RNA–Protein interactions for RNA: ENST00000466959.1

PDCD11-202, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 500 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-202ENST00000466959 IGKV5-2P06315 115 aa16.77■□□□□ 0.28
PDCD11-202ENST00000466959 GYS1P13807 737 aa16.77■□□□□ 0.28
PDCD11-202ENST00000466959 NEURL1BA8MQ27 555 aa16.76■□□□□ 0.27
PDCD11-202ENST00000466959 TRIM28Q13263 835 aaKnown RBP16.76■□□□□ 0.27
PDCD11-202ENST00000466959 ZNF34Q8IZ26 560 aa16.76■□□□□ 0.27
PDCD11-202ENST00000466959 ATP5J2-PTCD1G3V325 749 aa16.75■□□□□ 0.27
PDCD11-202ENST00000466959 FKBP8Q14318 412 aa16.75■□□□□ 0.27
PDCD11-202ENST00000466959 MVPQ14764 893 aaKnown RBP16.75■□□□□ 0.27
PDCD11-202ENST00000466959 CWF19L2Q2TBE0 894 aaKnown RBP16.75■□□□□ 0.27
PDCD11-202ENST00000466959 ITPRIPQ8IWB1 547 aa16.75■□□□□ 0.27
PDCD11-202ENST00000466959 CCDC191Q8NCU4 936 aa16.75■□□□□ 0.27
PDCD11-202ENST00000466959 COG6Q9Y2V7 657 aa16.75■□□□□ 0.27
PDCD11-202ENST00000466959 CEP350Q5VT06 3117 aa16.74■□□□□ 0.27
PDCD11-202ENST00000466959 GPTP24298 496 aa16.74■□□□□ 0.27
PDCD11-202ENST00000466959 PARP10Q53GL7 1025 aa16.74■□□□□ 0.27
PDCD11-202ENST00000466959 TBC1D9BQ66K14 1250 aa16.74■□□□□ 0.27
PDCD11-202ENST00000466959 CWC25Q9NXE8 425 aaPredicted RBP16.74■□□□□ 0.27
PDCD11-202ENST00000466959 NIP7Q9Y221 180 aaKnown RBP eCLIP16.74■□□□□ 0.27
PDCD11-202ENST00000466959 UBN2Q6ZU65 1347 aa16.73■□□□□ 0.27
PDCD11-202ENST00000466959 GCKRQ14397 625 aa16.73■□□□□ 0.27
PDCD11-202ENST00000466959 NLRP10Q86W26 655 aa16.73■□□□□ 0.27
PDCD11-202ENST00000466959 NLGN1Q8N2Q7 840 aa16.73■□□□□ 0.27
PDCD11-202ENST00000466959 CRBNQ96SW2 442 aa16.73■□□□□ 0.27
PDCD11-202ENST00000466959 GPBP1L1Q9HC44 474 aaPredicted RBP16.73■□□□□ 0.27
PDCD11-202ENST00000466959 DDX19BQ9UMR2 479 aa16.73■□□□□ 0.27
PDCD11-202ENST00000466959 NEFLP07196 543 aa16.72■□□□□ 0.27
PDCD11-202ENST00000466959 IRX6P78412 446 aaPredicted RBP16.72■□□□□ 0.27
PDCD11-202ENST00000466959 NLGN2Q8NFZ4 835 aa16.72■□□□□ 0.27
PDCD11-202ENST00000466959 SETDB2Q96T68 719 aa16.72■□□□□ 0.27
PDCD11-202ENST00000466959 LAMB2P55268 1798 aa16.72■□□□□ 0.27
PDCD11-202ENST00000466959 TM4SF1P30408 202 aa16.71■□□□□ 0.27
PDCD11-202ENST00000466959 NFIXQ14938 502 aa16.71■□□□□ 0.27
PDCD11-202ENST00000466959 BICDL1Q6ZP65 573 aa16.71■□□□□ 0.27
PDCD11-202ENST00000466959 CARMIL3Q8ND23 1372 aa16.71■□□□□ 0.27
PDCD11-202ENST00000466959 NRXN2Q9P2S2 1712 aa16.7■□□□□ 0.26
PDCD11-202ENST00000466959 GRM8O00222 908 aa16.7■□□□□ 0.26
PDCD11-202ENST00000466959 SUSD4Q5VX71 490 aa16.7■□□□□ 0.26
PDCD11-202ENST00000466959 PPP1R42Q7Z4L9 355 aa16.7■□□□□ 0.26
PDCD11-202ENST00000466959 USP44Q9H0E7 712 aa16.7■□□□□ 0.26
PDCD11-202ENST00000466959 CHMP4BQ9H444 224 aaKnown RBP16.7■□□□□ 0.26
PDCD11-202ENST00000466959 C9orf78Q9NZ63 289 aaPredicted RBP16.7■□□□□ 0.26
PDCD11-202ENST00000466959 UTYO14607 1347 aa16.7■□□□□ 0.26
PDCD11-202ENST00000466959 ZBTB7BO15156 539 aaPredicted RBP16.69■□□□□ 0.26
PDCD11-202ENST00000466959 NTSR2O95665 410 aa16.69■□□□□ 0.26
PDCD11-202ENST00000466959 PCCAP05165 728 aaPredicted RBP16.69■□□□□ 0.26
PDCD11-202ENST00000466959 GNAI3P08754 354 aa16.69■□□□□ 0.26
PDCD11-202ENST00000466959 HSPA6P17066 643 aa16.69■□□□□ 0.26
PDCD11-202ENST00000466959 MSL1Q68DK7 614 aa16.69■□□□□ 0.26
PDCD11-202ENST00000466959 MEIS3Q99687 375 aa16.69■□□□□ 0.26
PDCD11-202ENST00000466959 UTP14AQ9BVJ6 771 aaKnown RBP16.69■□□□□ 0.26
PDCD11-202ENST00000466959 DDX60Q8IY21 1712 aaKnown RBP16.68■□□□□ 0.26
PDCD11-202ENST00000466959 H7C1W4 665 aa16.68■□□□□ 0.26
PDCD11-202ENST00000466959 DDR1Q08345 913 aa16.68■□□□□ 0.26
PDCD11-202ENST00000466959 ZBTB38Q8NAP3 1195 aaPredicted RBP16.68■□□□□ 0.26
PDCD11-202ENST00000466959 EXOC6Q8TAG9 804 aa16.68■□□□□ 0.26
PDCD11-202ENST00000466959 NYXQ9GZU5 481 aa16.68■□□□□ 0.26
PDCD11-202ENST00000466959 TRMT112Q9UI30 125 aaKnown RBP16.68■□□□□ 0.26
PDCD11-202ENST00000466959 MYH3P11055 1940 aa16.67■□□□□ 0.26
PDCD11-202ENST00000466959 FAM177BA6PVY3 158 aa16.67■□□□□ 0.26
PDCD11-202ENST00000466959 POLRMTO00411 1230 aaKnown RBP16.67■□□□□ 0.26
PDCD11-202ENST00000466959 MMP10P09238 476 aa16.67■□□□□ 0.26
PDCD11-202ENST00000466959 UBTFL1P0CB47 393 aaPredicted RBP16.67■□□□□ 0.26
PDCD11-202ENST00000466959 YBX3P16989 372 aaKnown RBP eCLIP16.67■□□□□ 0.26
PDCD11-202ENST00000466959 CASP7P55210 303 aa16.67■□□□□ 0.26
PDCD11-202ENST00000466959 UBE3BQ7Z3V4 1068 aa16.67■□□□□ 0.26
PDCD11-202ENST00000466959 NBPF5PQ86XG9 351 aaPredicted RBP16.67■□□□□ 0.26
PDCD11-202ENST00000466959 CDHR2Q9BYE9 1310 aa16.67■□□□□ 0.26
PDCD11-202ENST00000466959 NBPF7P0C2Y1 421 aaPredicted RBP16.66■□□□□ 0.26
PDCD11-202ENST00000466959 ZBTB40Q9NUA8 1239 aa16.66■□□□□ 0.26
PDCD11-202ENST00000466959 HDAC5Q9UQL6 1122 aa16.66■□□□□ 0.26
PDCD11-202ENST00000466959 SH3TC1Q8TE82 1336 aa16.66■□□□□ 0.26
PDCD11-202ENST00000466959 SERPINB2P05120 415 aa16.65■□□□□ 0.26
PDCD11-202ENST00000466959 AAMPQ13685 434 aa16.65■□□□□ 0.26
PDCD11-202ENST00000466959 TPTE2Q6XPS3 522 aa16.65■□□□□ 0.26
PDCD11-202ENST00000466959 JARID2Q92833 1246 aaPredicted RBP16.65■□□□□ 0.26
PDCD11-202ENST00000466959 FAM89AQ96GI7 184 aa16.65■□□□□ 0.26
PDCD11-202ENST00000466959 PARP3Q9Y6F1 533 aa16.65■□□□□ 0.26
PDCD11-202ENST00000466959 GNAI2P04899 355 aa16.64■□□□□ 0.25
PDCD11-202ENST00000466959 CNBD1Q8NA66 436 aa16.64■□□□□ 0.25
PDCD11-202ENST00000466959 ZNF526Q8TF50 670 aaPredicted RBP16.64■□□□□ 0.25
PDCD11-202ENST00000466959 RIC1Q4ADV7 1423 aa16.63■□□□□ 0.25
PDCD11-202ENST00000466959 IRS4O14654 1257 aaPredicted RBP16.63■□□□□ 0.25
PDCD11-202ENST00000466959 HSP90B1P14625 803 aaKnown RBP16.63■□□□□ 0.25
PDCD11-202ENST00000466959 GTF2E1P29083 439 aaPredicted RBP16.63■□□□□ 0.25
PDCD11-202ENST00000466959 ERFEQ4G0M1 354 aa16.63■□□□□ 0.25
PDCD11-202ENST00000466959 RTL5Q5HYW3 569 aaPredicted RBP16.63■□□□□ 0.25
PDCD11-202ENST00000466959 PRR5LQ6MZQ0 368 aa16.63■□□□□ 0.25
PDCD11-202ENST00000466959 NUTM1Q86Y26 1132 aa16.63■□□□□ 0.25
PDCD11-202ENST00000466959 SYNE4Q8N205 404 aa16.63■□□□□ 0.25
PDCD11-202ENST00000466959 SUCLG2Q96I99 432 aa16.63■□□□□ 0.25
PDCD11-202ENST00000466959 LRRFIP2Q9Y608 721 aaKnown RBP16.63■□□□□ 0.25
PDCD11-202ENST00000466959 ANKRD31Q8N7Z5 1873 aa16.63■□□□□ 0.25
PDCD11-202ENST00000466959 ABCC12Q96J65 1359 aa16.63■□□□□ 0.25
PDCD11-202ENST00000466959 TNRC6CQ9HCJ0 1690 aaKnown RBP16.62■□□□□ 0.25
PDCD11-202ENST00000466959 GOLGB1Q14789 3259 aaKnown RBP16.62■□□□□ 0.25
PDCD11-202ENST00000466959 NPHP1O15259 732 aa16.62■□□□□ 0.25
PDCD11-202ENST00000466959 SLC10A5Q5PT55 438 aa16.62■□□□□ 0.25
PDCD11-202ENST00000466959 PLA2G12BQ9BX93 195 aa16.62■□□□□ 0.25
PDCD11-202ENST00000466959 ST5P78524 1137 aa16.61■□□□□ 0.25
PDCD11-202ENST00000466959 KAZALD1Q96I82 304 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms