RNA–Protein interactions for RNA: ENST00000467514.1

PRPF3-203, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 3

Gene PRPF3, Length 1,097 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-203ENST00000467514 CYP4F22Q6NT55 531 aa14.35□□□□□ -0.11
PRPF3-203ENST00000467514 GPC2Q8N158 579 aa14.35□□□□□ -0.11
PRPF3-203ENST00000467514 GPR101Q96P66 508 aaPredicted RBP14.35□□□□□ -0.11
PRPF3-203ENST00000467514 DDX21Q9NR30 783 aaKnown RBP eCLIP14.35□□□□□ -0.11
PRPF3-203ENST00000467514 TSKSQ9UJT2 592 aa14.35□□□□□ -0.11
PRPF3-203ENST00000467514 TRPM7Q96QT4 1865 aa14.34□□□□□ -0.11
PRPF3-203ENST00000467514 SYNE4Q8N205 404 aa14.34□□□□□ -0.11
PRPF3-203ENST00000467514 GNAT3A8MTJ3 354 aa14.33□□□□□ -0.12
PRPF3-203ENST00000467514 ALDH1B1P30837 517 aa14.33□□□□□ -0.12
PRPF3-203ENST00000467514 PIP4K2AP48426 406 aaPredicted RBP14.33□□□□□ -0.12
PRPF3-203ENST00000467514 CCDC27Q2M243 656 aa14.33□□□□□ -0.12
PRPF3-203ENST00000467514 OLFM4Q6UX06 510 aa14.33□□□□□ -0.12
PRPF3-203ENST00000467514 TPTE2Q6XPS3 522 aa14.33□□□□□ -0.12
PRPF3-203ENST00000467514 TRMT2AQ8IZ69 625 aaKnown RBP14.32□□□□□ -0.12
PRPF3-203ENST00000467514 GAS2L2Q8NHY3 880 aa14.32□□□□□ -0.12
PRPF3-203ENST00000467514 CDCA7LQ96GN5 454 aa14.32□□□□□ -0.12
PRPF3-203ENST00000467514 NIP7Q9Y221 180 aaKnown RBP eCLIP14.32□□□□□ -0.12
PRPF3-203ENST00000467514 SALL2Q9Y467 1007 aaPredicted RBP14.32□□□□□ -0.12
PRPF3-203ENST00000467514 THSD7BQ9C0I4 1608 aa14.32□□□□□ -0.12
PRPF3-203ENST00000467514 BTBD11A6QL63 1104 aa14.31□□□□□ -0.12
PRPF3-203ENST00000467514 FZD9O00144 591 aa14.31□□□□□ -0.12
PRPF3-203ENST00000467514 PNNQ9H307 717 aaKnown RBP14.31□□□□□ -0.12
PRPF3-203ENST00000467514 SIPA1L3O60292 1781 aaPredicted RBP14.31□□□□□ -0.12
PRPF3-203ENST00000467514 PRKAR2BP31323 418 aa14.3□□□□□ -0.12
PRPF3-203ENST00000467514 CLEC4GQ6UXB4 293 aa14.3□□□□□ -0.12
PRPF3-203ENST00000467514 WWC1Q8IX03 1113 aa14.3□□□□□ -0.12
PRPF3-203ENST00000467514 LARGE2Q8N3Y3 721 aa14.3□□□□□ -0.12
PRPF3-203ENST00000467514 C7orf43Q8WVR3 580 aa14.3□□□□□ -0.12
PRPF3-203ENST00000467514 AOC2O75106 756 aa14.29□□□□□ -0.12
PRPF3-203ENST00000467514 TMPOP42166 694 aaKnown RBP14.29□□□□□ -0.12
PRPF3-203ENST00000467514 SLFN5Q08AF3 891 aa14.29□□□□□ -0.12
PRPF3-203ENST00000467514 DGKZQ13574 1117 aa14.29□□□□□ -0.12
PRPF3-203ENST00000467514 RPGRQ92834 1020 aaKnown RBP14.29□□□□□ -0.12
PRPF3-203ENST00000467514 MCOLN1Q9GZU1 580 aa14.29□□□□□ -0.12
PRPF3-203ENST00000467514 TMX4Q9H1E5 349 aaPredicted RBP14.29□□□□□ -0.12
PRPF3-203ENST00000467514 GTF3C3Q9Y5Q9 886 aa14.29□□□□□ -0.12
PRPF3-203ENST00000467514 CASP8AP2Q9UKL3 1982 aa14.29□□□□□ -0.12
PRPF3-203ENST00000467514 TRAF5O00463 557 aa14.28□□□□□ -0.12
PRPF3-203ENST00000467514 CA12O43570 354 aa14.28□□□□□ -0.12
PRPF3-203ENST00000467514 RGS19P49795 217 aa14.28□□□□□ -0.12
PRPF3-203ENST00000467514 FMR1Q06787 632 aaKnown RBP eCLIP14.28□□□□□ -0.12
PRPF3-203ENST00000467514 GOLGA2Q08379 1002 aa14.28□□□□□ -0.12
PRPF3-203ENST00000467514 PHACTR3Q96KR7 559 aa14.28□□□□□ -0.12
PRPF3-203ENST00000467514 ZNF408Q9H9D4 720 aa14.28□□□□□ -0.12
PRPF3-203ENST00000467514 RRP7AQ9Y3A4 280 aaKnown RBP14.28□□□□□ -0.12
PRPF3-203ENST00000467514 TCERG1O14776 1098 aaKnown RBP14.27□□□□□ -0.13
PRPF3-203ENST00000467514 CELF2O95319 508 aaKnown RBP14.27□□□□□ -0.13
PRPF3-203ENST00000467514 MAP2K2P36507 400 aa14.27□□□□□ -0.13
PRPF3-203ENST00000467514 EPS15P42566 896 aa14.27□□□□□ -0.13
PRPF3-203ENST00000467514 DUSP27Q5VZP5 1158 aa14.27□□□□□ -0.13
PRPF3-203ENST00000467514 USP50Q70EL3 339 aaPredicted RBP14.27□□□□□ -0.13
PRPF3-203ENST00000467514 WDR63Q8IWG1 891 aa14.27□□□□□ -0.13
PRPF3-203ENST00000467514 NIM1KQ8IY84 436 aa14.27□□□□□ -0.13
PRPF3-203ENST00000467514 IL17REQ8NFR9 667 aa14.27□□□□□ -0.13
PRPF3-203ENST00000467514 PSMD1Q99460 953 aa14.27□□□□□ -0.13
PRPF3-203ENST00000467514 SPINK5Q9NQ38 1064 aaPredicted RBP14.27□□□□□ -0.13
PRPF3-203ENST00000467514 TRIM35Q9UPQ4 493 aa14.27□□□□□ -0.13
PRPF3-203ENST00000467514 TLL2Q9Y6L7 1015 aa14.27□□□□□ -0.13
PRPF3-203ENST00000467514 LTBP1Q14766 1721 aa14.27□□□□□ -0.13
PRPF3-203ENST00000467514 MAPK8IP3Q9UPT6 1336 aa14.26□□□□□ -0.13
PRPF3-203ENST00000467514 CC2D2BQ6DHV5 1058 aa14.26□□□□□ -0.13
PRPF3-203ENST00000467514 NYXQ9GZU5 481 aa14.26□□□□□ -0.13
PRPF3-203ENST00000467514 KCNQ3O43525 872 aa14.25□□□□□ -0.13
PRPF3-203ENST00000467514 SNRPA1P09661 255 aaKnown RBP14.25□□□□□ -0.13
PRPF3-203ENST00000467514 SCNN1DP51172 638 aa14.25□□□□□ -0.13
PRPF3-203ENST00000467514 NFE2L2Q16236 605 aa14.25□□□□□ -0.13
PRPF3-203ENST00000467514 RTF1Q92541 710 aaKnown RBP14.25□□□□□ -0.13
PRPF3-203ENST00000467514 USP16Q9Y5T5 823 aa14.25□□□□□ -0.13
PRPF3-203ENST00000467514 E9PSI1 815 aa14.24□□□□□ -0.13
PRPF3-203ENST00000467514 PPIP5K2O43314 1243 aa14.24□□□□□ -0.13
PRPF3-203ENST00000467514 ADARB2Q9NS39 739 aaKnown RBP14.24□□□□□ -0.13
PRPF3-203ENST00000467514 IL16Q14005 1332 aa14.23□□□□□ -0.13
PRPF3-203ENST00000467514 PRAMEF22A3QJZ6 481 aa14.23□□□□□ -0.13
PRPF3-203ENST00000467514 KLRG2A4D1S0 409 aaPredicted RBP14.23□□□□□ -0.13
PRPF3-203ENST00000467514 BRPF1P55201 1214 aaPredicted RBP14.23□□□□□ -0.13
PRPF3-203ENST00000467514 CST9Q5W186 159 aa14.23□□□□□ -0.13
PRPF3-203ENST00000467514 NUTM1Q86Y26 1132 aa14.23□□□□□ -0.13
PRPF3-203ENST00000467514 SUPT16HQ9Y5B9 1047 aaKnown RBP14.23□□□□□ -0.13
PRPF3-203ENST00000467514 PDE4DIPQ5VU43 2346 aa14.23□□□□□ -0.13
PRPF3-203ENST00000467514 PPEF1O14829 653 aaPredicted RBP14.22□□□□□ -0.13
PRPF3-203ENST00000467514 TNRC18O15417 2968 aaPredicted RBP14.22□□□□□ -0.13
PRPF3-203ENST00000467514 RIPK4P57078 832 aa14.22□□□□□ -0.13
PRPF3-203ENST00000467514 NEUROD2Q15784 382 aa14.22□□□□□ -0.13
PRPF3-203ENST00000467514 GRIPAP1Q4V328 841 aa14.22□□□□□ -0.13
PRPF3-203ENST00000467514 CIAPIN1Q6FI81 312 aa14.22□□□□□ -0.13
PRPF3-203ENST00000467514 RBM17Q96I25 401 aaKnown RBP14.22□□□□□ -0.13
PRPF3-203ENST00000467514 BCL2L13Q9BXK5 485 aa14.22□□□□□ -0.13
PRPF3-203ENST00000467514 COL4A5P29400 1685 aa14.21□□□□□ -0.13
PRPF3-203ENST00000467514 KIF6Q6ZMV9 814 aa14.21□□□□□ -0.13
PRPF3-203ENST00000467514 SAPCD2Q86UD0 394 aa14.21□□□□□ -0.13
PRPF3-203ENST00000467514 ABCC12Q96J65 1359 aa14.21□□□□□ -0.14
PRPF3-203ENST00000467514 SOX10P56693 466 aa14.2□□□□□ -0.14
PRPF3-203ENST00000467514 HLFQ16534 295 aa14.2□□□□□ -0.14
PRPF3-203ENST00000467514 AOC3Q16853 763 aa14.2□□□□□ -0.14
PRPF3-203ENST00000467514 GLIS2Q9BZE0 524 aaPredicted RBP14.2□□□□□ -0.14
PRPF3-203ENST00000467514 GPRC5DQ9NZD1 345 aa14.2□□□□□ -0.14
PRPF3-203ENST00000467514 CEMIPQ8WUJ3 1361 aa14.2□□□□□ -0.14
PRPF3-203ENST00000467514 LAMB4A4D0S4 1761 aa14.19□□□□□ -0.14
PRPF3-203ENST00000467514 NEFMP07197 916 aa14.19□□□□□ -0.14
PRPF3-203ENST00000467514 GPTP24298 496 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 195.1 ms