RNA–Protein interactions for RNA: ENST00000467288.6

GMDS-203, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 5

Gene GMDS, Length 900 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-203ENST00000467288 C8orf58Q8NAV2 365 aa25.19■■□□□ 1.62
GMDS-203ENST00000467288 HYPKQ9NX55 129 aa25.19■■□□□ 1.62
GMDS-203ENST00000467288 ZNF219Q9P2Y4 722 aaPredicted RBP25.19■■□□□ 1.62
GMDS-203ENST00000467288 FSTL1Q12841 308 aa25.18■■□□□ 1.62
GMDS-203ENST00000467288 C7orf43Q8WVR3 580 aa25.18■■□□□ 1.62
GMDS-203ENST00000467288 ELL2O00472 640 aaPredicted RBP25.17■■□□□ 1.62
GMDS-203ENST00000467288 TCIRG1Q13488 830 aa25.17■■□□□ 1.62
GMDS-203ENST00000467288 PLBD2Q8NHP8 589 aa25.17■■□□□ 1.62
GMDS-203ENST00000467288 ANKRD36CQ5JPF3 1778 aa25.17■■□□□ 1.62
GMDS-203ENST00000467288 IL16Q14005 1332 aa25.16■■□□□ 1.62
GMDS-203ENST00000467288 HTRA3P83110 453 aa25.16■■□□□ 1.62
GMDS-203ENST00000467288 CACNA1SQ13698 1873 aa25.16■■□□□ 1.62
GMDS-203ENST00000467288 FER1L6Q2WGJ9 1857 aa25.16■■□□□ 1.62
GMDS-203ENST00000467288 SOGA3Q5TF21 947 aa25.16■■□□□ 1.62
GMDS-203ENST00000467288 ANKRD13DQ6ZTN6 518 aa25.16■■□□□ 1.62
GMDS-203ENST00000467288 UTP14AQ9BVJ6 771 aaKnown RBP25.16■■□□□ 1.62
GMDS-203ENST00000467288 RNF123Q5XPI4 1314 aa25.15■■□□□ 1.62
GMDS-203ENST00000467288 LTBP3Q9NS15 1303 aa25.15■■□□□ 1.62
GMDS-203ENST00000467288 ZC3H4Q9UPT8 1303 aaKnown RBP25.15■■□□□ 1.62
GMDS-203ENST00000467288 ALDH1B1P30837 517 aa25.15■■□□□ 1.62
GMDS-203ENST00000467288 SLC10A5Q5PT55 438 aa25.15■■□□□ 1.62
GMDS-203ENST00000467288 NLRP10Q86W26 655 aa25.15■■□□□ 1.62
GMDS-203ENST00000467288 TSR2Q969E8 191 aaKnown RBP25.14■■□□□ 1.62
GMDS-203ENST00000467288 GLTPD2A6NH11 291 aa25.13■■□□□ 1.61
GMDS-203ENST00000467288 HOXA10P31260 410 aaPredicted RBP25.13■■□□□ 1.61
GMDS-203ENST00000467288 TSPYL6Q8N831 410 aa25.13■■□□□ 1.61
GMDS-203ENST00000467288 CHMP4AQ9BY43 222 aa25.13■■□□□ 1.61
GMDS-203ENST00000467288 FAM9BQ8IZU0 186 aa25.12■■□□□ 1.61
GMDS-203ENST00000467288 TAOK3Q9H2K8 898 aa25.12■■□□□ 1.61
GMDS-203ENST00000467288 CCDC93Q567U6 631 aa25.11■■□□□ 1.61
GMDS-203ENST00000467288 CCDC30Q5VVM6 783 aa25.11■■□□□ 1.61
GMDS-203ENST00000467288 ISCA1Q9BUE6 129 aa25.11■■□□□ 1.61
GMDS-203ENST00000467288 CCDC88AQ3V6T2 1871 aa25.11■■□□□ 1.61
GMDS-203ENST00000467288 VEGFAP15692 232 aaPredicted RBP25.1■■□□□ 1.61
GMDS-203ENST00000467288 C3orf67Q6ZVT6 689 aa25.1■■□□□ 1.61
GMDS-203ENST00000467288 WDR63Q8IWG1 891 aa25.1■■□□□ 1.61
GMDS-203ENST00000467288 RPGRQ92834 1020 aaKnown RBP25.1■■□□□ 1.61
GMDS-203ENST00000467288 NLRP3Q96P20 1036 aa25.1■■□□□ 1.61
GMDS-203ENST00000467288 PHAXQ9H814 394 aaKnown RBP25.1■■□□□ 1.61
GMDS-203ENST00000467288 SMC1BQ8NDV3 1235 aa25.09■■□□□ 1.61
GMDS-203ENST00000467288 CRAMP1Q96RY5 1269 aa25.09■■□□□ 1.61
GMDS-203ENST00000467288 SALL2Q9Y467 1007 aaPredicted RBP25.09■■□□□ 1.61
GMDS-203ENST00000467288 KLRG1Q96E93 195 aa25.08■■□□□ 1.61
GMDS-203ENST00000467288 TRMT112Q9UI30 125 aaKnown RBP25.08■■□□□ 1.61
GMDS-203ENST00000467288 SH3TC1Q8TE82 1336 aa25.08■■□□□ 1.6
GMDS-203ENST00000467288 GOLGA2Q08379 1002 aa25.07■■□□□ 1.6
GMDS-203ENST00000467288 TRIM28Q13263 835 aaKnown RBP25.07■■□□□ 1.6
GMDS-203ENST00000467288 OLFM4Q6UX06 510 aa25.07■■□□□ 1.6
GMDS-203ENST00000467288 RBM17Q96I25 401 aaKnown RBP25.07■■□□□ 1.6
GMDS-203ENST00000467288 TIAM2Q8IVF5 1701 aa25.06■■□□□ 1.6
GMDS-203ENST00000467288 TWISTNBQ3B726 338 aaPredicted RBP25.06■■□□□ 1.6
GMDS-203ENST00000467288 RTKN2Q8IZC4 609 aa25.06■■□□□ 1.6
GMDS-203ENST00000467288 SYNE4Q8N205 404 aa25.06■■□□□ 1.6
GMDS-203ENST00000467288 DICER1Q9UPY3 1922 aaKnown RBP25.06■■□□□ 1.6
GMDS-203ENST00000467288 SNED1Q8TER0 1413 aa25.05■■□□□ 1.6
GMDS-203ENST00000467288 ATP5J2-PTCD1G3V325 749 aa25.05■■□□□ 1.6
GMDS-203ENST00000467288 FKBP4Q02790 459 aaKnown RBP eCLIP25.05■■□□□ 1.6
GMDS-203ENST00000467288 CC2D2BQ6DHV5 1058 aa25.05■■□□□ 1.6
GMDS-203ENST00000467288 RIC3Q7Z5B4 369 aa25.05■■□□□ 1.6
GMDS-203ENST00000467288 FANCIQ9NVI1 1328 aa25.05■■□□□ 1.6
GMDS-203ENST00000467288 HCLS1P14317 486 aaPredicted RBP25.04■■□□□ 1.6
GMDS-203ENST00000467288 DPY19L2Q6NUT2 758 aa25.04■■□□□ 1.6
GMDS-203ENST00000467288 POTECB2RU33 542 aa25.03■■□□□ 1.6
GMDS-203ENST00000467288 JMYQ8N9B5 988 aa25.02■■□□□ 1.6
GMDS-203ENST00000467288 LAMB2P55268 1798 aa25.01■■□□□ 1.59
GMDS-203ENST00000467288 DDX58O95786 925 aaKnown RBP25.01■■□□□ 1.59
GMDS-203ENST00000467288 ZNF428Q96B54 188 aa25.01■■□□□ 1.59
GMDS-203ENST00000467288 STK31Q9BXU1 1019 aa25.01■■□□□ 1.59
GMDS-203ENST00000467288 PPEF1O14829 653 aaPredicted RBP25■■□□□ 1.59
GMDS-203ENST00000467288 GRIPAP1Q4V328 841 aa25■■□□□ 1.59
GMDS-203ENST00000467288 FAM89AQ96GI7 184 aa25■■□□□ 1.59
GMDS-203ENST00000467288 PSMD1Q99460 953 aa25■■□□□ 1.59
GMDS-203ENST00000467288 SPINK5Q9NQ38 1064 aaPredicted RBP25■■□□□ 1.59
GMDS-203ENST00000467288 ABCC4O15439 1325 aa25■■□□□ 1.59
GMDS-203ENST00000467288 TCERG1O14776 1098 aaKnown RBP24.99■■□□□ 1.59
GMDS-203ENST00000467288 MYD88Q99836 296 aa24.99■■□□□ 1.59
GMDS-203ENST00000467288 METTL22Q9BUU2 404 aaPredicted RBP24.99■■□□□ 1.59
GMDS-203ENST00000467288 ZNF277Q9NRM2 450 aaPredicted RBP24.99■■□□□ 1.59
GMDS-203ENST00000467288 DDX60Q8IY21 1712 aaKnown RBP24.98■■□□□ 1.59
GMDS-203ENST00000467288 ZNF521Q96K83 1311 aa24.97■■□□□ 1.59
GMDS-203ENST00000467288 VAMP4O75379 141 aa24.97■■□□□ 1.59
GMDS-203ENST00000467288 EXOSC9Q06265 439 aaKnown RBP24.97■■□□□ 1.59
GMDS-203ENST00000467288 KSR2Q6VAB6 950 aa24.97■■□□□ 1.59
GMDS-203ENST00000467288 SLC51AQ86UW1 340 aa24.97■■□□□ 1.59
GMDS-203ENST00000467288 CCDC191Q8NCU4 936 aa24.97■■□□□ 1.59
GMDS-203ENST00000467288 BBOX1O75936 387 aa24.96■■□□□ 1.59
GMDS-203ENST00000467288 SLC4A2P04920 1241 aa24.96■■□□□ 1.59
GMDS-203ENST00000467288 IARSP41252 1262 aaKnown RBP24.96■■□□□ 1.59
GMDS-203ENST00000467288 SF3B3Q15393 1217 aaKnown RBP24.96■■□□□ 1.59
GMDS-203ENST00000467288 DDX46Q7L014 1031 aaKnown RBP24.96■■□□□ 1.59
GMDS-203ENST00000467288 G2E3Q7L622 706 aa24.96■■□□□ 1.59
GMDS-203ENST00000467288 ZBTB38Q8NAP3 1195 aaPredicted RBP24.96■■□□□ 1.59
GMDS-203ENST00000467288 MAP3K2Q9Y2U5 619 aa24.96■■□□□ 1.59
GMDS-203ENST00000467288 ATP6V0A2Q9Y487 856 aa24.96■■□□□ 1.59
GMDS-203ENST00000467288 PI4KAP2A4QPH2 592 aa24.95■■□□□ 1.58
GMDS-203ENST00000467288 PI4KAP1Q8N8J0 262 aa24.95■■□□□ 1.58
GMDS-203ENST00000467288 MYH16Q9H6N6 1097 aa24.95■■□□□ 1.58
GMDS-203ENST00000467288 WDR90Q96KV7 1748 aa24.95■■□□□ 1.58
GMDS-203ENST00000467288 IRS4O14654 1257 aaPredicted RBP24.94■■□□□ 1.58
GMDS-203ENST00000467288 DDNO94850 711 aaPredicted RBP24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms