RNA–Protein interactions for RNA: ENST00000466562.5

CRAMP1-204, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 4

Gene CRAMP1, Length 534 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-204ENST00000466562 PLBD2Q8NHP8 589 aa20.59■□□□□ 0.89
CRAMP1-204ENST00000466562 TAOK3Q9H2K8 898 aa20.59■□□□□ 0.89
CRAMP1-204ENST00000466562 KDM2BQ8NHM5 1336 aa20.58■□□□□ 0.89
CRAMP1-204ENST00000466562 TNRC6CQ9HCJ0 1690 aaKnown RBP20.58■□□□□ 0.89
CRAMP1-204ENST00000466562 NLRP10Q86W26 655 aa20.58■□□□□ 0.89
CRAMP1-204ENST00000466562 CCDC93Q567U6 631 aa20.57■□□□□ 0.88
CRAMP1-204ENST00000466562 SLC10A5Q5PT55 438 aa20.57■□□□□ 0.88
CRAMP1-204ENST00000466562 ARFGEF2Q9Y6D5 1785 aa20.57■□□□□ 0.88
CRAMP1-204ENST00000466562 HOXA10P31260 410 aaPredicted RBP20.56■□□□□ 0.88
CRAMP1-204ENST00000466562 OLFM4Q6UX06 510 aa20.56■□□□□ 0.88
CRAMP1-204ENST00000466562 C3orf67Q6ZVT6 689 aa20.56■□□□□ 0.88
CRAMP1-204ENST00000466562 TSPYL6Q8N831 410 aa20.56■□□□□ 0.88
CRAMP1-204ENST00000466562 RPGRQ92834 1020 aaKnown RBP20.56■□□□□ 0.88
CRAMP1-204ENST00000466562 TSR2Q969E8 191 aaKnown RBP20.56■□□□□ 0.88
CRAMP1-204ENST00000466562 NLRP3Q96P20 1036 aa20.56■□□□□ 0.88
CRAMP1-204ENST00000466562 FER1L6Q2WGJ9 1857 aa20.56■□□□□ 0.88
CRAMP1-204ENST00000466562 RNF123Q5XPI4 1314 aa20.55■□□□□ 0.88
CRAMP1-204ENST00000466562 GLTPD2A6NH11 291 aa20.55■□□□□ 0.88
CRAMP1-204ENST00000466562 PHAXQ9H814 394 aaKnown RBP20.55■□□□□ 0.88
CRAMP1-204ENST00000466562 RBM17Q96I25 401 aaKnown RBP20.54■□□□□ 0.88
CRAMP1-204ENST00000466562 ISCA1Q9BUE6 129 aa20.54■□□□□ 0.88
CRAMP1-204ENST00000466562 RRAGCQ9HB90 399 aa20.54■□□□□ 0.88
CRAMP1-204ENST00000466562 TRMT112Q9UI30 125 aaKnown RBP20.54■□□□□ 0.88
CRAMP1-204ENST00000466562 CACNA1SQ13698 1873 aa20.54■□□□□ 0.88
CRAMP1-204ENST00000466562 IL16Q14005 1332 aa20.53■□□□□ 0.88
CRAMP1-204ENST00000466562 TOMM70O94826 608 aa20.53■□□□□ 0.88
CRAMP1-204ENST00000466562 FKBP4Q02790 459 aaKnown RBP eCLIP20.53■□□□□ 0.88
CRAMP1-204ENST00000466562 CCDC30Q5VVM6 783 aa20.53■□□□□ 0.88
CRAMP1-204ENST00000466562 RTKN2Q8IZC4 609 aa20.53■□□□□ 0.88
CRAMP1-204ENST00000466562 FAM9BQ8IZU0 186 aa20.53■□□□□ 0.88
CRAMP1-204ENST00000466562 SYNE4Q8N205 404 aa20.53■□□□□ 0.88
CRAMP1-204ENST00000466562 CRAMP1Q96RY5 1269 aa20.53■□□□□ 0.88
CRAMP1-204ENST00000466562 CHMP4AQ9BY43 222 aa20.53■□□□□ 0.88
CRAMP1-204ENST00000466562 SALL2Q9Y467 1007 aaPredicted RBP20.53■□□□□ 0.88
CRAMP1-204ENST00000466562 SH3TC1Q8TE82 1336 aa20.53■□□□□ 0.88
CRAMP1-204ENST00000466562 ATP5J2-PTCD1G3V325 749 aa20.52■□□□□ 0.88
CRAMP1-204ENST00000466562 HCLS1P14317 486 aaPredicted RBP20.51■□□□□ 0.87
CRAMP1-204ENST00000466562 GOLGA2Q08379 1002 aa20.51■□□□□ 0.87
CRAMP1-204ENST00000466562 RIC3Q7Z5B4 369 aa20.51■□□□□ 0.87
CRAMP1-204ENST00000466562 ZNF428Q96B54 188 aa20.51■□□□□ 0.87
CRAMP1-204ENST00000466562 ANKRD36CQ5JPF3 1778 aa20.51■□□□□ 0.87
CRAMP1-204ENST00000466562 TRIM28Q13263 835 aaKnown RBP20.5■□□□□ 0.87
CRAMP1-204ENST00000466562 CC2D2BQ6DHV5 1058 aa20.5■□□□□ 0.87
CRAMP1-204ENST00000466562 DPY19L2Q6NUT2 758 aa20.5■□□□□ 0.87
CRAMP1-204ENST00000466562 WDR63Q8IWG1 891 aa20.5■□□□□ 0.87
CRAMP1-204ENST00000466562 ZNF277Q9NRM2 450 aaPredicted RBP20.5■□□□□ 0.87
CRAMP1-204ENST00000466562 SNED1Q8TER0 1413 aa20.5■□□□□ 0.87
CRAMP1-204ENST00000466562 TWISTNBQ3B726 338 aaPredicted RBP20.49■□□□□ 0.87
CRAMP1-204ENST00000466562 C16orf71Q8IYS4 520 aaPredicted RBP20.49■□□□□ 0.87
CRAMP1-204ENST00000466562 TIAM2Q8IVF5 1701 aa20.49■□□□□ 0.87
CRAMP1-204ENST00000466562 CCDC88AQ3V6T2 1871 aa20.49■□□□□ 0.87
CRAMP1-204ENST00000466562 PPEF1O14829 653 aaPredicted RBP20.48■□□□□ 0.87
CRAMP1-204ENST00000466562 HSPA6P17066 643 aa20.48■□□□□ 0.87
CRAMP1-204ENST00000466562 FAM89AQ96GI7 184 aa20.48■□□□□ 0.87
CRAMP1-204ENST00000466562 PSMD1Q99460 953 aa20.48■□□□□ 0.87
CRAMP1-204ENST00000466562 TCERG1O14776 1098 aaKnown RBP20.47■□□□□ 0.87
CRAMP1-204ENST00000466562 VEGFAP15692 232 aaPredicted RBP20.47■□□□□ 0.87
CRAMP1-204ENST00000466562 SLC51AQ86UW1 340 aa20.47■□□□□ 0.87
CRAMP1-204ENST00000466562 RBM46Q8TBY0 533 aaKnown RBP20.47■□□□□ 0.87
CRAMP1-204ENST00000466562 ABCC4O15439 1325 aa20.47■□□□□ 0.87
CRAMP1-204ENST00000466562 FANCIQ9NVI1 1328 aa20.47■□□□□ 0.87
CRAMP1-204ENST00000466562 POTECB2RU33 542 aa20.46■□□□□ 0.87
CRAMP1-204ENST00000466562 MYD88Q99836 296 aa20.46■□□□□ 0.87
CRAMP1-204ENST00000466562 DICER1Q9UPY3 1922 aaKnown RBP20.45■□□□□ 0.86
CRAMP1-204ENST00000466562 DDNO94850 711 aaPredicted RBP20.45■□□□□ 0.86
CRAMP1-204ENST00000466562 DDX58O95786 925 aaKnown RBP20.45■□□□□ 0.86
CRAMP1-204ENST00000466562 IARSP41252 1262 aaKnown RBP20.45■□□□□ 0.86
CRAMP1-204ENST00000466562 GRIPAP1Q4V328 841 aa20.45■□□□□ 0.86
CRAMP1-204ENST00000466562 STK31Q9BXU1 1019 aa20.45■□□□□ 0.86
CRAMP1-204ENST00000466562 ATP6V0A2Q9Y487 856 aa20.45■□□□□ 0.86
CRAMP1-204ENST00000466562 BBOX1O75936 387 aa20.44■□□□□ 0.86
CRAMP1-204ENST00000466562 RTL5Q5HYW3 569 aaPredicted RBP20.44■□□□□ 0.86
CRAMP1-204ENST00000466562 DDX46Q7L014 1031 aaKnown RBP20.44■□□□□ 0.86
CRAMP1-204ENST00000466562 METTL22Q9BUU2 404 aaPredicted RBP20.44■□□□□ 0.86
CRAMP1-204ENST00000466562 SPINK5Q9NQ38 1064 aaPredicted RBP20.44■□□□□ 0.86
CRAMP1-204ENST00000466562 GRAPQ13588 217 aa20.43■□□□□ 0.86
CRAMP1-204ENST00000466562 SF3B3Q15393 1217 aaKnown RBP20.43■□□□□ 0.86
CRAMP1-204ENST00000466562 ZBTB38Q8NAP3 1195 aaPredicted RBP20.43■□□□□ 0.86
CRAMP1-204ENST00000466562 GRAPLQ8TC17 118 aaPredicted RBP20.43■□□□□ 0.86
CRAMP1-204ENST00000466562 MAP3K2Q9Y2U5 619 aa20.43■□□□□ 0.86
CRAMP1-204ENST00000466562 IRS4O14654 1257 aaPredicted RBP20.42■□□□□ 0.86
CRAMP1-204ENST00000466562 VAMP4O75379 141 aa20.42■□□□□ 0.86
CRAMP1-204ENST00000466562 SLC4A2P04920 1241 aa20.42■□□□□ 0.86
CRAMP1-204ENST00000466562 FSTL1Q12841 308 aa20.42■□□□□ 0.86
CRAMP1-204ENST00000466562 KSR2Q6VAB6 950 aa20.42■□□□□ 0.86
CRAMP1-204ENST00000466562 CCDC191Q8NCU4 936 aa20.42■□□□□ 0.86
CRAMP1-204ENST00000466562 TMX4Q9H1E5 349 aaPredicted RBP20.42■□□□□ 0.86
CRAMP1-204ENST00000466562 CEP350Q5VT06 3117 aa20.41■□□□□ 0.86
CRAMP1-204ENST00000466562 PI4KAP2A4QPH2 592 aa20.41■□□□□ 0.86
CRAMP1-204ENST00000466562 FZD9O00144 591 aa20.41■□□□□ 0.86
CRAMP1-204ENST00000466562 EXOSC9Q06265 439 aaKnown RBP20.41■□□□□ 0.86
CRAMP1-204ENST00000466562 G2E3Q7L622 706 aa20.41■□□□□ 0.86
CRAMP1-204ENST00000466562 SP8Q8IXZ3 490 aa20.41■□□□□ 0.86
CRAMP1-204ENST00000466562 PI4KAP1Q8N8J0 262 aa20.41■□□□□ 0.86
CRAMP1-204ENST00000466562 WDR90Q96KV7 1748 aa20.41■□□□□ 0.86
CRAMP1-204ENST00000466562 LAMB2P55268 1798 aa20.4■□□□□ 0.86
CRAMP1-204ENST00000466562 JDP2Q8WYK2 163 aa20.4■□□□□ 0.86
CRAMP1-204ENST00000466562 ZNF541Q9H0D2 1346 aa20.4■□□□□ 0.86
CRAMP1-204ENST00000466562 CWC25Q9NXE8 425 aaPredicted RBP20.4■□□□□ 0.86
CRAMP1-204ENST00000466562 PCCAP05165 728 aaPredicted RBP20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms