RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 CC2D2BQ6DHV5 1058 aa13.94□□□□□ -0.18
HDAC3-203ENST00000467533 ZNF790Q6PG37 636 aa13.94□□□□□ -0.18
HDAC3-203ENST00000467533 MORC1Q86VD1 984 aa13.94□□□□□ -0.18
HDAC3-203ENST00000467533 FMNL2Q96PY5 1086 aa13.94□□□□□ -0.18
HDAC3-203ENST00000467533 NIP7Q9Y221 180 aaKnown RBP eCLIP13.94□□□□□ -0.18
HDAC3-203ENST00000467533 GTF2E1P29083 439 aaPredicted RBP13.93□□□□□ -0.18
HDAC3-203ENST00000467533 PIP4K2AP48426 406 aaPredicted RBP13.93□□□□□ -0.18
HDAC3-203ENST00000467533 CLEC4GQ6UXB4 293 aa13.93□□□□□ -0.18
HDAC3-203ENST00000467533 CTU1Q7Z7A3 348 aaKnown RBP13.93□□□□□ -0.18
HDAC3-203ENST00000467533 TRPA1O75762 1119 aa13.92□□□□□ -0.18
HDAC3-203ENST00000467533 HPS5Q9UPZ3 1129 aa13.92□□□□□ -0.18
HDAC3-203ENST00000467533 PPIP5K2O43314 1243 aa13.91□□□□□ -0.18
HDAC3-203ENST00000467533 RGMBQ6NW40 437 aa13.91□□□□□ -0.18
HDAC3-203ENST00000467533 CDC37L1Q7L3B6 337 aa13.91□□□□□ -0.18
HDAC3-203ENST00000467533 RPGRQ92834 1020 aaKnown RBP13.91□□□□□ -0.18
HDAC3-203ENST00000467533 ABCC12Q96J65 1359 aa13.91□□□□□ -0.18
HDAC3-203ENST00000467533 NPC1L1Q9UHC9 1359 aa13.91□□□□□ -0.18
HDAC3-203ENST00000467533 GMPSP49915 693 aaPredicted RBP13.9□□□□□ -0.18
HDAC3-203ENST00000467533 KIF23Q02241 960 aaPredicted RBP13.9□□□□□ -0.18
HDAC3-203ENST00000467533 HABP4Q5JVS0 413 aaKnown RBP13.9□□□□□ -0.18
HDAC3-203ENST00000467533 RNF186Q9NXI6 227 aa13.9□□□□□ -0.18
HDAC3-203ENST00000467533 FAM155AB1AL88 458 aaPredicted RBP13.89□□□□□ -0.19
HDAC3-203ENST00000467533 TCERG1O14776 1098 aaKnown RBP13.89□□□□□ -0.19
HDAC3-203ENST00000467533 AOC3Q16853 763 aa13.89□□□□□ -0.19
HDAC3-203ENST00000467533 GRIPAP1Q4V328 841 aa13.89□□□□□ -0.19
HDAC3-203ENST00000467533 ZC3H15Q8WU90 426 aaKnown RBP13.89□□□□□ -0.19
HDAC3-203ENST00000467533 BCL2L13Q9BXK5 485 aa13.89□□□□□ -0.19
HDAC3-203ENST00000467533 PGAP2Q9UHJ9 254 aa13.89□□□□□ -0.19
HDAC3-203ENST00000467533 RIC1Q4ADV7 1423 aa13.89□□□□□ -0.19
HDAC3-203ENST00000467533 CDHR2Q9BYE9 1310 aa13.89□□□□□ -0.19
HDAC3-203ENST00000467533 PPEF1O14829 653 aaPredicted RBP13.88□□□□□ -0.19
HDAC3-203ENST00000467533 CRY2Q49AN0 593 aa13.88□□□□□ -0.19
HDAC3-203ENST00000467533 SLC51AQ86UW1 340 aa13.88□□□□□ -0.19
HDAC3-203ENST00000467533 TRPM4Q8TD43 1214 aa13.88□□□□□ -0.19
HDAC3-203ENST00000467533 ZNF157P51786 506 aaPredicted RBP13.87□□□□□ -0.19
HDAC3-203ENST00000467533 CXCL9Q07325 125 aa13.87□□□□□ -0.19
HDAC3-203ENST00000467533 USP48Q86UV5 1035 aa13.87□□□□□ -0.19
HDAC3-203ENST00000467533 CCDC102AQ96A19 550 aa13.87□□□□□ -0.19
HDAC3-203ENST00000467533 PANK3Q9H999 370 aa13.87□□□□□ -0.19
HDAC3-203ENST00000467533 HIRAP54198 1017 aaPredicted RBP13.86□□□□□ -0.19
HDAC3-203ENST00000467533 NUTM1Q86Y26 1132 aa13.86□□□□□ -0.19
HDAC3-203ENST00000467533 C2orf69Q8N8R5 385 aa13.86□□□□□ -0.19
HDAC3-203ENST00000467533 NYXQ9GZU5 481 aa13.86□□□□□ -0.19
HDAC3-203ENST00000467533 TMX4Q9H1E5 349 aaPredicted RBP13.86□□□□□ -0.19
HDAC3-203ENST00000467533 GBA2Q9HCG7 927 aaPredicted RBP13.86□□□□□ -0.19
HDAC3-203ENST00000467533 ZNRF3Q9ULT6 936 aa13.86□□□□□ -0.19
HDAC3-203ENST00000467533 USP16Q9Y5T5 823 aa13.86□□□□□ -0.19
HDAC3-203ENST00000467533 LAMB4A4D0S4 1761 aa13.86□□□□□ -0.19
HDAC3-203ENST00000467533 NUP98P52948 1817 aa13.85□□□□□ -0.19
HDAC3-203ENST00000467533 GNAT3A8MTJ3 354 aa13.85□□□□□ -0.19
HDAC3-203ENST00000467533 KCNQ3O43525 872 aa13.85□□□□□ -0.19
HDAC3-203ENST00000467533 PKN2Q16513 984 aaKnown RBP13.85□□□□□ -0.19
HDAC3-203ENST00000467533 DLK2Q6UY11 383 aa13.85□□□□□ -0.19
HDAC3-203ENST00000467533 IL17REQ8NFR9 667 aa13.85□□□□□ -0.19
HDAC3-203ENST00000467533 HDAC9Q9UKV0 1011 aa13.85□□□□□ -0.19
HDAC3-203ENST00000467533 PRAMEF22A3QJZ6 481 aa13.84□□□□□ -0.19
HDAC3-203ENST00000467533 BTBD11A6QL63 1104 aa13.84□□□□□ -0.19
HDAC3-203ENST00000467533 RGL2O15211 777 aa13.84□□□□□ -0.19
HDAC3-203ENST00000467533 HOXA10P31260 410 aaPredicted RBP13.84□□□□□ -0.19
HDAC3-203ENST00000467533 HLFQ16534 295 aa13.84□□□□□ -0.19
HDAC3-203ENST00000467533 RBM17Q96I25 401 aaKnown RBP13.84□□□□□ -0.19
HDAC3-203ENST00000467533 KIF7Q2M1P5 1343 aa13.84□□□□□ -0.19
HDAC3-203ENST00000467533 RAD17O75943 681 aa13.83□□□□□ -0.2
HDAC3-203ENST00000467533 SLC10A3P09131 477 aa13.83□□□□□ -0.2
HDAC3-203ENST00000467533 TNIP1Q15025 636 aa13.83□□□□□ -0.2
HDAC3-203ENST00000467533 SUPT20HQ8NEM7 779 aa13.83□□□□□ -0.2
HDAC3-203ENST00000467533 GAS2L2Q8NHY3 880 aa13.83□□□□□ -0.2
HDAC3-203ENST00000467533 VPS33BQ9H267 617 aa13.83□□□□□ -0.2
HDAC3-203ENST00000467533 SHTN1A0MZ66 631 aa13.82□□□□□ -0.2
HDAC3-203ENST00000467533 H7C1D1 291 aa13.82□□□□□ -0.2
HDAC3-203ENST00000467533 KRT26Q7Z3Y9 468 aa13.82□□□□□ -0.2
HDAC3-203ENST00000467533 CRAMP1Q96RY5 1269 aa13.82□□□□□ -0.2
HDAC3-203ENST00000467533 CSRNP1Q96S65 589 aa13.82□□□□□ -0.2
HDAC3-203ENST00000467533 CNOT7Q9UIV1 285 aaKnown RBP13.82□□□□□ -0.2
HDAC3-203ENST00000467533 POLR2AP24928 1970 aaKnown RBP13.82□□□□□ -0.2
HDAC3-203ENST00000467533 NBPF26B4DH59 902 aa13.81□□□□□ -0.2
HDAC3-203ENST00000467533 ADM5C9JUS6 153 aa13.81□□□□□ -0.2
HDAC3-203ENST00000467533 DIAPH1O60610 1272 aaKnown RBP13.81□□□□□ -0.2
HDAC3-203ENST00000467533 SNRPA1P09661 255 aaKnown RBP13.81□□□□□ -0.2
HDAC3-203ENST00000467533 FXR1P51114 621 aaKnown RBP eCLIP13.81□□□□□ -0.2
HDAC3-203ENST00000467533 NBPF10Q6P3W6 841 aaKnown RBP13.81□□□□□ -0.2
HDAC3-203ENST00000467533 MICALL2Q8IY33 904 aa13.81□□□□□ -0.2
HDAC3-203ENST00000467533 CEMIPQ8WUJ3 1361 aa13.81□□□□□ -0.2
HDAC3-203ENST00000467533 REM2Q8IYK8 340 aaPredicted RBP13.8□□□□□ -0.2
HDAC3-203ENST00000467533 ZNF296Q8WUU4 475 aaPredicted RBP13.8□□□□□ -0.2
HDAC3-203ENST00000467533 IBTKQ9P2D0 1353 aaPredicted RBP13.8□□□□□ -0.2
HDAC3-203ENST00000467533 GPTP24298 496 aa13.79□□□□□ -0.2
HDAC3-203ENST00000467533 TBC1D10BQ4KMP7 808 aaPredicted RBP13.79□□□□□ -0.2
HDAC3-203ENST00000467533 FBXO46Q6PJ61 603 aaPredicted RBP13.79□□□□□ -0.2
HDAC3-203ENST00000467533 DPP8Q6V1X1 898 aaPredicted RBP13.79□□□□□ -0.2
HDAC3-203ENST00000467533 DCPSQ96C86 337 aaKnown RBP13.79□□□□□ -0.2
HDAC3-203ENST00000467533 KNSTRNQ9Y448 316 aa13.79□□□□□ -0.2
HDAC3-203ENST00000467533 ATP6V0A2Q9Y487 856 aa13.79□□□□□ -0.2
HDAC3-203ENST00000467533 DDX60Q8IY21 1712 aaKnown RBP13.78□□□□□ -0.2
HDAC3-203ENST00000467533 LAMB2P55268 1798 aa13.78□□□□□ -0.2
HDAC3-203ENST00000467533 KIAA2012Q0VF49 1180 aa13.78□□□□□ -0.2
HDAC3-203ENST00000467533 SAMD7Q7Z3H4 446 aa13.78□□□□□ -0.2
HDAC3-203ENST00000467533 RASAL3Q86YV0 1011 aa13.78□□□□□ -0.2
HDAC3-203ENST00000467533 RTFDC1Q9BY42 306 aaPredicted RBP13.78□□□□□ -0.2
HDAC3-203ENST00000467533 RBBP6Q7Z6E9 1792 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms