RNA–Protein interactions for RNA: ENST00000467706.1

NOD1-207, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 905 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-207ENST00000467706 NUCB1Q02818 461 aa15.2■□□□□ 0.02
NOD1-207ENST00000467706 POLA2Q14181 598 aa15.2■□□□□ 0.02
NOD1-207ENST00000467706 SKAP1Q86WV1 359 aa15.2■□□□□ 0.02
NOD1-207ENST00000467706 PROM2Q8N271 834 aa15.2■□□□□ 0.02
NOD1-207ENST00000467706 NARFQ9UHQ1 456 aa15.2■□□□□ 0.02
NOD1-207ENST00000467706 UBR3Q6ZT12 1888 aa15.2■□□□□ 0.02
NOD1-207ENST00000467706 C4AP0C0L4 1744 aa15.2■□□□□ 0.02
NOD1-207ENST00000467706 EP400Q96L91 3159 aa15.19■□□□□ 0.02
NOD1-207ENST00000467706 ZPR1O75312 459 aa15.19■□□□□ 0.02
NOD1-207ENST00000467706 PHF14O94880 888 aa15.19■□□□□ 0.02
NOD1-207ENST00000467706 ADRA2BP18089 450 aa15.19■□□□□ 0.02
NOD1-207ENST00000467706 RGS3P49796 1198 aa15.19■□□□□ 0.02
NOD1-207ENST00000467706 RTL5Q5HYW3 569 aaPredicted RBP15.19■□□□□ 0.02
NOD1-207ENST00000467706 TRAPPC3LQ5T215 181 aa15.19■□□□□ 0.02
NOD1-207ENST00000467706 ANKRD45Q5TZF3 282 aa15.19■□□□□ 0.02
NOD1-207ENST00000467706 CLEC4GQ6UXB4 293 aa15.19■□□□□ 0.02
NOD1-207ENST00000467706 SMIM5Q71RC9 77 aa15.19■□□□□ 0.02
NOD1-207ENST00000467706 ZBTB38Q8NAP3 1195 aaPredicted RBP15.19■□□□□ 0.02
NOD1-207ENST00000467706 ZBTB47Q9UFB7 747 aaPredicted RBP15.19■□□□□ 0.02
NOD1-207ENST00000467706 UBN2Q6ZU65 1347 aa15.18■□□□□ 0.02
NOD1-207ENST00000467706 PARP10Q53GL7 1025 aa15.18■□□□□ 0.02
NOD1-207ENST00000467706 EPHA10Q5JZY3 1008 aa15.18■□□□□ 0.02
NOD1-207ENST00000467706 CHD1LQ86WJ1 897 aa15.18■□□□□ 0.02
NOD1-207ENST00000467706 ARHGEF1Q92888 912 aaKnown RBP15.18■□□□□ 0.02
NOD1-207ENST00000467706 TRMT112Q9UI30 125 aaKnown RBP15.18■□□□□ 0.02
NOD1-207ENST00000467706 NIP7Q9Y221 180 aaKnown RBP eCLIP15.18■□□□□ 0.02
NOD1-207ENST00000467706 CDHR2Q9BYE9 1310 aa15.17■□□□□ 0.02
NOD1-207ENST00000467706 SSFA2P28290 1259 aa15.17■□□□□ 0.02
NOD1-207ENST00000467706 RFC4P35249 363 aa15.17■□□□□ 0.02
NOD1-207ENST00000467706 RABL6Q3YEC7 729 aaPredicted RBP15.17■□□□□ 0.02
NOD1-207ENST00000467706 USPL1Q5W0Q7 1092 aa15.17■□□□□ 0.02
NOD1-207ENST00000467706 AMIGO3Q86WK7 504 aa15.17■□□□□ 0.02
NOD1-207ENST00000467706 SRP68Q9UHB9 627 aaKnown RBP15.17■□□□□ 0.02
NOD1-207ENST00000467706 EXOC6BQ9Y2D4 811 aa15.17■□□□□ 0.02
NOD1-207ENST00000467706 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.16■□□□□ 0.02
NOD1-207ENST00000467706 APBB1O00213 710 aa15.16■□□□□ 0.02
NOD1-207ENST00000467706 FOXO4P98177 505 aa15.16■□□□□ 0.02
NOD1-207ENST00000467706 SF3B2Q13435 895 aaKnown RBP15.16■□□□□ 0.02
NOD1-207ENST00000467706 FAM89AQ96GI7 184 aa15.16■□□□□ 0.02
NOD1-207ENST00000467706 UTP14AQ9BVJ6 771 aaKnown RBP15.16■□□□□ 0.02
NOD1-207ENST00000467706 LNPKQ9C0E8 428 aa15.16■□□□□ 0.02
NOD1-207ENST00000467706 USP42Q9H9J4 1324 aaKnown RBP15.16■□□□□ 0.02
NOD1-207ENST00000467706 SURF6O75683 361 aaKnown RBP15.15■□□□□ 0.02
NOD1-207ENST00000467706 HSP90AB4PQ58FF6 505 aa15.15■□□□□ 0.02
NOD1-207ENST00000467706 SUSD4Q5VX71 490 aa15.15■□□□□ 0.02
NOD1-207ENST00000467706 LMBR1LQ6UX01 489 aa15.15■□□□□ 0.02
NOD1-207ENST00000467706 PLA2G12BQ9BX93 195 aa15.15■□□□□ 0.02
NOD1-207ENST00000467706 BCL2L12Q9HB09 334 aa15.15■□□□□ 0.02
NOD1-207ENST00000467706 FAM177BA6PVY3 158 aa15.14■□□□□ 0.01
NOD1-207ENST00000467706 IRS4O14654 1257 aaPredicted RBP15.14■□□□□ 0.01
NOD1-207ENST00000467706 RAB11FIP3O75154 756 aa15.14■□□□□ 0.01
NOD1-207ENST00000467706 PDE4AP27815 886 aa15.14■□□□□ 0.01
NOD1-207ENST00000467706 OS9Q13438 667 aaPredicted RBP15.14■□□□□ 0.01
NOD1-207ENST00000467706 LRRCC1Q9C099 1032 aa15.14■□□□□ 0.01
NOD1-207ENST00000467706 CHMP3Q9Y3E7 222 aa15.14■□□□□ 0.01
NOD1-207ENST00000467706 SH3TC1Q8TE82 1336 aa15.14■□□□□ 0.01
NOD1-207ENST00000467706 NTSR2O95665 410 aa15.13■□□□□ 0.01
NOD1-207ENST00000467706 ZNF827Q17R98 1081 aa15.13■□□□□ 0.01
NOD1-207ENST00000467706 COL24A1Q17RW2 1714 aa15.13■□□□□ 0.01
NOD1-207ENST00000467706 TBC1D9BQ66K14 1250 aa15.13■□□□□ 0.01
NOD1-207ENST00000467706 BICDL1Q6ZP65 573 aa15.13■□□□□ 0.01
NOD1-207ENST00000467706 AKT1S1Q96B36 256 aa15.13■□□□□ 0.01
NOD1-207ENST00000467706 TFCP2L1Q9NZI6 479 aa15.13■□□□□ 0.01
NOD1-207ENST00000467706 NOP58Q9Y2X3 529 aaKnown RBP15.13■□□□□ 0.01
NOD1-207ENST00000467706 LAMB2P55268 1798 aa15.13■□□□□ 0.01
NOD1-207ENST00000467706 MYH3P11055 1940 aa15.12■□□□□ 0.01
NOD1-207ENST00000467706 SMARCA5O60264 1052 aaPredicted RBP15.12■□□□□ 0.01
NOD1-207ENST00000467706 HSP90B1P14625 803 aaKnown RBP15.12■□□□□ 0.01
NOD1-207ENST00000467706 BAG6P46379 1132 aa15.12■□□□□ 0.01
NOD1-207ENST00000467706 EN1Q05925 392 aaPredicted RBP15.12■□□□□ 0.01
NOD1-207ENST00000467706 EZH2Q15910 746 aaKnown RBP15.12■□□□□ 0.01
NOD1-207ENST00000467706 SYNE4Q8N205 404 aa15.12■□□□□ 0.01
NOD1-207ENST00000467706 CAMKK2Q96RR4 588 aa15.12■□□□□ 0.01
NOD1-207ENST00000467706 SETDB2Q96T68 719 aa15.12■□□□□ 0.01
NOD1-207ENST00000467706 PA2G4Q9UQ80 394 aaKnown RBP15.12■□□□□ 0.01
NOD1-207ENST00000467706 TUBGCP6Q96RT7 1819 aa15.11■□□□□ 0.01
NOD1-207ENST00000467706 PDE8AO60658 829 aa15.11■□□□□ 0.01
NOD1-207ENST00000467706 RFX5P48382 616 aaPredicted RBP15.11■□□□□ 0.01
NOD1-207ENST00000467706 G3BP1Q13283 466 aaKnown RBP eCLIP15.11■□□□□ 0.01
NOD1-207ENST00000467706 ERC1Q8IUD2 1116 aa15.11■□□□□ 0.01
NOD1-207ENST00000467706 FLAD1Q8NFF5 587 aa15.11■□□□□ 0.01
NOD1-207ENST00000467706 KIF1BPQ96EK5 621 aa15.11■□□□□ 0.01
NOD1-207ENST00000467706 BCL11AQ9H165 835 aa15.11■□□□□ 0.01
NOD1-207ENST00000467706 COPRSQ9NQ92 184 aa15.11■□□□□ 0.01
NOD1-207ENST00000467706 DDX60Q8IY21 1712 aaKnown RBP15.1■□□□□ 0.01
NOD1-207ENST00000467706 CTSWP56202 376 aa15.1■□□□□ 0.01
NOD1-207ENST00000467706 RHPN1Q8TCX5 695 aa15.1■□□□□ 0.01
NOD1-207ENST00000467706 NYXQ9GZU5 481 aa15.1■□□□□ 0.01
NOD1-207ENST00000467706 SIL1Q9H173 461 aa15.1■□□□□ 0.01
NOD1-207ENST00000467706 CSF1RP07333 972 aa15.09■□□□□ 0.01
NOD1-207ENST00000467706 HCLS1P14317 486 aaPredicted RBP15.09■□□□□ 0.01
NOD1-207ENST00000467706 GTF2E1P29083 439 aaPredicted RBP15.09■□□□□ 0.01
NOD1-207ENST00000467706 PTPN12Q05209 780 aaKnown RBP15.09■□□□□ 0.01
NOD1-207ENST00000467706 CCDC57Q2TAC2 916 aa15.09■□□□□ 0.01
NOD1-207ENST00000467706 NBPF5PQ86XG9 351 aaPredicted RBP15.09■□□□□ 0.01
NOD1-207ENST00000467706 NUTM1Q86Y26 1132 aa15.09■□□□□ 0.01
NOD1-207ENST00000467706 KLHDC4Q8TBB5 520 aa15.09■□□□□ 0.01
NOD1-207ENST00000467706 CARMIL3Q8ND23 1372 aa15.09■□□□□ 0.01
NOD1-207ENST00000467706 MSH5O43196 834 aa15.08■□□□□ 0
NOD1-207ENST00000467706 GYS1P13807 737 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms