RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 AMPD1P23109 780 aa8.42□□□□□ -1.06
LRCH3-212ENST00000466845 CCDC97Q96F63 343 aaPredicted RBP8.42□□□□□ -1.06
LRCH3-212ENST00000466845 NOVA2Q9UNW9 492 aaKnown RBP8.42□□□□□ -1.06
LRCH3-212ENST00000466845 KCNH4Q9UQ05 1017 aa8.42□□□□□ -1.06
LRCH3-212ENST00000466845 CNTNAP5Q8WYK1 1306 aa8.42□□□□□ -1.06
LRCH3-212ENST00000466845 ACIN1Q9UKV3 1341 aaKnown RBP8.41□□□□□ -1.06
LRCH3-212ENST00000466845 SHISA8B8ZZ34 492 aa8.41□□□□□ -1.06
LRCH3-212ENST00000466845 ATG7O95352 703 aa8.41□□□□□ -1.06
LRCH3-212ENST00000466845 C1orf229Q6ZS94 237 aaPredicted RBP8.41□□□□□ -1.06
LRCH3-212ENST00000466845 PKNOX2Q96KN3 472 aa8.41□□□□□ -1.06
LRCH3-212ENST00000466845 BRD7Q9NPI1 651 aa8.41□□□□□ -1.06
LRCH3-212ENST00000466845 RRAGCQ9HB90 399 aa8.4□□□□□ -1.06
LRCH3-212ENST00000466845 STRN4Q9NRL3 753 aa8.4□□□□□ -1.06
LRCH3-212ENST00000466845 ELOA3CA0A087WX78 387 aaPredicted RBP8.39□□□□□ -1.07
LRCH3-212ENST00000466845 ELOA3DA6NLF2 546 aaPredicted RBP8.39□□□□□ -1.07
LRCH3-212ENST00000466845 ADARB2-AS1A8MUL3 147 aa8.39□□□□□ -1.07
LRCH3-212ENST00000466845 TGFBR3LH3BV60 316 aa8.39□□□□□ -1.07
LRCH3-212ENST00000466845 EPB42P16452 691 aa8.39□□□□□ -1.07
LRCH3-212ENST00000466845 SRPK2P78362 688 aaKnown RBP8.39□□□□□ -1.07
LRCH3-212ENST00000466845 ELOA3BQ3SY89 546 aa8.39□□□□□ -1.07
LRCH3-212ENST00000466845 BTLAQ7Z6A9 289 aa8.39□□□□□ -1.07
LRCH3-212ENST00000466845 ELOA3Q8NG57 546 aa8.39□□□□□ -1.07
LRCH3-212ENST00000466845 MYO19Q96H55 970 aa8.39□□□□□ -1.07
LRCH3-212ENST00000466845 HCN2Q9UL51 889 aa8.39□□□□□ -1.07
LRCH3-212ENST00000466845 GNB5O14775 395 aa8.38□□□□□ -1.07
LRCH3-212ENST00000466845 TYRO3Q06418 890 aa8.38□□□□□ -1.07
LRCH3-212ENST00000466845 SPEM2Q0P670 501 aa8.38□□□□□ -1.07
LRCH3-212ENST00000466845 SFSWAPQ12872 951 aaKnown RBP8.38□□□□□ -1.07
LRCH3-212ENST00000466845 SYT9Q86SS6 491 aa8.38□□□□□ -1.07
LRCH3-212ENST00000466845 TNFRSF25Q93038 417 aa8.38□□□□□ -1.07
LRCH3-212ENST00000466845 PBXIP1Q96AQ6 731 aa8.38□□□□□ -1.07
LRCH3-212ENST00000466845 NGLY1Q96IV0 654 aa8.38□□□□□ -1.07
LRCH3-212ENST00000466845 NOP53Q9NZM5 478 aaKnown RBP8.38□□□□□ -1.07
LRCH3-212ENST00000466845 KLF15Q9UIH9 416 aa8.38□□□□□ -1.07
LRCH3-212ENST00000466845 PCBP4P57723 403 aaKnown RBP8.37□□□□□ -1.07
LRCH3-212ENST00000466845 C11orf91Q3C1V1 193 aa8.37□□□□□ -1.07
LRCH3-212ENST00000466845 CHSY3Q70JA7 882 aa8.37□□□□□ -1.07
LRCH3-212ENST00000466845 FCHSD1Q86WN1 690 aa8.37□□□□□ -1.07
LRCH3-212ENST00000466845 COL26A1Q96A83 441 aa8.37□□□□□ -1.07
LRCH3-212ENST00000466845 HSH2DQ96JZ2 352 aa8.37□□□□□ -1.07
LRCH3-212ENST00000466845 SNRPNP63162 240 aaKnown RBP8.36□□□□□ -1.07
LRCH3-212ENST00000466845 CDCA8Q53HL2 280 aa8.36□□□□□ -1.07
LRCH3-212ENST00000466845 LINC00114Q6XXX2 140 aa8.36□□□□□ -1.07
LRCH3-212ENST00000466845 ZNF280CQ8ND82 737 aa8.36□□□□□ -1.07
LRCH3-212ENST00000466845 KCTD17Q8N5Z5 321 aa8.35□□□□□ -1.07
LRCH3-212ENST00000466845 DCAF5Q96JK2 942 aa8.35□□□□□ -1.07
LRCH3-212ENST00000466845 MDFIQ99750 246 aa8.35□□□□□ -1.07
LRCH3-212ENST00000466845 SPDYE3A6NKU9 549 aa8.34□□□□□ -1.07
LRCH3-212ENST00000466845 DGKGP49619 791 aa8.34□□□□□ -1.07
LRCH3-212ENST00000466845 PCSK7Q16549 785 aa8.34□□□□□ -1.07
LRCH3-212ENST00000466845 DMGDHQ9UI17 866 aaKnown RBP8.34□□□□□ -1.07
LRCH3-212ENST00000466845 PTCD1O75127 700 aaKnown RBP8.33□□□□□ -1.08
LRCH3-212ENST00000466845 PPP1R15AO75807 674 aaPredicted RBP8.33□□□□□ -1.08
LRCH3-212ENST00000466845 HOXB4P17483 251 aaPredicted RBP8.33□□□□□ -1.08
LRCH3-212ENST00000466845 SLC30A3Q99726 388 aa8.33□□□□□ -1.08
LRCH3-212ENST00000466845 PRDM6Q9NQX0 595 aa8.33□□□□□ -1.08
LRCH3-212ENST00000466845 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.32□□□□□ -1.08
LRCH3-212ENST00000466845 ARSDP51689 593 aa8.32□□□□□ -1.08
LRCH3-212ENST00000466845 CCINQ13939 588 aa8.32□□□□□ -1.08
LRCH3-212ENST00000466845 QTRT2Q9H974 415 aaKnown RBP8.32□□□□□ -1.08
LRCH3-212ENST00000466845 ZMIZ1Q9ULJ6 1067 aa8.32□□□□□ -1.08
LRCH3-212ENST00000466845 ZBTB7CA1YPR0 619 aa8.31□□□□□ -1.08
LRCH3-212ENST00000466845 INPP5BP32019 993 aa8.31□□□□□ -1.08
LRCH3-212ENST00000466845 FGD1P98174 961 aa8.31□□□□□ -1.08
LRCH3-212ENST00000466845 FAM69CQ0P6D2 419 aa8.31□□□□□ -1.08
LRCH3-212ENST00000466845 DGKZQ13574 1117 aa8.31□□□□□ -1.08
LRCH3-212ENST00000466845 CLP1Q92989 425 aaKnown RBP8.31□□□□□ -1.08
LRCH3-212ENST00000466845 PNMA5Q96PV4 448 aa8.31□□□□□ -1.08
LRCH3-212ENST00000466845 GSX2Q9BZM3 304 aa8.31□□□□□ -1.08
LRCH3-212ENST00000466845 MICAL2O94851 1124 aa8.3□□□□□ -1.08
LRCH3-212ENST00000466845 ARID4AP29374 1257 aaPredicted RBP8.3□□□□□ -1.08
LRCH3-212ENST00000466845 BCS1LQ9Y276 419 aa8.3□□□□□ -1.08
LRCH3-212ENST00000466845 LGR5O75473 907 aa8.29□□□□□ -1.08
LRCH3-212ENST00000466845 IDH3AP50213 366 aa8.29□□□□□ -1.08
LRCH3-212ENST00000466845 OCLNQ16625 522 aa8.29□□□□□ -1.08
LRCH3-212ENST00000466845 BHMTQ93088 406 aa8.29□□□□□ -1.08
LRCH3-212ENST00000466845 IFT43Q96FT9 208 aa8.29□□□□□ -1.08
LRCH3-212ENST00000466845 FAM13BQ9NYF5 915 aa8.29□□□□□ -1.08
LRCH3-212ENST00000466845 KLK14Q9P0G3 267 aa8.29□□□□□ -1.08
LRCH3-212ENST00000466845 CXXC1Q9P0U4 656 aaPredicted RBP8.29□□□□□ -1.08
LRCH3-212ENST00000466845 BCCIPQ9P287 314 aaKnown RBP eCLIP8.29□□□□□ -1.08
LRCH3-212ENST00000466845 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.29□□□□□ -1.08
LRCH3-212ENST00000466845 MAP3K6O95382 1288 aa8.28□□□□□ -1.08
LRCH3-212ENST00000466845 ADH7P40394 386 aa8.28□□□□□ -1.08
LRCH3-212ENST00000466845 FKBP5Q13451 457 aaPredicted RBP8.28□□□□□ -1.08
LRCH3-212ENST00000466845 PLA2G4EQ3MJ16 856 aa8.28□□□□□ -1.08
LRCH3-212ENST00000466845 C16orf46Q6P387 395 aa8.28□□□□□ -1.08
LRCH3-212ENST00000466845 PRIMPOLQ96LW4 560 aa8.28□□□□□ -1.08
LRCH3-212ENST00000466845 MSTNO14793 375 aa8.27□□□□□ -1.09
LRCH3-212ENST00000466845 PRMT3O60678 531 aa8.27□□□□□ -1.09
LRCH3-212ENST00000466845 GRIN2CQ14957 1233 aa8.27□□□□□ -1.09
LRCH3-212ENST00000466845 TMEM164Q5U3C3 297 aa8.27□□□□□ -1.09
LRCH3-212ENST00000466845 GPAT2Q6NUI2 795 aa8.27□□□□□ -1.09
LRCH3-212ENST00000466845 STK32AQ8WU08 396 aa8.27□□□□□ -1.09
LRCH3-212ENST00000466845 EGFRP00533 1210 aa8.26□□□□□ -1.09
LRCH3-212ENST00000466845 COX20Q5RI15 118 aa8.26□□□□□ -1.09
LRCH3-212ENST00000466845 MICALL1Q8N3F8 863 aa8.26□□□□□ -1.09
LRCH3-212ENST00000466845 UBE2OQ9C0C9 1292 aaKnown RBP8.26□□□□□ -1.09
LRCH3-212ENST00000466845 COL8A1P27658 744 aa8.25□□□□□ -1.09
LRCH3-212ENST00000466845 PRRT3Q5FWE3 981 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms