RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 ALDH1L1O75891 902 aa8.64□□□□□ -1.03
SCAF4-204ENST00000467731 FLAD1Q8NFF5 587 aa8.64□□□□□ -1.03
SCAF4-204ENST00000467731 ISCA1Q9BUE6 129 aa8.64□□□□□ -1.03
SCAF4-204ENST00000467731 UBN2Q6ZU65 1347 aa8.64□□□□□ -1.03
SCAF4-204ENST00000467731 MSH5O43196 834 aa8.64□□□□□ -1.03
SCAF4-204ENST00000467731 GCKRQ14397 625 aa8.64□□□□□ -1.03
SCAF4-204ENST00000467731 USP44Q9H0E7 712 aa8.64□□□□□ -1.03
SCAF4-204ENST00000467731 NBPF7P0C2Y1 421 aaPredicted RBP8.63□□□□□ -1.03
SCAF4-204ENST00000467731 GYS1P13807 737 aa8.63□□□□□ -1.03
SCAF4-204ENST00000467731 TBC1D9BQ66K14 1250 aa8.63□□□□□ -1.03
SCAF4-204ENST00000467731 ZNF34Q8IZ26 560 aa8.63□□□□□ -1.03
SCAF4-204ENST00000467731 CCDC191Q8NCU4 936 aa8.63□□□□□ -1.03
SCAF4-204ENST00000467731 CWC25Q9NXE8 425 aaPredicted RBP8.63□□□□□ -1.03
SCAF4-204ENST00000467731 C9orf78Q9NZ63 289 aaPredicted RBP8.63□□□□□ -1.03
SCAF4-204ENST00000467731 NIP7Q9Y221 180 aaKnown RBP eCLIP8.63□□□□□ -1.03
SCAF4-204ENST00000467731 GRM8O00222 908 aa8.63□□□□□ -1.03
SCAF4-204ENST00000467731 FGD1P98174 961 aa8.63□□□□□ -1.03
SCAF4-204ENST00000467731 TRIM28Q13263 835 aaKnown RBP8.63□□□□□ -1.03
SCAF4-204ENST00000467731 BICDL1Q6ZP65 573 aa8.63□□□□□ -1.03
SCAF4-204ENST00000467731 NLRP10Q86W26 655 aa8.63□□□□□ -1.03
SCAF4-204ENST00000467731 ZBTB40Q9NUA8 1239 aa8.63□□□□□ -1.03
SCAF4-204ENST00000467731 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.63□□□□□ -1.03
SCAF4-204ENST00000467731 RGL2O15211 777 aa8.62□□□□□ -1.03
SCAF4-204ENST00000467731 RTL5Q5HYW3 569 aaPredicted RBP8.62□□□□□ -1.03
SCAF4-204ENST00000467731 C1orf115Q9H7X2 142 aa8.62□□□□□ -1.03
SCAF4-204ENST00000467731 COL24A1Q17RW2 1714 aa8.62□□□□□ -1.03
SCAF4-204ENST00000467731 JARID2Q92833 1246 aaPredicted RBP8.62□□□□□ -1.03
SCAF4-204ENST00000467731 PDGFDQ9GZP0 370 aaPredicted RBP8.62□□□□□ -1.03
SCAF4-204ENST00000467731 IBTKQ9P2D0 1353 aaPredicted RBP8.62□□□□□ -1.03
SCAF4-204ENST00000467731 MYH3P11055 1940 aa8.62□□□□□ -1.03
SCAF4-204ENST00000467731 FAM177BA6PVY3 158 aa8.61□□□□□ -1.03
SCAF4-204ENST00000467731 GNAI3P08754 354 aa8.61□□□□□ -1.03
SCAF4-204ENST00000467731 UBTFL1P0CB47 393 aaPredicted RBP8.61□□□□□ -1.03
SCAF4-204ENST00000467731 UBE3BQ7Z3V4 1068 aa8.61□□□□□ -1.03
SCAF4-204ENST00000467731 CHMP4BQ9H444 224 aaKnown RBP8.61□□□□□ -1.03
SCAF4-204ENST00000467731 UTYO14607 1347 aa8.61□□□□□ -1.03
SCAF4-204ENST00000467731 PARP10Q53GL7 1025 aa8.61□□□□□ -1.03
SCAF4-204ENST00000467731 SUSD4Q5VX71 490 aa8.61□□□□□ -1.03
SCAF4-204ENST00000467731 FAM89AQ96GI7 184 aa8.61□□□□□ -1.03
SCAF4-204ENST00000467731 SETDB2Q96T68 719 aa8.61□□□□□ -1.03
SCAF4-204ENST00000467731 NFIXQ14938 502 aa8.61□□□□□ -1.03
SCAF4-204ENST00000467731 GLIPR1L2Q4G1C9 344 aa8.61□□□□□ -1.03
SCAF4-204ENST00000467731 TRMT112Q9UI30 125 aaKnown RBP8.61□□□□□ -1.03
SCAF4-204ENST00000467731 MSL1Q68DK7 614 aa8.6□□□□□ -1.03
SCAF4-204ENST00000467731 SYNE4Q8N205 404 aa8.6□□□□□ -1.03
SCAF4-204ENST00000467731 ZBTB38Q8NAP3 1195 aaPredicted RBP8.6□□□□□ -1.03
SCAF4-204ENST00000467731 LRRFIP2Q9Y608 721 aaKnown RBP8.6□□□□□ -1.03
SCAF4-204ENST00000467731 CASZ1Q86V15 1759 aa8.6□□□□□ -1.03
SCAF4-204ENST00000467731 UTRNP46939 3433 aa8.6□□□□□ -1.03
SCAF4-204ENST00000467731 H7C1W4 665 aa8.6□□□□□ -1.03
SCAF4-204ENST00000467731 NTSR2O95665 410 aa8.6□□□□□ -1.03
SCAF4-204ENST00000467731 GNAI2P04899 355 aa8.6□□□□□ -1.03
SCAF4-204ENST00000467731 CASP7P55210 303 aa8.6□□□□□ -1.03
SCAF4-204ENST00000467731 AAMPQ13685 434 aa8.6□□□□□ -1.03
SCAF4-204ENST00000467731 PPP1R42Q7Z4L9 355 aa8.6□□□□□ -1.03
SCAF4-204ENST00000467731 DDX60Q8IY21 1712 aaKnown RBP8.6□□□□□ -1.03
SCAF4-204ENST00000467731 PCDHB15Q9Y5E8 787 aa8.6□□□□□ -1.03
SCAF4-204ENST00000467731 CARMIL3Q8ND23 1372 aa8.6□□□□□ -1.03
SCAF4-204ENST00000467731 PCCAP05165 728 aaPredicted RBP8.59□□□□□ -1.03
SCAF4-204ENST00000467731 R3HDM1Q15032 1099 aaKnown RBP8.59□□□□□ -1.03
SCAF4-204ENST00000467731 NUTM1Q86Y26 1132 aa8.59□□□□□ -1.03
SCAF4-204ENST00000467731 NLGN1Q8N2Q7 840 aa8.59□□□□□ -1.03
SCAF4-204ENST00000467731 KAZALD1Q96I82 304 aa8.59□□□□□ -1.03
SCAF4-204ENST00000467731 SUCLG2Q96I99 432 aa8.59□□□□□ -1.03
SCAF4-204ENST00000467731 UTP14AQ9BVJ6 771 aaKnown RBP8.59□□□□□ -1.03
SCAF4-204ENST00000467731 LAMB2P55268 1798 aa8.59□□□□□ -1.03
SCAF4-204ENST00000467731 TM4SF1P30408 202 aa8.59□□□□□ -1.03
SCAF4-204ENST00000467731 NBPF5PQ86XG9 351 aaPredicted RBP8.59□□□□□ -1.03
SCAF4-204ENST00000467731 SH3TC1Q8TE82 1336 aa8.59□□□□□ -1.03
SCAF4-204ENST00000467731 BICC1Q9H694 974 aaKnown RBP8.58□□□□□ -1.04
SCAF4-204ENST00000467731 DDR1Q08345 913 aa8.58□□□□□ -1.04
SCAF4-204ENST00000467731 EPHA10Q5JZY3 1008 aa8.58□□□□□ -1.04
SCAF4-204ENST00000467731 CEP85Q6P2H3 762 aa8.58□□□□□ -1.04
SCAF4-204ENST00000467731 CDHR2Q9BYE9 1310 aa8.58□□□□□ -1.04
SCAF4-204ENST00000467731 PSDA5PKW4 1024 aaPredicted RBP8.58□□□□□ -1.04
SCAF4-204ENST00000467731 POLRMTO00411 1230 aaKnown RBP8.58□□□□□ -1.04
SCAF4-204ENST00000467731 IRS4O14654 1257 aaPredicted RBP8.58□□□□□ -1.04
SCAF4-204ENST00000467731 GTF2E1P29083 439 aaPredicted RBP8.58□□□□□ -1.04
SCAF4-204ENST00000467731 NYXQ9GZU5 481 aa8.58□□□□□ -1.04
SCAF4-204ENST00000467731 PPP4R2Q9NY27 417 aa8.58□□□□□ -1.04
SCAF4-204ENST00000467731 NRXN2Q9P2S2 1712 aa8.57□□□□□ -1.04
SCAF4-204ENST00000467731 NPHP1O15259 732 aa8.57□□□□□ -1.04
SCAF4-204ENST00000467731 SERPINB2P05120 415 aa8.57□□□□□ -1.04
SCAF4-204ENST00000467731 MMP10P09238 476 aa8.57□□□□□ -1.04
SCAF4-204ENST00000467731 HCLS1P14317 486 aaPredicted RBP8.57□□□□□ -1.04
SCAF4-204ENST00000467731 ERFEQ4G0M1 354 aa8.57□□□□□ -1.04
SCAF4-204ENST00000467731 TPTE2Q6XPS3 522 aa8.57□□□□□ -1.04
SCAF4-204ENST00000467731 CCDC24Q8N4L8 307 aa8.57□□□□□ -1.04
SCAF4-204ENST00000467731 HDAC5Q9UQL6 1122 aa8.57□□□□□ -1.04
SCAF4-204ENST00000467731 ABCC12Q96J65 1359 aa8.57□□□□□ -1.04
SCAF4-204ENST00000467731 B4GALNT3Q6L9W6 998 aa8.57□□□□□ -1.04
SCAF4-204ENST00000467731 SIRT2Q8IXJ6 389 aa8.57□□□□□ -1.04
SCAF4-204ENST00000467731 CNBD1Q8NA66 436 aa8.57□□□□□ -1.04
SCAF4-204ENST00000467731 SLC16A10Q8TF71 515 aa8.57□□□□□ -1.04
SCAF4-204ENST00000467731 PNMA6EA0A0J9YXQ4 647 aa8.56□□□□□ -1.04
SCAF4-204ENST00000467731 ZBTB7AO95365 584 aa8.56□□□□□ -1.04
SCAF4-204ENST00000467731 FOXO4P98177 505 aa8.56□□□□□ -1.04
SCAF4-204ENST00000467731 PRR5LQ6MZQ0 368 aa8.56□□□□□ -1.04
SCAF4-204ENST00000467731 ANKRD44Q8N8A2 993 aa8.56□□□□□ -1.04
SCAF4-204ENST00000467731 PLA2G12BQ9BX93 195 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms