RNA–Protein interactions for RNA: ENST00000465937.1

LIMK2-207, Transcript of LIM domain kinase 2, humanhuman

TSL 3

Gene LIMK2, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-207ENST00000465937 NPR1P16066 1061 aa17.17■□□□□ 0.34
LIMK2-207ENST00000465937 EXOSC9Q06265 439 aaKnown RBP17.17■□□□□ 0.34
LIMK2-207ENST00000465937 ARHGAP27Q6ZUM4 889 aa17.17■□□□□ 0.34
LIMK2-207ENST00000465937 MIER1Q8N108 512 aa17.17■□□□□ 0.34
LIMK2-207ENST00000465937 ZNF784Q8NCA9 323 aaPredicted RBP17.17■□□□□ 0.34
LIMK2-207ENST00000465937 CNKSR1Q969H4 720 aa17.17■□□□□ 0.34
LIMK2-207ENST00000465937 MYH16Q9H6N6 1097 aa17.17■□□□□ 0.34
LIMK2-207ENST00000465937 SBF1O95248 1867 aa17.16■□□□□ 0.34
LIMK2-207ENST00000465937 NPHP1O15259 732 aa17.16■□□□□ 0.34
LIMK2-207ENST00000465937 HOXA10P31260 410 aaPredicted RBP17.16■□□□□ 0.34
LIMK2-207ENST00000465937 ZNF622Q969S3 477 aaKnown RBP eCLIP17.16■□□□□ 0.34
LIMK2-207ENST00000465937 UTP14AQ9BVJ6 771 aaKnown RBP17.16■□□□□ 0.34
LIMK2-207ENST00000465937 GTF2E1P29083 439 aaPredicted RBP17.14■□□□□ 0.33
LIMK2-207ENST00000465937 C3orf67Q6ZVT6 689 aa17.14■□□□□ 0.33
LIMK2-207ENST00000465937 TRMT2AQ8IZ69 625 aaKnown RBP17.14■□□□□ 0.33
LIMK2-207ENST00000465937 FER1L6Q2WGJ9 1857 aa17.14■□□□□ 0.33
LIMK2-207ENST00000465937 NFKBIEO00221 500 aa17.13■□□□□ 0.33
LIMK2-207ENST00000465937 PRELPP51888 382 aa17.13■□□□□ 0.33
LIMK2-207ENST00000465937 SLFN5Q08AF3 891 aa17.13■□□□□ 0.33
LIMK2-207ENST00000465937 PRPF40BQ6NWY9 871 aaKnown RBP17.13■□□□□ 0.33
LIMK2-207ENST00000465937 G2E3Q7L622 706 aa17.13■□□□□ 0.33
LIMK2-207ENST00000465937 METTL22Q9BUU2 404 aaPredicted RBP17.13■□□□□ 0.33
LIMK2-207ENST00000465937 SLC4A2P04920 1241 aa17.12■□□□□ 0.33
LIMK2-207ENST00000465937 KSR2Q6VAB6 950 aa17.12■□□□□ 0.33
LIMK2-207ENST00000465937 RIC3Q7Z5B4 369 aa17.12■□□□□ 0.33
LIMK2-207ENST00000465937 SYNE4Q8N205 404 aa17.12■□□□□ 0.33
LIMK2-207ENST00000465937 STK31Q9BXU1 1019 aa17.12■□□□□ 0.33
LIMK2-207ENST00000465937 LTBP3Q9NS15 1303 aa17.12■□□□□ 0.33
LIMK2-207ENST00000465937 SNED1Q8TER0 1413 aa17.12■□□□□ 0.33
LIMK2-207ENST00000465937 E9PSI1 815 aa17.11■□□□□ 0.33
LIMK2-207ENST00000465937 ATP5J2-PTCD1G3V325 749 aa17.11■□□□□ 0.33
LIMK2-207ENST00000465937 TCERG1O14776 1098 aaKnown RBP17.11■□□□□ 0.33
LIMK2-207ENST00000465937 C21orf2O43822 256 aa17.11■□□□□ 0.33
LIMK2-207ENST00000465937 DDX58O95786 925 aaKnown RBP17.11■□□□□ 0.33
LIMK2-207ENST00000465937 ALDH1B1P30837 517 aa17.11■□□□□ 0.33
LIMK2-207ENST00000465937 CRAMP1Q96RY5 1269 aa17.11■□□□□ 0.33
LIMK2-207ENST00000465937 SH3TC1Q8TE82 1336 aa17.11■□□□□ 0.33
LIMK2-207ENST00000465937 LAMB2P55268 1798 aa17.1■□□□□ 0.33
LIMK2-207ENST00000465937 CACNA1SQ13698 1873 aa17.1■□□□□ 0.33
LIMK2-207ENST00000465937 PI4KAP2A4QPH2 592 aa17.1■□□□□ 0.33
LIMK2-207ENST00000465937 C9orf131Q5VYM1 1079 aa17.1■□□□□ 0.33
LIMK2-207ENST00000465937 PI4KAP1Q8N8J0 262 aa17.1■□□□□ 0.33
LIMK2-207ENST00000465937 CCDC191Q8NCU4 936 aa17.1■□□□□ 0.33
LIMK2-207ENST00000465937 NLRP3Q96P20 1036 aa17.1■□□□□ 0.33
LIMK2-207ENST00000465937 TRMT112Q9UI30 125 aaKnown RBP17.1■□□□□ 0.33
LIMK2-207ENST00000465937 DDX60Q8IY21 1712 aaKnown RBP17.1■□□□□ 0.33
LIMK2-207ENST00000465937 IGKV5-2P06315 115 aa17.09■□□□□ 0.33
LIMK2-207ENST00000465937 FLIIQ13045 1269 aa17.09■□□□□ 0.33
LIMK2-207ENST00000465937 SOGA3Q5TF21 947 aa17.09■□□□□ 0.33
LIMK2-207ENST00000465937 MAP3K2Q9Y2U5 619 aa17.09■□□□□ 0.33
LIMK2-207ENST00000465937 HCLS1P14317 486 aaPredicted RBP17.08■□□□□ 0.32
LIMK2-207ENST00000465937 RASSF7Q02833 373 aa17.08■□□□□ 0.32
LIMK2-207ENST00000465937 SF3B3Q15393 1217 aaKnown RBP17.08■□□□□ 0.32
LIMK2-207ENST00000465937 ZBTB38Q8NAP3 1195 aaPredicted RBP17.08■□□□□ 0.32
LIMK2-207ENST00000465937 CDCA7LQ96GN5 454 aa17.08■□□□□ 0.32
LIMK2-207ENST00000465937 MYD88Q99836 296 aa17.08■□□□□ 0.32
LIMK2-207ENST00000465937 CCDC88AQ3V6T2 1871 aa17.07■□□□□ 0.32
LIMK2-207ENST00000465937 LMNB1P20700 586 aa17.07■□□□□ 0.32
LIMK2-207ENST00000465937 FAM89AQ96GI7 184 aa17.07■□□□□ 0.32
LIMK2-207ENST00000465937 DICER1Q9UPY3 1922 aaKnown RBP17.06■□□□□ 0.32
LIMK2-207ENST00000465937 ZC3H4Q9UPT8 1303 aaKnown RBP17.06■□□□□ 0.32
LIMK2-207ENST00000465937 PCCAP05165 728 aaPredicted RBP17.06■□□□□ 0.32
LIMK2-207ENST00000465937 RPGRQ92834 1020 aaKnown RBP17.06■□□□□ 0.32
LIMK2-207ENST00000465937 RBM17Q96I25 401 aaKnown RBP17.06■□□□□ 0.32
LIMK2-207ENST00000465937 CCDC93Q567U6 631 aa17.05■□□□□ 0.32
LIMK2-207ENST00000465937 CC2D2BQ6DHV5 1058 aa17.05■□□□□ 0.32
LIMK2-207ENST00000465937 CWC25Q9NXE8 425 aaPredicted RBP17.05■□□□□ 0.32
LIMK2-207ENST00000465937 RNF181Q9P0P0 153 aa17.05■□□□□ 0.32
LIMK2-207ENST00000465937 NEURL1BA8MQ27 555 aa17.04■□□□□ 0.32
LIMK2-207ENST00000465937 IRS4O14654 1257 aaPredicted RBP17.04■□□□□ 0.32
LIMK2-207ENST00000465937 OLFM4Q6UX06 510 aa17.04■□□□□ 0.32
LIMK2-207ENST00000465937 RTKN2Q8IZC4 609 aa17.04■□□□□ 0.32
LIMK2-207ENST00000465937 ZNF428Q96B54 188 aa17.04■□□□□ 0.32
LIMK2-207ENST00000465937 TAOK3Q9H2K8 898 aa17.04■□□□□ 0.32
LIMK2-207ENST00000465937 ZNF219Q9P2Y4 722 aaPredicted RBP17.04■□□□□ 0.32
LIMK2-207ENST00000465937 ABCC4O15439 1325 aa17.03■□□□□ 0.32
LIMK2-207ENST00000465937 CDHR2Q9BYE9 1310 aa17.03■□□□□ 0.32
LIMK2-207ENST00000465937 BBOX1O75936 387 aa17.03■□□□□ 0.32
LIMK2-207ENST00000465937 GRIPAP1Q4V328 841 aa17.03■□□□□ 0.32
LIMK2-207ENST00000465937 DNAAF4Q8WXU2 420 aa17.03■□□□□ 0.32
LIMK2-207ENST00000465937 PSMD1Q99460 953 aa17.03■□□□□ 0.32
LIMK2-207ENST00000465937 H7C1W4 665 aa17.02■□□□□ 0.32
LIMK2-207ENST00000465937 FKBP4Q02790 459 aaKnown RBP eCLIP17.02■□□□□ 0.32
LIMK2-207ENST00000465937 FKBP5Q13451 457 aaPredicted RBP17.02■□□□□ 0.32
LIMK2-207ENST00000465937 MRPL50Q8N5N7 158 aaKnown RBP17.02■□□□□ 0.32
LIMK2-207ENST00000465937 ATP6V0A2Q9Y487 856 aa17.02■□□□□ 0.32
LIMK2-207ENST00000465937 TAF1P21675 1872 aa17.01■□□□□ 0.31
LIMK2-207ENST00000465937 CT47B1P0C2W7 299 aaPredicted RBP17.01■□□□□ 0.31
LIMK2-207ENST00000465937 HSP90B1P14625 803 aaKnown RBP17.01■□□□□ 0.31
LIMK2-207ENST00000465937 CASP7P55210 303 aa17.01■□□□□ 0.31
LIMK2-207ENST00000465937 NEXNQ0ZGT2 675 aa17.01■□□□□ 0.31
LIMK2-207ENST00000465937 GRAPQ13588 217 aa17.01■□□□□ 0.31
LIMK2-207ENST00000465937 CWF19L2Q2TBE0 894 aaKnown RBP17.01■□□□□ 0.31
LIMK2-207ENST00000465937 SLC51AQ86UW1 340 aa17.01■□□□□ 0.31
LIMK2-207ENST00000465937 LINS1Q8NG48 757 aa17.01■□□□□ 0.31
LIMK2-207ENST00000465937 GRAPLQ8TC17 118 aaPredicted RBP17.01■□□□□ 0.31
LIMK2-207ENST00000465937 PPEF1O14829 653 aaPredicted RBP17■□□□□ 0.31
LIMK2-207ENST00000465937 PDE8AO60658 829 aa17■□□□□ 0.31
LIMK2-207ENST00000465937 GCKRQ14397 625 aa17■□□□□ 0.31
LIMK2-207ENST00000465937 BEND3Q5T5X7 828 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms