RNA–Protein interactions for RNA: ENST00000467539.1

CGREF1-208, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 4

Gene CGREF1, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-208ENST00000467539 COL11A2P13942 1736 aaPredicted RBP23.47■■□□□ 1.35
CGREF1-208ENST00000467539 SLX4Q8IY92 1834 aa23.47■■□□□ 1.35
CGREF1-208ENST00000467539 SBF1O95248 1867 aa23.47■■□□□ 1.35
CGREF1-208ENST00000467539 WDR63Q8IWG1 891 aa23.47■■□□□ 1.35
CGREF1-208ENST00000467539 NLRP3Q96P20 1036 aa23.47■■□□□ 1.35
CGREF1-208ENST00000467539 RNF123Q5XPI4 1314 aa23.47■■□□□ 1.35
CGREF1-208ENST00000467539 ABCC12Q96J65 1359 aa23.47■■□□□ 1.35
CGREF1-208ENST00000467539 RIC1Q4ADV7 1423 aa23.47■■□□□ 1.35
CGREF1-208ENST00000467539 CCDC30Q5VVM6 783 aa23.46■■□□□ 1.35
CGREF1-208ENST00000467539 FAM9BQ8IZU0 186 aa23.46■■□□□ 1.35
CGREF1-208ENST00000467539 KDM2BQ8NHM5 1336 aa23.45■■□□□ 1.34
CGREF1-208ENST00000467539 TSPYL6Q8N831 410 aa23.45■■□□□ 1.34
CGREF1-208ENST00000467539 TSR2Q969E8 191 aaKnown RBP23.45■■□□□ 1.34
CGREF1-208ENST00000467539 CRAMP1Q96RY5 1269 aa23.45■■□□□ 1.34
CGREF1-208ENST00000467539 TAOK3Q9H2K8 898 aa23.45■■□□□ 1.34
CGREF1-208ENST00000467539 TRIM28Q13263 835 aaKnown RBP23.44■■□□□ 1.34
CGREF1-208ENST00000467539 CCDC93Q567U6 631 aa23.44■■□□□ 1.34
CGREF1-208ENST00000467539 RTKN2Q8IZC4 609 aa23.44■■□□□ 1.34
CGREF1-208ENST00000467539 RPGRQ92834 1020 aaKnown RBP23.44■■□□□ 1.34
CGREF1-208ENST00000467539 RBM17Q96I25 401 aaKnown RBP23.44■■□□□ 1.34
CGREF1-208ENST00000467539 ISCA1Q9BUE6 129 aa23.44■■□□□ 1.34
CGREF1-208ENST00000467539 PHAXQ9H814 394 aaKnown RBP23.44■■□□□ 1.34
CGREF1-208ENST00000467539 TRMT112Q9UI30 125 aaKnown RBP23.44■■□□□ 1.34
CGREF1-208ENST00000467539 NMRK2Q9NPI5 230 aa23.43■■□□□ 1.34
CGREF1-208ENST00000467539 SALL2Q9Y467 1007 aaPredicted RBP23.43■■□□□ 1.34
CGREF1-208ENST00000467539 GLTPD2A6NH11 291 aa23.42■■□□□ 1.34
CGREF1-208ENST00000467539 CC2D2BQ6DHV5 1058 aa23.42■■□□□ 1.34
CGREF1-208ENST00000467539 C3orf67Q6ZVT6 689 aa23.42■■□□□ 1.34
CGREF1-208ENST00000467539 RIC3Q7Z5B4 369 aa23.41■■□□□ 1.34
CGREF1-208ENST00000467539 SYNE4Q8N205 404 aa23.41■■□□□ 1.34
CGREF1-208ENST00000467539 SH3TC1Q8TE82 1336 aa23.4■■□□□ 1.34
CGREF1-208ENST00000467539 TOMM70O94826 608 aa23.4■■□□□ 1.34
CGREF1-208ENST00000467539 FKBP4Q02790 459 aaKnown RBP eCLIP23.4■■□□□ 1.34
CGREF1-208ENST00000467539 GOLGA2Q08379 1002 aa23.4■■□□□ 1.34
CGREF1-208ENST00000467539 DPY19L2Q6NUT2 758 aa23.4■■□□□ 1.34
CGREF1-208ENST00000467539 OLFM4Q6UX06 510 aa23.4■■□□□ 1.34
CGREF1-208ENST00000467539 RRAGCQ9HB90 399 aa23.4■■□□□ 1.34
CGREF1-208ENST00000467539 FER1L6Q2WGJ9 1857 aa23.4■■□□□ 1.34
CGREF1-208ENST00000467539 ATP5J2-PTCD1G3V325 749 aa23.39■■□□□ 1.33
CGREF1-208ENST00000467539 HCLS1P14317 486 aaPredicted RBP23.39■■□□□ 1.33
CGREF1-208ENST00000467539 TWISTNBQ3B726 338 aaPredicted RBP23.39■■□□□ 1.33
CGREF1-208ENST00000467539 GRIPAP1Q4V328 841 aa23.39■■□□□ 1.33
CGREF1-208ENST00000467539 ARFGEF2Q9Y6D5 1785 aa23.37■■□□□ 1.33
CGREF1-208ENST00000467539 DDX58O95786 925 aaKnown RBP23.37■■□□□ 1.33
CGREF1-208ENST00000467539 TNRC6CQ9HCJ0 1690 aaKnown RBP23.36■■□□□ 1.33
CGREF1-208ENST00000467539 BBOX1O75936 387 aa23.36■■□□□ 1.33
CGREF1-208ENST00000467539 FAM89AQ96GI7 184 aa23.36■■□□□ 1.33
CGREF1-208ENST00000467539 PSMD1Q99460 953 aa23.36■■□□□ 1.33
CGREF1-208ENST00000467539 STK31Q9BXU1 1019 aa23.36■■□□□ 1.33
CGREF1-208ENST00000467539 CCDC88AQ3V6T2 1871 aa23.35■■□□□ 1.33
CGREF1-208ENST00000467539 FANCIQ9NVI1 1328 aa23.34■■□□□ 1.33
CGREF1-208ENST00000467539 VAMP4O75379 141 aa23.34■■□□□ 1.33
CGREF1-208ENST00000467539 SLC4A2P04920 1241 aa23.34■■□□□ 1.33
CGREF1-208ENST00000467539 VEGFAP15692 232 aaPredicted RBP23.34■■□□□ 1.33
CGREF1-208ENST00000467539 C16orf71Q8IYS4 520 aaPredicted RBP23.34■■□□□ 1.33
CGREF1-208ENST00000467539 CCDC191Q8NCU4 936 aa23.34■■□□□ 1.33
CGREF1-208ENST00000467539 METTL22Q9BUU2 404 aaPredicted RBP23.34■■□□□ 1.33
CGREF1-208ENST00000467539 ZNF277Q9NRM2 450 aaPredicted RBP23.34■■□□□ 1.33
CGREF1-208ENST00000467539 CACNA1SQ13698 1873 aa23.33■■□□□ 1.33
CGREF1-208ENST00000467539 ANKRD36CQ5JPF3 1778 aa23.33■■□□□ 1.33
CGREF1-208ENST00000467539 PPEF1O14829 653 aaPredicted RBP23.33■■□□□ 1.33
CGREF1-208ENST00000467539 SF3B3Q15393 1217 aaKnown RBP23.33■■□□□ 1.33
CGREF1-208ENST00000467539 KSR2Q6VAB6 950 aa23.33■■□□□ 1.33
CGREF1-208ENST00000467539 DDX46Q7L014 1031 aaKnown RBP23.33■■□□□ 1.33
CGREF1-208ENST00000467539 RBM46Q8TBY0 533 aaKnown RBP23.33■■□□□ 1.33
CGREF1-208ENST00000467539 ZNF428Q96B54 188 aa23.33■■□□□ 1.33
CGREF1-208ENST00000467539 MYD88Q99836 296 aa23.33■■□□□ 1.33
CGREF1-208ENST00000467539 SPINK5Q9NQ38 1064 aaPredicted RBP23.33■■□□□ 1.33
CGREF1-208ENST00000467539 ATP6V0A2Q9Y487 856 aa23.33■■□□□ 1.33
CGREF1-208ENST00000467539 TCERG1O14776 1098 aaKnown RBP23.32■■□□□ 1.32
CGREF1-208ENST00000467539 ZBTB38Q8NAP3 1195 aaPredicted RBP23.32■■□□□ 1.32
CGREF1-208ENST00000467539 TMX4Q9H1E5 349 aaPredicted RBP23.32■■□□□ 1.32
CGREF1-208ENST00000467539 PI4KAP2A4QPH2 592 aa23.31■■□□□ 1.32
CGREF1-208ENST00000467539 POTECB2RU33 542 aa23.31■■□□□ 1.32
CGREF1-208ENST00000467539 IARSP41252 1262 aaKnown RBP23.31■■□□□ 1.32
CGREF1-208ENST00000467539 EXOSC9Q06265 439 aaKnown RBP23.31■■□□□ 1.32
CGREF1-208ENST00000467539 SP8Q8IXZ3 490 aa23.31■■□□□ 1.32
CGREF1-208ENST00000467539 PI4KAP1Q8N8J0 262 aa23.31■■□□□ 1.32
CGREF1-208ENST00000467539 MYH16Q9H6N6 1097 aa23.31■■□□□ 1.32
CGREF1-208ENST00000467539 MAP3K2Q9Y2U5 619 aa23.31■■□□□ 1.32
CGREF1-208ENST00000467539 SNED1Q8TER0 1413 aa23.31■■□□□ 1.32
CGREF1-208ENST00000467539 ABCC4O15439 1325 aa23.31■■□□□ 1.32
CGREF1-208ENST00000467539 IRS4O14654 1257 aaPredicted RBP23.3■■□□□ 1.32
CGREF1-208ENST00000467539 HSPA6P17066 643 aa23.3■■□□□ 1.32
CGREF1-208ENST00000467539 G2E3Q7L622 706 aa23.3■■□□□ 1.32
CGREF1-208ENST00000467539 DICER1Q9UPY3 1922 aaKnown RBP23.29■■□□□ 1.32
CGREF1-208ENST00000467539 HSP90B1P14625 803 aaKnown RBP23.29■■□□□ 1.32
CGREF1-208ENST00000467539 GRAPQ13588 217 aa23.29■■□□□ 1.32
CGREF1-208ENST00000467539 RTL5Q5HYW3 569 aaPredicted RBP23.29■■□□□ 1.32
CGREF1-208ENST00000467539 GRAPLQ8TC17 118 aaPredicted RBP23.29■■□□□ 1.32
CGREF1-208ENST00000467539 CWC25Q9NXE8 425 aaPredicted RBP23.29■■□□□ 1.32
CGREF1-208ENST00000467539 DDNO94850 711 aaPredicted RBP23.28■■□□□ 1.32
CGREF1-208ENST00000467539 PCCAP05165 728 aaPredicted RBP23.28■■□□□ 1.32
CGREF1-208ENST00000467539 VPS33BQ9H267 617 aa23.28■■□□□ 1.32
CGREF1-208ENST00000467539 FZD9O00144 591 aa23.27■■□□□ 1.32
CGREF1-208ENST00000467539 FSTL1Q12841 308 aa23.27■■□□□ 1.32
CGREF1-208ENST00000467539 TMC4Q7Z404 712 aa23.27■■□□□ 1.32
CGREF1-208ENST00000467539 JDP2Q8WYK2 163 aa23.27■■□□□ 1.32
CGREF1-208ENST00000467539 ZNF521Q96K83 1311 aa23.27■■□□□ 1.32
CGREF1-208ENST00000467539 CCER2I3L3R5 266 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms