RNA–Protein interactions for RNA: ENST00000466742.5

ABCF3-206, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 2,331 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-206ENST00000466742 INTS3Q68E01 1043 aaKnown RBP18.46■□□□□ 0.55
ABCF3-206ENST00000466742 EVA1CP58658 441 aa18.45■□□□□ 0.54
ABCF3-206ENST00000466742 AXDND1Q5T1B0 1012 aaPredicted RBP18.45■□□□□ 0.54
ABCF3-206ENST00000466742 DCAF5Q96JK2 942 aa18.45■□□□□ 0.54
ABCF3-206ENST00000466742 KDM3BQ7LBC6 1761 aa18.45■□□□□ 0.54
ABCF3-206ENST00000466742 PKD1L3Q7Z443 1732 aa18.45■□□□□ 0.54
ABCF3-206ENST00000466742 REC8O95072 547 aa18.45■□□□□ 0.54
ABCF3-206ENST00000466742 TNNT3P45378 269 aaPredicted RBP18.45■□□□□ 0.54
ABCF3-206ENST00000466742 LARP1Q6PKG0 1096 aaKnown RBP18.45■□□□□ 0.54
ABCF3-206ENST00000466742 ZBTB9Q96C00 473 aa18.45■□□□□ 0.54
ABCF3-206ENST00000466742 KIF1BPQ96EK5 621 aa18.45■□□□□ 0.54
ABCF3-206ENST00000466742 KCNQ3O43525 872 aa18.44■□□□□ 0.54
ABCF3-206ENST00000466742 ST18O60284 1047 aa18.44■□□□□ 0.54
ABCF3-206ENST00000466742 SLC52A2Q9HAB3 445 aa18.44■□□□□ 0.54
ABCF3-206ENST00000466742 HEG1Q9ULI3 1381 aa18.44■□□□□ 0.54
ABCF3-206ENST00000466742 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.44■□□□□ 0.54
ABCF3-206ENST00000466742 BRD1O95696 1058 aa18.44■□□□□ 0.54
ABCF3-206ENST00000466742 CTR9Q6PD62 1173 aa18.44■□□□□ 0.54
ABCF3-206ENST00000466742 STRN4Q9NRL3 753 aa18.44■□□□□ 0.54
ABCF3-206ENST00000466742 GOLGA6L6A8MZA4 724 aa18.43■□□□□ 0.54
ABCF3-206ENST00000466742 IL2RBP14784 551 aa18.43■□□□□ 0.54
ABCF3-206ENST00000466742 KMT5BQ4FZB7 885 aa18.43■□□□□ 0.54
ABCF3-206ENST00000466742 HDGFL1Q5TGJ6 251 aa18.43■□□□□ 0.54
ABCF3-206ENST00000466742 TRERF1Q96PN7 1200 aa18.43■□□□□ 0.54
ABCF3-206ENST00000466742 USP26Q9BXU7 913 aa18.43■□□□□ 0.54
ABCF3-206ENST00000466742 NAA30Q147X3 362 aaPredicted RBP18.43■□□□□ 0.54
ABCF3-206ENST00000466742 G2E3Q7L622 706 aa18.43■□□□□ 0.54
ABCF3-206ENST00000466742 ZCRB1Q8TBF4 217 aaKnown RBP18.43■□□□□ 0.54
ABCF3-206ENST00000466742 GCC1Q96CN9 775 aa18.43■□□□□ 0.54
ABCF3-206ENST00000466742 BTG4Q9NY30 223 aa18.43■□□□□ 0.54
ABCF3-206ENST00000466742 RSPH14Q9UHP6 348 aa18.43■□□□□ 0.54
ABCF3-206ENST00000466742 PCDH11XQ9BZA7 1347 aa18.42■□□□□ 0.54
ABCF3-206ENST00000466742 PCDH11YQ9BZA8 1340 aa18.42■□□□□ 0.54
ABCF3-206ENST00000466742 MRC1P22897 1456 aa18.42■□□□□ 0.54
ABCF3-206ENST00000466742 COL16A1Q07092 1604 aaPredicted RBP18.42■□□□□ 0.54
ABCF3-206ENST00000466742 RBM6P78332 1123 aaKnown RBP18.41■□□□□ 0.54
ABCF3-206ENST00000466742 DHX37Q8IY37 1157 aaKnown RBP18.41■□□□□ 0.54
ABCF3-206ENST00000466742 CCDC112Q8NEF3 446 aa18.41■□□□□ 0.54
ABCF3-206ENST00000466742 NOL10Q9BSC4 688 aaKnown RBP18.41■□□□□ 0.54
ABCF3-206ENST00000466742 RASSF4Q9H2L5 321 aa18.41■□□□□ 0.54
ABCF3-206ENST00000466742 FLIIQ13045 1269 aa18.41■□□□□ 0.54
ABCF3-206ENST00000466742 SLFNL1Q499Z3 407 aa18.41■□□□□ 0.54
ABCF3-206ENST00000466742 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.41■□□□□ 0.54
ABCF3-206ENST00000466742 BCCIPQ9P287 314 aaKnown RBP eCLIP18.41■□□□□ 0.54
ABCF3-206ENST00000466742 PARP4Q9UKK3 1724 aaKnown RBP18.41■□□□□ 0.54
ABCF3-206ENST00000466742 MUM1L1Q5H9M0 696 aa18.4■□□□□ 0.54
ABCF3-206ENST00000466742 CCDC183Q5T5S1 534 aa18.4■□□□□ 0.54
ABCF3-206ENST00000466742 CHMP4CQ96CF2 233 aa18.4■□□□□ 0.54
ABCF3-206ENST00000466742 SIPA1L3O60292 1781 aaPredicted RBP18.4■□□□□ 0.54
ABCF3-206ENST00000466742 COL14A1Q05707 1796 aaKnown RBP18.4■□□□□ 0.54
ABCF3-206ENST00000466742 DHX16O60231 1041 aaKnown RBP18.4■□□□□ 0.54
ABCF3-206ENST00000466742 GIGYF1O75420 1035 aaPredicted RBP18.39■□□□□ 0.53
ABCF3-206ENST00000466742 HCLS1P14317 486 aaPredicted RBP18.39■□□□□ 0.53
ABCF3-206ENST00000466742 ANKRD45Q5TZF3 282 aa18.39■□□□□ 0.53
ABCF3-206ENST00000466742 NKX1-1Q15270 411 aaPredicted RBP18.39■□□□□ 0.53
ABCF3-206ENST00000466742 ZNF790Q6PG37 636 aa18.39■□□□□ 0.53
ABCF3-206ENST00000466742 NFATC2IPQ8NCF5 419 aa18.39■□□□□ 0.53
ABCF3-206ENST00000466742 NECTIN2Q92692 538 aa18.39■□□□□ 0.53
ABCF3-206ENST00000466742 ZNF622Q969S3 477 aaKnown RBP eCLIP18.39■□□□□ 0.53
ABCF3-206ENST00000466742 SCN11AQ9UI33 1791 aa18.38■□□□□ 0.53
ABCF3-206ENST00000466742 GTF2A1P52655 376 aaPredicted RBP18.38■□□□□ 0.53
ABCF3-206ENST00000466742 PHLPP1O60346 1717 aa18.38■□□□□ 0.53
ABCF3-206ENST00000466742 LOC102724159A0A0B4J2E5 919 aa18.38■□□□□ 0.53
ABCF3-206ENST00000466742 TNNT1P13805 278 aa18.38■□□□□ 0.53
ABCF3-206ENST00000466742 CCT4P50991 539 aaKnown RBP18.38■□□□□ 0.53
ABCF3-206ENST00000466742 PWP2Q15269 919 aaKnown RBP18.38■□□□□ 0.53
ABCF3-206ENST00000466742 AP5Z1O43299 807 aa18.37■□□□□ 0.53
ABCF3-206ENST00000466742 EIF2S2P20042 333 aaKnown RBP18.37■□□□□ 0.53
ABCF3-206ENST00000466742 MX1P20591 662 aa18.37■□□□□ 0.53
ABCF3-206ENST00000466742 PIP4K2BP78356 416 aa18.37■□□□□ 0.53
ABCF3-206ENST00000466742 RAD50Q92878 1312 aa18.37■□□□□ 0.53
ABCF3-206ENST00000466742 GADD45BO75293 160 aaPredicted RBP18.37■□□□□ 0.53
ABCF3-206ENST00000466742 ST7Q9NRC1 585 aa18.37■□□□□ 0.53
ABCF3-206ENST00000466742 APPP05067 770 aa18.36■□□□□ 0.53
ABCF3-206ENST00000466742 CABP4P57796 275 aa18.35■□□□□ 0.53
ABCF3-206ENST00000466742 FOXD4L5Q5VV16 416 aaPredicted RBP18.35■□□□□ 0.53
ABCF3-206ENST00000466742 ICE2Q659A1 982 aa18.35■□□□□ 0.53
ABCF3-206ENST00000466742 FOXD4L4Q8WXT5 416 aaPredicted RBP18.35■□□□□ 0.53
ABCF3-206ENST00000466742 FUCA2Q9BTY2 467 aa18.35■□□□□ 0.53
ABCF3-206ENST00000466742 ERVV-2B6SEH9 535 aa18.35■□□□□ 0.53
ABCF3-206ENST00000466742 UBAP1LF5GYI3 381 aa18.35■□□□□ 0.53
ABCF3-206ENST00000466742 F6X3S4 739 aa18.35■□□□□ 0.53
ABCF3-206ENST00000466742 BMS1Q14692 1282 aaKnown RBP18.35■□□□□ 0.53
ABCF3-206ENST00000466742 TMEM87AQ8NBN3 555 aa18.35■□□□□ 0.53
ABCF3-206ENST00000466742 C16orf45Q96MC5 204 aaPredicted RBP18.35■□□□□ 0.53
ABCF3-206ENST00000466742 MYCBPQ99417 103 aaPredicted RBP18.35■□□□□ 0.53
ABCF3-206ENST00000466742 BRMS1Q9HCU9 246 aa18.35■□□□□ 0.53
ABCF3-206ENST00000466742 CHPF2Q9P2E5 772 aa18.35■□□□□ 0.53
ABCF3-206ENST00000466742 FBXO38Q6PIJ6 1188 aa18.34■□□□□ 0.53
ABCF3-206ENST00000466742 USP48Q86UV5 1035 aa18.34■□□□□ 0.53
ABCF3-206ENST00000466742 NCAPGQ9BPX3 1015 aa18.34■□□□□ 0.53
ABCF3-206ENST00000466742 DBF4Q9UBU7 674 aaPredicted RBP18.34■□□□□ 0.53
ABCF3-206ENST00000466742 SLC39A6Q13433 755 aa18.34■□□□□ 0.53
ABCF3-206ENST00000466742 PXDNLA1KZ92 1463 aa18.34■□□□□ 0.53
ABCF3-206ENST00000466742 GSPT1P15170 499 aaKnown RBP18.33■□□□□ 0.53
ABCF3-206ENST00000466742 ZNF446Q9NWS9 450 aa18.33■□□□□ 0.53
ABCF3-206ENST00000466742 CACNA1FO60840 1977 aa18.33■□□□□ 0.53
ABCF3-206ENST00000466742 DISP2A7MBM2 1401 aa18.33■□□□□ 0.53
ABCF3-206ENST00000466742 MYCNP04198 464 aaPredicted RBP18.33■□□□□ 0.52
ABCF3-206ENST00000466742 CASQ1P31415 396 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms