RNA–Protein interactions for RNA: ENST00000465522.5

ITGA4-204, Transcript of integrin subunit alpha 4, humanhuman

TSL 2

Gene ITGA4, Length 1,721 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-204ENST00000465522 ADRA2BP18089 450 aa27.06■■□□□ 1.92
ITGA4-204ENST00000465522 RFC4P35249 363 aa27.06■■□□□ 1.92
ITGA4-204ENST00000465522 BICC1Q9H694 974 aaKnown RBP27.06■■□□□ 1.92
ITGA4-204ENST00000465522 DCTPP1Q9H773 170 aa27.06■■□□□ 1.92
ITGA4-204ENST00000465522 USPL1Q5W0Q7 1092 aa27.05■■□□□ 1.92
ITGA4-204ENST00000465522 UBR3Q6ZT12 1888 aa27.05■■□□□ 1.92
ITGA4-204ENST00000465522 RGPD3A6NKT7 1758 aaPredicted RBP27.05■■□□□ 1.92
ITGA4-204ENST00000465522 BCORQ6W2J9 1755 aa27.05■■□□□ 1.92
ITGA4-204ENST00000465522 RGPD4Q7Z3J3 1758 aa27.05■■□□□ 1.92
ITGA4-204ENST00000465522 SRGAP3O43295 1099 aa27.04■■□□□ 1.92
ITGA4-204ENST00000465522 PCCAP05165 728 aaPredicted RBP27.04■■□□□ 1.92
ITGA4-204ENST00000465522 ZBTB38Q8NAP3 1195 aaPredicted RBP27.04■■□□□ 1.92
ITGA4-204ENST00000465522 NIP7Q9Y221 180 aaKnown RBP eCLIP27.04■■□□□ 1.92
ITGA4-204ENST00000465522 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.04■■□□□ 1.92
ITGA4-204ENST00000465522 EN1Q05925 392 aaPredicted RBP27.04■■□□□ 1.92
ITGA4-204ENST00000465522 MTX1Q13505 466 aa27.04■■□□□ 1.92
ITGA4-204ENST00000465522 SSH3Q8TE77 659 aa27.04■■□□□ 1.92
ITGA4-204ENST00000465522 SRP68Q9UHB9 627 aaKnown RBP27.04■■□□□ 1.92
ITGA4-204ENST00000465522 UBN2Q6ZU65 1347 aa27.03■■□□□ 1.92
ITGA4-204ENST00000465522 SSFA2P28290 1259 aa27.03■■□□□ 1.92
ITGA4-204ENST00000465522 PARP10Q53GL7 1025 aa27.03■■□□□ 1.92
ITGA4-204ENST00000465522 PELP1Q8IZL8 1130 aaKnown RBP27.03■■□□□ 1.92
ITGA4-204ENST00000465522 FAM89AQ96GI7 184 aa27.03■■□□□ 1.92
ITGA4-204ENST00000465522 TRMT112Q9UI30 125 aaKnown RBP27.03■■□□□ 1.92
ITGA4-204ENST00000465522 CAMKK2Q96RR4 588 aa27.02■■□□□ 1.92
ITGA4-204ENST00000465522 POLA2Q14181 598 aa27.02■■□□□ 1.92
ITGA4-204ENST00000465522 EZH2Q15910 746 aaKnown RBP27.02■■□□□ 1.92
ITGA4-204ENST00000465522 EPHA10Q5JZY3 1008 aa27.02■■□□□ 1.92
ITGA4-204ENST00000465522 PDZRN3Q9UPQ7 1066 aa27.02■■□□□ 1.92
ITGA4-204ENST00000465522 BCL2L12Q9HB09 334 aa27.01■■□□□ 1.91
ITGA4-204ENST00000465522 TFCP2L1Q9NZI6 479 aa27.01■■□□□ 1.91
ITGA4-204ENST00000465522 BAG6P46379 1132 aa27■■□□□ 1.91
ITGA4-204ENST00000465522 SUSD4Q5VX71 490 aa27■■□□□ 1.91
ITGA4-204ENST00000465522 AKT1S1Q96B36 256 aa27■■□□□ 1.91
ITGA4-204ENST00000465522 USP42Q9H9J4 1324 aaKnown RBP27■■□□□ 1.91
ITGA4-204ENST00000465522 SCN7AQ01118 1682 aa26.99■■□□□ 1.91
ITGA4-204ENST00000465522 ANKRD45Q5TZF3 282 aa26.99■■□□□ 1.91
ITGA4-204ENST00000465522 UTP14AQ9BVJ6 771 aaKnown RBP26.99■■□□□ 1.91
ITGA4-204ENST00000465522 C4AP0C0L4 1744 aa26.98■■□□□ 1.91
ITGA4-204ENST00000465522 FAM177BA6PVY3 158 aa26.98■■□□□ 1.91
ITGA4-204ENST00000465522 FOXO4P98177 505 aa26.98■■□□□ 1.91
ITGA4-204ENST00000465522 ZNF827Q17R98 1081 aa26.98■■□□□ 1.91
ITGA4-204ENST00000465522 RABL6Q3YEC7 729 aaPredicted RBP26.98■■□□□ 1.91
ITGA4-204ENST00000465522 SKAP1Q86WV1 359 aa26.98■■□□□ 1.91
ITGA4-204ENST00000465522 NUCB1Q02818 461 aa26.97■■□□□ 1.91
ITGA4-204ENST00000465522 TBC1D9BQ66K14 1250 aa26.97■■□□□ 1.91
ITGA4-204ENST00000465522 BICDL1Q6ZP65 573 aa26.97■■□□□ 1.91
ITGA4-204ENST00000465522 CDHR2Q9BYE9 1310 aa26.97■■□□□ 1.91
ITGA4-204ENST00000465522 LMBR1LQ6UX01 489 aa26.96■■□□□ 1.91
ITGA4-204ENST00000465522 SYNE4Q8N205 404 aa26.96■■□□□ 1.91
ITGA4-204ENST00000465522 SETDB2Q96T68 719 aa26.96■■□□□ 1.91
ITGA4-204ENST00000465522 EXOC6BQ9Y2D4 811 aa26.96■■□□□ 1.91
ITGA4-204ENST00000465522 ZBTB47Q9UFB7 747 aaPredicted RBP26.96■■□□□ 1.91
ITGA4-204ENST00000465522 SH3TC1Q8TE82 1336 aa26.95■■□□□ 1.9
ITGA4-204ENST00000465522 IRS4O14654 1257 aaPredicted RBP26.95■■□□□ 1.9
ITGA4-204ENST00000465522 SURF6O75683 361 aaKnown RBP26.95■■□□□ 1.9
ITGA4-204ENST00000465522 CHD1LQ86WJ1 897 aa26.95■■□□□ 1.9
ITGA4-204ENST00000465522 CCDC125Q86Z20 511 aa26.95■■□□□ 1.9
ITGA4-204ENST00000465522 PLA2G12BQ9BX93 195 aa26.95■■□□□ 1.9
ITGA4-204ENST00000465522 APBB1O00213 710 aa26.94■■□□□ 1.9
ITGA4-204ENST00000465522 DEFB132Q7Z7B7 95 aa26.94■■□□□ 1.9
ITGA4-204ENST00000465522 RGS3P49796 1198 aa26.93■■□□□ 1.9
ITGA4-204ENST00000465522 FLAD1Q8NFF5 587 aa26.93■■□□□ 1.9
ITGA4-204ENST00000465522 CHMP3Q9Y3E7 222 aa26.93■■□□□ 1.9
ITGA4-204ENST00000465522 NTSR2O95665 410 aa26.93■■□□□ 1.9
ITGA4-204ENST00000465522 LNPKQ9C0E8 428 aa26.93■■□□□ 1.9
ITGA4-204ENST00000465522 GYS1P13807 737 aa26.91■■□□□ 1.9
ITGA4-204ENST00000465522 HSP90AB4PQ58FF6 505 aa26.91■■□□□ 1.9
ITGA4-204ENST00000465522 MSH5O43196 834 aa26.9■■□□□ 1.9
ITGA4-204ENST00000465522 PDE8AO60658 829 aa26.9■■□□□ 1.9
ITGA4-204ENST00000465522 HSP90B1P14625 803 aaKnown RBP26.9■■□□□ 1.9
ITGA4-204ENST00000465522 NOP58Q9Y2X3 529 aaKnown RBP26.9■■□□□ 1.9
ITGA4-204ENST00000465522 RAB11FIP3O75154 756 aa26.9■■□□□ 1.9
ITGA4-204ENST00000465522 NUTM1Q86Y26 1132 aa26.9■■□□□ 1.9
ITGA4-204ENST00000465522 NYXQ9GZU5 481 aa26.9■■□□□ 1.9
ITGA4-204ENST00000465522 PA2G4Q9UQ80 394 aaKnown RBP26.9■■□□□ 1.9
ITGA4-204ENST00000465522 CSF1RP07333 972 aa26.89■■□□□ 1.9
ITGA4-204ENST00000465522 GTF2E1P29083 439 aaPredicted RBP26.89■■□□□ 1.9
ITGA4-204ENST00000465522 COL23A1Q86Y22 540 aaPredicted RBP26.89■■□□□ 1.9
ITGA4-204ENST00000465522 LRRCC1Q9C099 1032 aa26.89■■□□□ 1.9
ITGA4-204ENST00000465522 HCLS1P14317 486 aaPredicted RBP26.88■■□□□ 1.89
ITGA4-204ENST00000465522 OS9Q13438 667 aaPredicted RBP26.88■■□□□ 1.89
ITGA4-204ENST00000465522 STK32BQ9NY57 414 aa26.88■■□□□ 1.89
ITGA4-204ENST00000465522 MYH3P11055 1940 aa26.88■■□□□ 1.89
ITGA4-204ENST00000465522 RFX5P48382 616 aaPredicted RBP26.87■■□□□ 1.89
ITGA4-204ENST00000465522 SLC15A2Q16348 729 aa26.87■■□□□ 1.89
ITGA4-204ENST00000465522 TPTE2Q6XPS3 522 aa26.87■■□□□ 1.89
ITGA4-204ENST00000465522 NBPF5PQ86XG9 351 aaPredicted RBP26.87■■□□□ 1.89
ITGA4-204ENST00000465522 BCL11AQ9H165 835 aa26.87■■□□□ 1.89
ITGA4-204ENST00000465522 TUBGCP6Q96RT7 1819 aa26.87■■□□□ 1.89
ITGA4-204ENST00000465522 CTSWP56202 376 aa26.87■■□□□ 1.89
ITGA4-204ENST00000465522 G3BP1Q13283 466 aaKnown RBP eCLIP26.87■■□□□ 1.89
ITGA4-204ENST00000465522 NFIXQ14938 502 aa26.87■■□□□ 1.89
ITGA4-204ENST00000465522 TTLL11Q8NHH1 800 aa26.87■■□□□ 1.89
ITGA4-204ENST00000465522 COPRSQ9NQ92 184 aa26.87■■□□□ 1.89
ITGA4-204ENST00000465522 SMARCA5O60264 1052 aaPredicted RBP26.86■■□□□ 1.89
ITGA4-204ENST00000465522 PTPN12Q05209 780 aaKnown RBP26.86■■□□□ 1.89
ITGA4-204ENST00000465522 CCDC57Q2TAC2 916 aa26.86■■□□□ 1.89
ITGA4-204ENST00000465522 KLHDC4Q8TBB5 520 aa26.86■■□□□ 1.89
ITGA4-204ENST00000465522 ANO8Q9HCE9 1232 aaPredicted RBP26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms