST00000468117 AK9Q5TCS8 1911 aa25.26■■□□□ 1.63
TMEM53-207ENST00000468117 CDC45O75419 566 aa25.26■■□□□ 1.63
TMEM53-207ENST00000468117 IFIT2P09913 472 aaKnown RBP25.26■■□□□ 1.63
TMEM53-207ENST00000468117 CTSWP56202 376 aa25.26■■□□□ 1.63
TMEM53-207ENST00000468117 SLC27A3Q5K4L6 730 aa25.26■■□□□ 1.63
TMEM53-207ENST00000468117 PDE8AO60658 829 aa25.25■■□□□ 1.63
TMEM53-207ENST00000468117 ZPR1O75312 459 aa25.25■■□□□ 1.63
TMEM53-207ENST00000468117 PHF14O94880 888 aa25.25■■□□□ 1.63
TMEM53-207ENST00000468117 NTSR2O95665 410 aa25.25■■□□□ 1.63
TMEM53-207ENST00000468117 TFCP2Q12800 502 aa25.25■■□□□ 1.63
TMEM53-207ENST00000468117 MFAP1P55081 439 aaKnown RBP25.25■■□□□ 1.63
TMEM53-207ENST00000468117 ATG9AQ7Z3C6 839 aa25.25■■□□□ 1.63
TMEM53-207ENST00000468117 PI4K2BQ8TCG2 481 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms