RNA–Protein interactions for RNA: ENST00000466982.1

SFXN3-204, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,756 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-204ENST00000466982 NEK11Q8NG66 645 aa13.01□□□□□ -0.33
SFXN3-204ENST00000466982 DRC1Q96MC2 740 aa13.01□□□□□ -0.33
SFXN3-204ENST00000466982 LRRCC1Q9C099 1032 aa13.01□□□□□ -0.33
SFXN3-204ENST00000466982 TNMDQ9H2S6 317 aa13.01□□□□□ -0.33
SFXN3-204ENST00000466982 NYAP1Q6ZVC0 841 aa13.01□□□□□ -0.33
SFXN3-204ENST00000466982 TFIP11Q9UBB9 837 aaKnown RBP13.01□□□□□ -0.33
SFXN3-204ENST00000466982 NPATQ14207 1427 aa13.01□□□□□ -0.33
SFXN3-204ENST00000466982 KIAA0232Q92628 1395 aa13□□□□□ -0.33
SFXN3-204ENST00000466982 SLC4A2P04920 1241 aa13□□□□□ -0.33
SFXN3-204ENST00000466982 ZNF165P49910 485 aa13□□□□□ -0.33
SFXN3-204ENST00000466982 GSCP56915 257 aaPredicted RBP13□□□□□ -0.33
SFXN3-204ENST00000466982 NECAB1Q8N987 351 aa13□□□□□ -0.33
SFXN3-204ENST00000466982 IL17RAQ96F46 866 aa13□□□□□ -0.33
SFXN3-204ENST00000466982 ERO1AQ96HE7 468 aa13□□□□□ -0.33
SFXN3-204ENST00000466982 IL1RAPL2Q9NP60 686 aa13□□□□□ -0.33
SFXN3-204ENST00000466982 ZKSCAN7Q9P0L1 754 aaPredicted RBP13□□□□□ -0.33
SFXN3-204ENST00000466982 FHOD1Q9Y613 1164 aa13□□□□□ -0.33
SFXN3-204ENST00000466982 EFCAB6Q5THR3 1501 aa13□□□□□ -0.33
SFXN3-204ENST00000466982 LMTK2Q8IWU2 1503 aa13□□□□□ -0.33
SFXN3-204ENST00000466982 CD163L1Q9NR16 1453 aa13□□□□□ -0.33
SFXN3-204ENST00000466982 TRIM66O15016 1216 aa13□□□□□ -0.33
SFXN3-204ENST00000466982 POLR3GO15318 223 aaPredicted RBP13□□□□□ -0.33
SFXN3-204ENST00000466982 SKILP12757 684 aa13□□□□□ -0.33
SFXN3-204ENST00000466982 TSGA10IPQ3SY00 556 aa13□□□□□ -0.33
SFXN3-204ENST00000466982 PSMD1Q99460 953 aa13□□□□□ -0.33
SFXN3-204ENST00000466982 CABP1Q9NZU7 370 aa13□□□□□ -0.33
SFXN3-204ENST00000466982 PPP6R1Q9UPN7 881 aa13□□□□□ -0.33
SFXN3-204ENST00000466982 USP16Q9Y5T5 823 aa13□□□□□ -0.33
SFXN3-204ENST00000466982 RIMS2Q9UQ26 1411 aa12.99□□□□□ -0.33
SFXN3-204ENST00000466982 ST3GAL1Q11201 340 aa12.99□□□□□ -0.33
SFXN3-204ENST00000466982 SYT10Q6XYQ8 523 aa12.99□□□□□ -0.33
SFXN3-204ENST00000466982 CCDC91Q7Z6B0 441 aa12.99□□□□□ -0.33
SFXN3-204ENST00000466982 SPG7Q9UQ90 795 aa12.99□□□□□ -0.33
SFXN3-204ENST00000466982 CAMSAP1Q5T5Y3 1602 aa12.99□□□□□ -0.33
SFXN3-204ENST00000466982 A0A087WWV3 80 aa12.99□□□□□ -0.33
SFXN3-204ENST00000466982 ATP2B1P20020 1258 aa12.99□□□□□ -0.33
SFXN3-204ENST00000466982 CASTP20810 708 aaKnown RBP12.99□□□□□ -0.33
SFXN3-204ENST00000466982 SSR1P43307 286 aaKnown RBP12.99□□□□□ -0.33
SFXN3-204ENST00000466982 FILIP1Q7Z7B0 1213 aa12.99□□□□□ -0.33
SFXN3-204ENST00000466982 NUTM1Q86Y26 1132 aa12.99□□□□□ -0.33
SFXN3-204ENST00000466982 SLU7O95391 586 aaKnown RBP12.98□□□□□ -0.33
SFXN3-204ENST00000466982 IL13P35225 146 aa12.98□□□□□ -0.33
SFXN3-204ENST00000466982 PLA2G4AP47712 749 aa12.98□□□□□ -0.33
SFXN3-204ENST00000466982 CLCN6P51797 869 aa12.98□□□□□ -0.33
SFXN3-204ENST00000466982 BORCS6Q96GS4 357 aa12.98□□□□□ -0.33
SFXN3-204ENST00000466982 MIS18AQ9NYP9 233 aa12.98□□□□□ -0.33
SFXN3-204ENST00000466982 SART3Q15020 963 aaKnown RBP12.98□□□□□ -0.33
SFXN3-204ENST00000466982 CDC37L1Q7L3B6 337 aa12.98□□□□□ -0.33
SFXN3-204ENST00000466982 MCM10Q7L590 875 aa12.98□□□□□ -0.33
SFXN3-204ENST00000466982 GOLGA6L1Q8N7Z2 621 aa12.98□□□□□ -0.33
SFXN3-204ENST00000466982 TDRD7Q8NHU6 1098 aaKnown RBP12.98□□□□□ -0.33
SFXN3-204ENST00000466982 ATG3Q9NT62 314 aa12.98□□□□□ -0.33
SFXN3-204ENST00000466982 BSDC1Q9NW68 430 aaPredicted RBP12.98□□□□□ -0.33
SFXN3-204ENST00000466982 HYPKQ9NX55 129 aa12.98□□□□□ -0.33
SFXN3-204ENST00000466982 SSH2Q76I76 1423 aa12.98□□□□□ -0.33
SFXN3-204ENST00000466982 ADGRB3O60242 1522 aa12.98□□□□□ -0.33
SFXN3-204ENST00000466982 PPP1R12AO14974 1030 aaPredicted RBP12.98□□□□□ -0.33
SFXN3-204ENST00000466982 NR1I2O75469 434 aa12.98□□□□□ -0.33
SFXN3-204ENST00000466982 COL9A3Q14050 684 aaPredicted RBP12.98□□□□□ -0.33
SFXN3-204ENST00000466982 BMS1Q14692 1282 aaKnown RBP12.98□□□□□ -0.33
SFXN3-204ENST00000466982 ZKSCAN8Q15776 578 aaPredicted RBP12.98□□□□□ -0.33
SFXN3-204ENST00000466982 ADCK5Q3MIX3 580 aa12.98□□□□□ -0.33
SFXN3-204ENST00000466982 H2AFXP16104 143 aaPredicted RBP12.97□□□□□ -0.33
SFXN3-204ENST00000466982 CEBPAP49715 358 aaPredicted RBP12.97□□□□□ -0.33
SFXN3-204ENST00000466982 ST5P78524 1137 aa12.97□□□□□ -0.33
SFXN3-204ENST00000466982 LRCH2Q5VUJ6 765 aa12.97□□□□□ -0.33
SFXN3-204ENST00000466982 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.97□□□□□ -0.33
SFXN3-204ENST00000466982 ZCCHC17Q9NP64 241 aaKnown RBP12.97□□□□□ -0.33
SFXN3-204ENST00000466982 ZRANB1Q9UGI0 708 aa12.97□□□□□ -0.33
SFXN3-204ENST00000466982 CCDC171Q6TFL3 1326 aa12.97□□□□□ -0.33
SFXN3-204ENST00000466982 DLG5Q8TDM6 1919 aa12.97□□□□□ -0.33
SFXN3-204ENST00000466982 PNMA6AP0CW24 399 aaPredicted RBP12.97□□□□□ -0.33
SFXN3-204ENST00000466982 ARHGEF28Q8N1W1 1705 aaKnown RBP12.97□□□□□ -0.33
SFXN3-204ENST00000466982 CALR3Q96L12 384 aaKnown RBP12.97□□□□□ -0.33
SFXN3-204ENST00000466982 DEF6Q9H4E7 631 aa12.97□□□□□ -0.33
SFXN3-204ENST00000466982 CLTCQ00610 1675 aaKnown RBP12.96□□□□□ -0.33
SFXN3-204ENST00000466982 CCDC69A6NI79 296 aa12.96□□□□□ -0.33
SFXN3-204ENST00000466982 CCZ1BP86790 482 aa12.96□□□□□ -0.33
SFXN3-204ENST00000466982 CCZ1P86791 482 aaPredicted RBP12.96□□□□□ -0.33
SFXN3-204ENST00000466982 SLFNL1Q499Z3 407 aa12.96□□□□□ -0.33
SFXN3-204ENST00000466982 NBPF6Q5VWK0 638 aa12.96□□□□□ -0.33
SFXN3-204ENST00000466982 NBPF5PQ86XG9 351 aaPredicted RBP12.96□□□□□ -0.33
SFXN3-204ENST00000466982 OTUD6BQ8N6M0 293 aa12.96□□□□□ -0.33
SFXN3-204ENST00000466982 FAM212AQ96EL1 285 aa12.96□□□□□ -0.33
SFXN3-204ENST00000466982 NBPF4Q96M43 638 aa12.96□□□□□ -0.33
SFXN3-204ENST00000466982 LSG1Q9H089 658 aaKnown RBP12.96□□□□□ -0.33
SFXN3-204ENST00000466982 LCMT1Q9UIC8 334 aa12.96□□□□□ -0.33
SFXN3-204ENST00000466982 PTPRCP08575 1304 aa12.96□□□□□ -0.33
SFXN3-204ENST00000466982 TUBGCP6Q96RT7 1819 aa12.96□□□□□ -0.33
SFXN3-204ENST00000466982 A0A1B0GUL7 405 aa12.96□□□□□ -0.34
SFXN3-204ENST00000466982 KRT85P78386 507 aa12.96□□□□□ -0.34
SFXN3-204ENST00000466982 ME3Q16798 604 aa12.96□□□□□ -0.34
SFXN3-204ENST00000466982 CWC27Q6UX04 472 aaKnown RBP12.96□□□□□ -0.34
SFXN3-204ENST00000466982 HDGFL2Q7Z4V5 671 aaPredicted RBP12.96□□□□□ -0.34
SFXN3-204ENST00000466982 CCAR2Q8N163 923 aaKnown RBP12.96□□□□□ -0.34
SFXN3-204ENST00000466982 PPLO60437 1756 aa12.95□□□□□ -0.34
SFXN3-204ENST00000466982 SGSM2O43147 1006 aa12.95□□□□□ -0.34
SFXN3-204ENST00000466982 GNAI2P04899 355 aa12.95□□□□□ -0.34
SFXN3-204ENST00000466982 LARP1BQ659C4 914 aaKnown RBP12.95□□□□□ -0.34
SFXN3-204ENST00000466982 PRAM1Q96QH2 718 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms