RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 ZNF157P51786 506 aaPredicted RBP16.22■□□□□ 0.19
VPS26A-204ENST00000467852 REM2Q8IYK8 340 aaPredicted RBP16.22■□□□□ 0.19
VPS26A-204ENST00000467852 ZC3H15Q8WU90 426 aaKnown RBP16.22■□□□□ 0.19
VPS26A-204ENST00000467852 ALDH1B1P30837 517 aa16.21■□□□□ 0.19
VPS26A-204ENST00000467852 LARGE2Q8N3Y3 721 aa16.21■□□□□ 0.19
VPS26A-204ENST00000467852 CSRNP1Q96S65 589 aa16.21■□□□□ 0.19
VPS26A-204ENST00000467852 PITPNM2Q9BZ72 1349 aa16.2■□□□□ 0.18
VPS26A-204ENST00000467852 SLC24A1O60721 1099 aa16.2■□□□□ 0.18
VPS26A-204ENST00000467852 EIF4A2Q14240 407 aaKnown RBP16.2■□□□□ 0.18
VPS26A-204ENST00000467852 NPM2Q86SE8 214 aaKnown RBP16.2■□□□□ 0.18
VPS26A-204ENST00000467852 VSIG10Q8N0Z9 540 aa16.2■□□□□ 0.18
VPS26A-204ENST00000467852 C2orf69Q8N8R5 385 aa16.2■□□□□ 0.18
VPS26A-204ENST00000467852 TBC1D2BQ9UPU7 963 aa16.2■□□□□ 0.18
VPS26A-204ENST00000467852 SCN7AQ01118 1682 aa16.19■□□□□ 0.18
VPS26A-204ENST00000467852 STARD3NLO95772 234 aa16.19■□□□□ 0.18
VPS26A-204ENST00000467852 MNX1P50219 401 aaPredicted RBP16.19■□□□□ 0.18
VPS26A-204ENST00000467852 ZNF330Q9Y3S2 320 aaPredicted RBP16.19■□□□□ 0.18
VPS26A-204ENST00000467852 SLC39A6Q13433 755 aa16.18■□□□□ 0.18
VPS26A-204ENST00000467852 NBPF5PQ86XG9 351 aaPredicted RBP16.18■□□□□ 0.18
VPS26A-204ENST00000467852 ZNF296Q8WUU4 475 aaPredicted RBP16.18■□□□□ 0.18
VPS26A-204ENST00000467852 KIAA0100Q14667 2235 aaKnown RBP16.17■□□□□ 0.18
VPS26A-204ENST00000467852 CEP290O15078 2479 aa16.17■□□□□ 0.18
VPS26A-204ENST00000467852 KLRG2A4D1S0 409 aaPredicted RBP16.17■□□□□ 0.18
VPS26A-204ENST00000467852 POLA2Q14181 598 aa16.17■□□□□ 0.18
VPS26A-204ENST00000467852 INTS3Q68E01 1043 aaKnown RBP16.17■□□□□ 0.18
VPS26A-204ENST00000467852 CC2D2BQ6DHV5 1058 aa16.17■□□□□ 0.18
VPS26A-204ENST00000467852 USP48Q86UV5 1035 aa16.17■□□□□ 0.18
VPS26A-204ENST00000467852 NIM1KQ8IY84 436 aa16.17■□□□□ 0.18
VPS26A-204ENST00000467852 SLC52A2Q9HAB3 445 aa16.17■□□□□ 0.18
VPS26A-204ENST00000467852 GBA2Q9HCG7 927 aaPredicted RBP16.17■□□□□ 0.18
VPS26A-204ENST00000467852 COL4A5P29400 1685 aa16.16■□□□□ 0.18
VPS26A-204ENST00000467852 POTEFA5A3E0 1075 aa16.15■□□□□ 0.18
VPS26A-204ENST00000467852 SLC10A3P09131 477 aa16.15■□□□□ 0.18
VPS26A-204ENST00000467852 GRIPAP1Q4V328 841 aa16.15■□□□□ 0.18
VPS26A-204ENST00000467852 COL6A3P12111 3177 aa16.14■□□□□ 0.17
VPS26A-204ENST00000467852 POLKQ9UBT6 870 aa16.14■□□□□ 0.17
VPS26A-204ENST00000467852 POLR2AP24928 1970 aaKnown RBP16.14■□□□□ 0.17
VPS26A-204ENST00000467852 GMPSP49915 693 aaPredicted RBP16.13■□□□□ 0.17
VPS26A-204ENST00000467852 HIRAP54198 1017 aaPredicted RBP16.13■□□□□ 0.17
VPS26A-204ENST00000467852 TPTE2Q6XPS3 522 aa16.13■□□□□ 0.17
VPS26A-204ENST00000467852 TESK2Q96S53 571 aa16.13■□□□□ 0.17
VPS26A-204ENST00000467852 BCL2L13Q9BXK5 485 aa16.13■□□□□ 0.17
VPS26A-204ENST00000467852 TBC1D8O95759 1140 aa16.12■□□□□ 0.17
VPS26A-204ENST00000467852 IL6STP40189 918 aaPredicted RBP16.12■□□□□ 0.17
VPS26A-204ENST00000467852 PAPPA2Q9BXP8 1791 aa16.11■□□□□ 0.17
VPS26A-204ENST00000467852 CAMTA2O94983 1202 aa16.11■□□□□ 0.17
VPS26A-204ENST00000467852 CDHR2Q9BYE9 1310 aa16.11■□□□□ 0.17
VPS26A-204ENST00000467852 NPC1L1Q9UHC9 1359 aa16.11■□□□□ 0.17
VPS26A-204ENST00000467852 SNED1Q8TER0 1413 aa16.11■□□□□ 0.17
VPS26A-204ENST00000467852 GPR25O00155 361 aa16.1■□□□□ 0.17
VPS26A-204ENST00000467852 PPIP5K2O43314 1243 aa16.1■□□□□ 0.17
VPS26A-204ENST00000467852 CXCL9Q07325 125 aa16.1■□□□□ 0.17
VPS26A-204ENST00000467852 NOM1Q5C9Z4 860 aaKnown RBP16.1■□□□□ 0.17
VPS26A-204ENST00000467852 OTUD5Q96G74 571 aa16.1■□□□□ 0.17
VPS26A-204ENST00000467852 TEX13AQ9BXU3 409 aaPredicted RBP16.1■□□□□ 0.17
VPS26A-204ENST00000467852 RBBP6Q7Z6E9 1792 aaKnown RBP16.1■□□□□ 0.17
VPS26A-204ENST00000467852 H7C1D1 291 aa16.09■□□□□ 0.17
VPS26A-204ENST00000467852 DLK2Q6UY11 383 aa16.09■□□□□ 0.17
VPS26A-204ENST00000467852 KRT26Q7Z3Y9 468 aa16.09■□□□□ 0.17
VPS26A-204ENST00000467852 TRPM4Q8TD43 1214 aa16.09■□□□□ 0.17
VPS26A-204ENST00000467852 LGR6Q9HBX8 967 aa16.09■□□□□ 0.17
VPS26A-204ENST00000467852 FKTNO75072 461 aa16.08■□□□□ 0.16
VPS26A-204ENST00000467852 NEUROD1Q13562 356 aa16.08■□□□□ 0.16
VPS26A-204ENST00000467852 TTC5Q8N0Z6 440 aa16.08■□□□□ 0.16
VPS26A-204ENST00000467852 VPS33BQ9H267 617 aa16.08■□□□□ 0.16
VPS26A-204ENST00000467852 CNOT7Q9UIV1 285 aaKnown RBP16.08■□□□□ 0.16
VPS26A-204ENST00000467852 ZNRF3Q9ULT6 936 aa16.08■□□□□ 0.16
VPS26A-204ENST00000467852 EN2P19622 333 aaPredicted RBP16.07■□□□□ 0.16
VPS26A-204ENST00000467852 CLEC4GQ6UXB4 293 aa16.07■□□□□ 0.16
VPS26A-204ENST00000467852 DZIP3Q86Y13 1208 aaKnown RBP16.07■□□□□ 0.16
VPS26A-204ENST00000467852 SIN3AQ96ST3 1273 aa16.07■□□□□ 0.16
VPS26A-204ENST00000467852 ZNF652Q9Y2D9 606 aa16.07■□□□□ 0.16
VPS26A-204ENST00000467852 H0YGN5 161 aa16.06■□□□□ 0.16
VPS26A-204ENST00000467852 RNMTO43148 476 aaKnown RBP16.06■□□□□ 0.16
VPS26A-204ENST00000467852 GTF2E1P29083 439 aaPredicted RBP16.06■□□□□ 0.16
VPS26A-204ENST00000467852 TNIP1Q15025 636 aa16.06■□□□□ 0.16
VPS26A-204ENST00000467852 CHRDL2Q6WN34 429 aa16.06■□□□□ 0.16
VPS26A-204ENST00000467852 RASAL3Q86YV0 1011 aa16.06■□□□□ 0.16
VPS26A-204ENST00000467852 DCPSQ96C86 337 aaKnown RBP16.06■□□□□ 0.16
VPS26A-204ENST00000467852 AOC3Q16853 763 aa16.05■□□□□ 0.16
VPS26A-204ENST00000467852 AEBP1Q8IUX7 1158 aa16.05■□□□□ 0.16
VPS26A-204ENST00000467852 TMX4Q9H1E5 349 aaPredicted RBP16.05■□□□□ 0.16
VPS26A-204ENST00000467852 FAM177BA6PVY3 158 aa16.04■□□□□ 0.16
VPS26A-204ENST00000467852 TNNT2P45379 298 aaPredicted RBP16.04■□□□□ 0.16
VPS26A-204ENST00000467852 CARD14Q9BXL6 1004 aa16.04■□□□□ 0.16
VPS26A-204ENST00000467852 UBR2Q8IWV8 1755 aa16.04■□□□□ 0.16
VPS26A-204ENST00000467852 CENPFP49454 3210 aa16.04■□□□□ 0.16
VPS26A-204ENST00000467852 RPGRQ92834 1020 aaKnown RBP16.03■□□□□ 0.16
VPS26A-204ENST00000467852 TMEM106CQ9BVX2 250 aa16.03■□□□□ 0.16
VPS26A-204ENST00000467852 RBM27Q9P2N5 1060 aaKnown RBP16.03■□□□□ 0.16
VPS26A-204ENST00000467852 MRC1P22897 1456 aa16.03■□□□□ 0.16
VPS26A-204ENST00000467852 ADM5C9JUS6 153 aa16.02■□□□□ 0.16
VPS26A-204ENST00000467852 A1BGP04217 495 aa16.02■□□□□ 0.16
VPS26A-204ENST00000467852 SULT6B1Q6IMI4 303 aa16.02■□□□□ 0.16
VPS26A-204ENST00000467852 MICALL2Q8IY33 904 aa16.02■□□□□ 0.16
VPS26A-204ENST00000467852 NIP7Q9Y221 180 aaKnown RBP eCLIP16.02■□□□□ 0.16
VPS26A-204ENST00000467852 TRIM17Q9Y577 477 aa16.02■□□□□ 0.16
VPS26A-204ENST00000467852 TCERG1O14776 1098 aaKnown RBP16.01■□□□□ 0.15
VPS26A-204ENST00000467852 RAD17O75943 681 aa16.01■□□□□ 0.15
VPS26A-204ENST00000467852 CRY2Q49AN0 593 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms