RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 NFIXQ14938 502 aa14.09□□□□□ -0.15
VCP-204ENST00000466100 PARP10Q53GL7 1025 aa14.09□□□□□ -0.15
VCP-204ENST00000466100 ITPRIPQ8IWB1 547 aa14.09□□□□□ -0.15
VCP-204ENST00000466100 SLC16A10Q8TF71 515 aa14.09□□□□□ -0.15
VCP-204ENST00000466100 CRBNQ96SW2 442 aa14.09□□□□□ -0.15
VCP-204ENST00000466100 USP44Q9H0E7 712 aa14.09□□□□□ -0.15
VCP-204ENST00000466100 CWC25Q9NXE8 425 aaPredicted RBP14.09□□□□□ -0.15
VCP-204ENST00000466100 NIP7Q9Y221 180 aaKnown RBP eCLIP14.09□□□□□ -0.15
VCP-204ENST00000466100 CARMIL3Q8ND23 1372 aa14.09□□□□□ -0.15
VCP-204ENST00000466100 KIF13BQ9NQT8 1826 aa14.08□□□□□ -0.15
VCP-204ENST00000466100 MSH5O43196 834 aa14.08□□□□□ -0.16
VCP-204ENST00000466100 NTSR2O95665 410 aa14.08□□□□□ -0.16
VCP-204ENST00000466100 IRX6P78412 446 aaPredicted RBP14.08□□□□□ -0.16
VCP-204ENST00000466100 DDR1Q08345 913 aa14.08□□□□□ -0.16
VCP-204ENST00000466100 NLGN1Q8N2Q7 840 aa14.08□□□□□ -0.16
VCP-204ENST00000466100 MEIS3Q99687 375 aa14.08□□□□□ -0.16
VCP-204ENST00000466100 PSDA5PKW4 1024 aaPredicted RBP14.07□□□□□ -0.16
VCP-204ENST00000466100 GRM8O00222 908 aa14.07□□□□□ -0.16
VCP-204ENST00000466100 POLRMTO00411 1230 aaKnown RBP14.07□□□□□ -0.16
VCP-204ENST00000466100 ZBTB7BO15156 539 aaPredicted RBP14.07□□□□□ -0.16
VCP-204ENST00000466100 SUSD4Q5VX71 490 aa14.07□□□□□ -0.16
VCP-204ENST00000466100 MSL1Q68DK7 614 aa14.07□□□□□ -0.16
VCP-204ENST00000466100 DDX19BQ9UMR2 479 aa14.07□□□□□ -0.16
VCP-204ENST00000466100 RIC1Q4ADV7 1423 aa14.07□□□□□ -0.16
VCP-204ENST00000466100 H7C1W4 665 aa14.06□□□□□ -0.16
VCP-204ENST00000466100 PCCAP05165 728 aaPredicted RBP14.06□□□□□ -0.16
VCP-204ENST00000466100 NBPF7P0C2Y1 421 aaPredicted RBP14.06□□□□□ -0.16
VCP-204ENST00000466100 BICDL1Q6ZP65 573 aa14.06□□□□□ -0.16
VCP-204ENST00000466100 SETDB2Q96T68 719 aa14.06□□□□□ -0.16
VCP-204ENST00000466100 ABCC12Q96J65 1359 aa14.06□□□□□ -0.16
VCP-204ENST00000466100 COL11A2P13942 1736 aaPredicted RBP14.05□□□□□ -0.16
VCP-204ENST00000466100 GOLGB1Q14789 3259 aaKnown RBP14.05□□□□□ -0.16
VCP-204ENST00000466100 ZBTB38Q8NAP3 1195 aaPredicted RBP14.05□□□□□ -0.16
VCP-204ENST00000466100 EXOC6Q8TAG9 804 aa14.05□□□□□ -0.16
VCP-204ENST00000466100 ZBTB40Q9NUA8 1239 aa14.05□□□□□ -0.16
VCP-204ENST00000466100 CDHR2Q9BYE9 1310 aa14.05□□□□□ -0.16
VCP-204ENST00000466100 KIAA1551Q9HCM1 1747 aa14.04□□□□□ -0.16
VCP-204ENST00000466100 MMP10P09238 476 aa14.04□□□□□ -0.16
VCP-204ENST00000466100 UBE3BQ7Z3V4 1068 aa14.04□□□□□ -0.16
VCP-204ENST00000466100 PPP1R42Q7Z4L9 355 aa14.04□□□□□ -0.16
VCP-204ENST00000466100 SYNE4Q8N205 404 aa14.04□□□□□ -0.16
VCP-204ENST00000466100 KAZALD1Q96I82 304 aa14.04□□□□□ -0.16
VCP-204ENST00000466100 UTP14AQ9BVJ6 771 aaKnown RBP14.04□□□□□ -0.16
VCP-204ENST00000466100 MTFR1LQ9H019 292 aa14.04□□□□□ -0.16
VCP-204ENST00000466100 DLEC1Q9Y238 1755 aa14.04□□□□□ -0.16
VCP-204ENST00000466100 ZBTB7AO95365 584 aa14.03□□□□□ -0.16
VCP-204ENST00000466100 GNAI3P08754 354 aa14.03□□□□□ -0.16
VCP-204ENST00000466100 NBPF5PQ86XG9 351 aaPredicted RBP14.03□□□□□ -0.16
VCP-204ENST00000466100 JARID2Q92833 1246 aaPredicted RBP14.03□□□□□ -0.16
VCP-204ENST00000466100 FAM89AQ96GI7 184 aa14.03□□□□□ -0.16
VCP-204ENST00000466100 SUCLG2Q96I99 432 aa14.03□□□□□ -0.16
VCP-204ENST00000466100 SGIP1Q9BQI5 828 aa14.03□□□□□ -0.16
VCP-204ENST00000466100 NYXQ9GZU5 481 aa14.03□□□□□ -0.16
VCP-204ENST00000466100 C9orf78Q9NZ63 289 aaPredicted RBP14.03□□□□□ -0.16
VCP-204ENST00000466100 TRMT112Q9UI30 125 aaKnown RBP14.03□□□□□ -0.16
VCP-204ENST00000466100 SH3TC1Q8TE82 1336 aa14.03□□□□□ -0.16
VCP-204ENST00000466100 C10orf71Q711Q0 1435 aa14.02□□□□□ -0.16
VCP-204ENST00000466100 FAM177BA6PVY3 158 aa14.02□□□□□ -0.17
VCP-204ENST00000466100 SERPINB2P05120 415 aa14.02□□□□□ -0.17
VCP-204ENST00000466100 ERFEQ4G0M1 354 aa14.02□□□□□ -0.17
VCP-204ENST00000466100 PRR5LQ6MZQ0 368 aa14.02□□□□□ -0.17
VCP-204ENST00000466100 NUTM1Q86Y26 1132 aa14.02□□□□□ -0.17
VCP-204ENST00000466100 PLA2G12BQ9BX93 195 aa14.02□□□□□ -0.17
VCP-204ENST00000466100 TAF1P21675 1872 aa14.01□□□□□ -0.17
VCP-204ENST00000466100 UBTFL1P0CB47 393 aaPredicted RBP14.01□□□□□ -0.17
VCP-204ENST00000466100 RTL5Q5HYW3 569 aaPredicted RBP14.01□□□□□ -0.17
VCP-204ENST00000466100 EPHA10Q5JZY3 1008 aa14.01□□□□□ -0.17
VCP-204ENST00000466100 SLC10A5Q5PT55 438 aa14.01□□□□□ -0.17
VCP-204ENST00000466100 CNBD1Q8NA66 436 aa14.01□□□□□ -0.17
VCP-204ENST00000466100 LRRFIP2Q9Y608 721 aaKnown RBP14.01□□□□□ -0.17
VCP-204ENST00000466100 COL4A1P02462 1669 aa14.01□□□□□ -0.17
VCP-204ENST00000466100 SPEF2Q9C093 1822 aa14□□□□□ -0.17
VCP-204ENST00000466100 IRS4O14654 1257 aaPredicted RBP14□□□□□ -0.17
VCP-204ENST00000466100 GNAI2P04899 355 aa14□□□□□ -0.17
VCP-204ENST00000466100 NEFLP07196 543 aa14□□□□□ -0.17
VCP-204ENST00000466100 FOXO4P98177 505 aa14□□□□□ -0.17
VCP-204ENST00000466100 AAMPQ13685 434 aa14□□□□□ -0.17
VCP-204ENST00000466100 RABL6Q3YEC7 729 aaPredicted RBP14□□□□□ -0.17
VCP-204ENST00000466100 TPTE2Q6XPS3 522 aa14□□□□□ -0.17
VCP-204ENST00000466100 ANKRD44Q8N8A2 993 aa14□□□□□ -0.17
VCP-204ENST00000466100 CHMP4BQ9H444 224 aaKnown RBP14□□□□□ -0.17
VCP-204ENST00000466100 C1orf115Q9H7X2 142 aa14□□□□□ -0.17
VCP-204ENST00000466100 PARP3Q9Y6F1 533 aa14□□□□□ -0.17
VCP-204ENST00000466100 LRP5O75197 1615 aa14□□□□□ -0.17
VCP-204ENST00000466100 BRCA1P38398 1863 aaKnown RBP13.99□□□□□ -0.17
VCP-204ENST00000466100 HCLS1P14317 486 aaPredicted RBP13.99□□□□□ -0.17
VCP-204ENST00000466100 PTGER2P43116 358 aa13.99□□□□□ -0.17
VCP-204ENST00000466100 BICC1Q9H694 974 aaKnown RBP13.99□□□□□ -0.17
VCP-204ENST00000466100 ATF5Q9Y2D1 282 aaPredicted RBP13.99□□□□□ -0.17
VCP-204ENST00000466100 A0A1B0GUL6 1792 aa13.99□□□□□ -0.17
VCP-204ENST00000466100 CACNA1SQ13698 1873 aa13.98□□□□□ -0.17
VCP-204ENST00000466100 MTX1Q13505 466 aa13.98□□□□□ -0.17
VCP-204ENST00000466100 CEP85Q6P2H3 762 aa13.98□□□□□ -0.17
VCP-204ENST00000466100 C3orf67Q6ZVT6 689 aa13.98□□□□□ -0.17
VCP-204ENST00000466100 CCDC24Q8N4L8 307 aa13.98□□□□□ -0.17
VCP-204ENST00000466100 PCDHB15Q9Y5E8 787 aa13.98□□□□□ -0.17
VCP-204ENST00000466100 RTL9Q8NET4 1388 aa13.97□□□□□ -0.17
VCP-204ENST00000466100 KLRG2A4D1S0 409 aaPredicted RBP13.97□□□□□ -0.17
VCP-204ENST00000466100 PDE8AO60658 829 aa13.97□□□□□ -0.17
VCP-204ENST00000466100 CSF1RP07333 972 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms