RNA–Protein interactions for RNA: ENST00000466175.5

LETM1-202, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 2

Gene LETM1, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-202ENST00000466175 BICC1Q9H694 974 aaKnown RBP22.3■■□□□ 1.16
LETM1-202ENST00000466175 PTF1AQ7RTS3 328 aa22.29■■□□□ 1.16
LETM1-202ENST00000466175 KAZALD1Q96I82 304 aa22.29■■□□□ 1.16
LETM1-202ENST00000466175 KCPQ6ZWJ8 1503 aa22.29■■□□□ 1.16
LETM1-202ENST00000466175 AFDNP55196 1824 aaKnown RBP22.29■■□□□ 1.16
LETM1-202ENST00000466175 RBM42Q9BTD8 480 aaKnown RBP22.28■■□□□ 1.16
LETM1-202ENST00000466175 IFIT2P09913 472 aaKnown RBP22.28■■□□□ 1.16
LETM1-202ENST00000466175 SF3B2Q13435 895 aaKnown RBP22.28■■□□□ 1.16
LETM1-202ENST00000466175 DEFB132Q7Z7B7 95 aa22.28■■□□□ 1.16
LETM1-202ENST00000466175 ACSBG1Q96GR2 724 aa22.28■■□□□ 1.16
LETM1-202ENST00000466175 ECHDC1Q9NTX5 307 aa22.28■■□□□ 1.16
LETM1-202ENST00000466175 TNS1Q9HBL0 1735 aaKnown RBP22.27■■□□□ 1.16
LETM1-202ENST00000466175 MCM2P49736 904 aa22.27■■□□□ 1.16
LETM1-202ENST00000466175 CD2BP2O95400 341 aaKnown RBP22.26■■□□□ 1.15
LETM1-202ENST00000466175 PTMSP20962 102 aa22.25■■□□□ 1.15
LETM1-202ENST00000466175 MCM4P33991 863 aa22.25■■□□□ 1.15
LETM1-202ENST00000466175 CCDC125Q86Z20 511 aa22.25■■□□□ 1.15
LETM1-202ENST00000466175 KCNQ2O43526 872 aa22.24■■□□□ 1.15
LETM1-202ENST00000466175 TEX13AQ9BXU3 409 aaPredicted RBP22.24■■□□□ 1.15
LETM1-202ENST00000466175 DDX11L8A8MPP1 907 aa22.24■■□□□ 1.15
LETM1-202ENST00000466175 RABL6Q3YEC7 729 aaPredicted RBP22.24■■□□□ 1.15
LETM1-202ENST00000466175 RUFY2Q8WXA3 655 aa22.24■■□□□ 1.15
LETM1-202ENST00000466175 CWC22Q9HCG8 908 aaKnown RBP22.24■■□□□ 1.15
LETM1-202ENST00000466175 ANO2Q9NQ90 1003 aa22.24■■□□□ 1.15
LETM1-202ENST00000466175 COPRSQ9NQ92 184 aa22.23■■□□□ 1.15
LETM1-202ENST00000466175 TMOD3Q9NYL9 352 aa22.23■■□□□ 1.15
LETM1-202ENST00000466175 PA2G4Q9UQ80 394 aaKnown RBP22.23■■□□□ 1.15
LETM1-202ENST00000466175 NUP188Q5SRE5 1749 aa22.22■■□□□ 1.15
LETM1-202ENST00000466175 DOT1LQ8TEK3 1739 aa22.22■■□□□ 1.15
LETM1-202ENST00000466175 APBA3O96018 575 aa22.22■■□□□ 1.15
LETM1-202ENST00000466175 RAB3GAP1Q15042 981 aa22.22■■□□□ 1.15
LETM1-202ENST00000466175 VSIG10Q8N0Z9 540 aa22.22■■□□□ 1.15
LETM1-202ENST00000466175 GBP4Q96PP9 640 aa22.22■■□□□ 1.15
LETM1-202ENST00000466175 HIP1O00291 1037 aa22.21■■□□□ 1.15
LETM1-202ENST00000466175 EN1Q05925 392 aaPredicted RBP22.21■■□□□ 1.15
LETM1-202ENST00000466175 AACSQ86V21 672 aa22.21■■□□□ 1.15
LETM1-202ENST00000466175 TOGARAM1Q9Y4F4 1720 aa22.21■■□□□ 1.15
LETM1-202ENST00000466175 BCL9O00512 1426 aa22.21■■□□□ 1.15
LETM1-202ENST00000466175 NBPF26B4DH59 902 aa22.2■■□□□ 1.15
LETM1-202ENST00000466175 SGSM2O43147 1006 aa22.2■■□□□ 1.15
LETM1-202ENST00000466175 SASH1O94885 1247 aa22.2■■□□□ 1.15
LETM1-202ENST00000466175 NBPF14Q5TI25 921 aa22.2■■□□□ 1.15
LETM1-202ENST00000466175 NBPF10Q6P3W6 841 aaKnown RBP22.2■■□□□ 1.15
LETM1-202ENST00000466175 NBPF15Q8N660 670 aa22.2■■□□□ 1.15
LETM1-202ENST00000466175 SYTL4Q96C24 671 aaPredicted RBP22.2■■□□□ 1.15
LETM1-202ENST00000466175 EVI5LQ96CN4 794 aa22.2■■□□□ 1.15
LETM1-202ENST00000466175 A0A087WZG4 1122 aa22.19■■□□□ 1.14
LETM1-202ENST00000466175 BAG6P46379 1132 aa22.19■■□□□ 1.14
LETM1-202ENST00000466175 NHSQ6T4R5 1651 aa22.19■■□□□ 1.14
LETM1-202ENST00000466175 H7C1W4 665 aa22.18■■□□□ 1.14
LETM1-202ENST00000466175 PRIM1P49642 420 aaKnown RBP22.18■■□□□ 1.14
LETM1-202ENST00000466175 NUCB2P80303 420 aa22.18■■□□□ 1.14
LETM1-202ENST00000466175 KIAA1211Q6ZU35 1233 aa22.18■■□□□ 1.14
LETM1-202ENST00000466175 BCL11BQ9C0K0 894 aaPredicted RBP22.18■■□□□ 1.14
LETM1-202ENST00000466175 CWC25Q9NXE8 425 aaPredicted RBP22.18■■□□□ 1.14
LETM1-202ENST00000466175 HSPA4P34932 840 aa22.17■■□□□ 1.14
LETM1-202ENST00000466175 CASP7P55210 303 aa22.17■■□□□ 1.14
LETM1-202ENST00000466175 UBE3BQ7Z3V4 1068 aa22.17■■□□□ 1.14
LETM1-202ENST00000466175 CCDC191Q8NCU4 936 aa22.17■■□□□ 1.14
LETM1-202ENST00000466175 RAD50Q92878 1312 aa22.17■■□□□ 1.14
LETM1-202ENST00000466175 PIP4K2AP48426 406 aaPredicted RBP22.17■■□□□ 1.14
LETM1-202ENST00000466175 DIAPH3Q9NSV4 1193 aa22.17■■□□□ 1.14
LETM1-202ENST00000466175 BTAF1O14981 1849 aa22.16■■□□□ 1.14
LETM1-202ENST00000466175 RFX5P48382 616 aaPredicted RBP22.16■■□□□ 1.14
LETM1-202ENST00000466175 NEK4P51957 841 aa22.16■■□□□ 1.14
LETM1-202ENST00000466175 EPHA10Q5JZY3 1008 aa22.16■■□□□ 1.14
LETM1-202ENST00000466175 CLEC17AQ6ZS10 378 aa22.16■■□□□ 1.14
LETM1-202ENST00000466175 TNPO1Q92973 898 aaKnown RBP22.16■■□□□ 1.14
LETM1-202ENST00000466175 EAF2Q96CJ1 260 aaPredicted RBP22.16■■□□□ 1.14
LETM1-202ENST00000466175 PTCD1O75127 700 aaKnown RBP22.15■■□□□ 1.14
LETM1-202ENST00000466175 MAP4K4O95819 1239 aaPredicted RBP22.15■■□□□ 1.14
LETM1-202ENST00000466175 EZH2Q15910 746 aaKnown RBP22.15■■□□□ 1.14
LETM1-202ENST00000466175 ATP5J2-PTCD1G3V325 749 aa22.14■■□□□ 1.14
LETM1-202ENST00000466175 A1BGP04217 495 aa22.14■■□□□ 1.14
LETM1-202ENST00000466175 PTPN12Q05209 780 aaKnown RBP22.14■■□□□ 1.14
LETM1-202ENST00000466175 ITGB4P16144 1822 aa22.13■■□□□ 1.13
LETM1-202ENST00000466175 STARD3NLO95772 234 aa22.13■■□□□ 1.13
LETM1-202ENST00000466175 TTLL7Q6ZT98 887 aa22.13■■□□□ 1.13
LETM1-202ENST00000466175 LSG1Q9H089 658 aaKnown RBP22.13■■□□□ 1.13
LETM1-202ENST00000466175 SIL1Q9H173 461 aa22.13■■□□□ 1.13
LETM1-202ENST00000466175 TJP1Q07157 1748 aa22.12■■□□□ 1.13
LETM1-202ENST00000466175 SKOR2Q2VWA4 1001 aaPredicted RBP22.12■■□□□ 1.13
LETM1-202ENST00000466175 ATG3Q9NT62 314 aa22.12■■□□□ 1.13
LETM1-202ENST00000466175 TRIM28Q13263 835 aaKnown RBP22.11■■□□□ 1.13
LETM1-202ENST00000466175 PIGBQ92521 554 aa22.11■■□□□ 1.13
LETM1-202ENST00000466175 CAMKK2Q96RR4 588 aa22.11■■□□□ 1.13
LETM1-202ENST00000466175 FOXD4L1Q9NU39 408 aa22.11■■□□□ 1.13
LETM1-202ENST00000466175 PALD1Q9ULE6 856 aa22.11■■□□□ 1.13
LETM1-202ENST00000466175 GOLGA6L22H0YM25 854 aa22.1■■□□□ 1.13
LETM1-202ENST00000466175 FOXO4P98177 505 aa22.1■■□□□ 1.13
LETM1-202ENST00000466175 CWC27Q6UX04 472 aaKnown RBP22.1■■□□□ 1.13
LETM1-202ENST00000466175 TICAM2Q86XR7 235 aa22.1■■□□□ 1.13
LETM1-202ENST00000466175 INTS4Q96HW7 963 aaKnown RBP22.1■■□□□ 1.13
LETM1-202ENST00000466175 CCDC8Q9H0W5 538 aaPredicted RBP22.1■■□□□ 1.13
LETM1-202ENST00000466175 RFX7Q2KHR2 1363 aa22.1■■□□□ 1.13
LETM1-202ENST00000466175 ATP5JP18859 108 aa22.09■■□□□ 1.13
LETM1-202ENST00000466175 KIF6Q6ZMV9 814 aa22.09■■□□□ 1.13
LETM1-202ENST00000466175 GPR108Q9NPR9 543 aa22.09■■□□□ 1.13
LETM1-202ENST00000466175 SNRKQ9NRH2 765 aa22.09■■□□□ 1.13
LETM1-202ENST00000466175 TRAK2O60296 914 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms