RNA–Protein interactions for RNA: ENST00000465315.1

CCDC115-204, Transcript of coiled-coil domain containing 115, humanhuman

TSL 2

Gene CCDC115, Length 3,562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-204ENST00000465315 HYPKQ9NX55 129 aa13.61□□□□□ -0.23
CCDC115-204ENST00000465315 KRT85P78386 507 aa13.6□□□□□ -0.23
CCDC115-204ENST00000465315 DDX46Q7L014 1031 aaKnown RBP13.6□□□□□ -0.23
CCDC115-204ENST00000465315 NOL7Q9UMY1 257 aaKnown RBP13.6□□□□□ -0.23
CCDC115-204ENST00000465315 KNDC1Q76NI1 1749 aa13.6□□□□□ -0.23
CCDC115-204ENST00000465315 KDM4AO75164 1064 aa13.6□□□□□ -0.23
CCDC115-204ENST00000465315 GIGYF1O75420 1035 aaPredicted RBP13.6□□□□□ -0.23
CCDC115-204ENST00000465315 UBE2HP62256 183 aa13.6□□□□□ -0.23
CCDC115-204ENST00000465315 PRDM10Q9NQV6 1147 aa13.6□□□□□ -0.23
CCDC115-204ENST00000465315 KDRP35968 1356 aa13.6□□□□□ -0.23
CCDC115-204ENST00000465315 TECPR2O15040 1411 aa13.6□□□□□ -0.23
CCDC115-204ENST00000465315 TATP17735 454 aaPredicted RBP13.6□□□□□ -0.23
CCDC115-204ENST00000465315 KRT28Q7Z3Y7 464 aa13.6□□□□□ -0.23
CCDC115-204ENST00000465315 CCDC129Q6ZRS4 1044 aa13.59□□□□□ -0.23
CCDC115-204ENST00000465315 LINS1Q8NG48 757 aa13.59□□□□□ -0.23
CCDC115-204ENST00000465315 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.59□□□□□ -0.23
CCDC115-204ENST00000465315 SALL3Q9BXA9 1300 aa13.59□□□□□ -0.23
CCDC115-204ENST00000465315 C3P01024 1663 aa13.59□□□□□ -0.23
CCDC115-204ENST00000465315 KDM4FA0A1W2PPD8 638 aa13.59□□□□□ -0.23
CCDC115-204ENST00000465315 RRP9O43818 475 aaKnown RBP13.59□□□□□ -0.23
CCDC115-204ENST00000465315 POLA2Q14181 598 aa13.59□□□□□ -0.23
CCDC115-204ENST00000465315 ME3Q16798 604 aa13.59□□□□□ -0.23
CCDC115-204ENST00000465315 LARP1Q6PKG0 1096 aaKnown RBP13.59□□□□□ -0.23
CCDC115-204ENST00000465315 ZSCAN31Q96LW9 406 aaPredicted RBP13.59□□□□□ -0.23
CCDC115-204ENST00000465315 CCDC171Q6TFL3 1326 aa13.59□□□□□ -0.23
CCDC115-204ENST00000465315 TTC41PQ6P2S7 1318 aa13.58□□□□□ -0.23
CCDC115-204ENST00000465315 A0A087WZG4 1122 aa13.58□□□□□ -0.24
CCDC115-204ENST00000465315 FAM177BA6PVY3 158 aa13.58□□□□□ -0.24
CCDC115-204ENST00000465315 SPATA32Q96LK8 384 aa13.58□□□□□ -0.24
CCDC115-204ENST00000465315 A0A0D9SFI3 127 aa13.58□□□□□ -0.24
CCDC115-204ENST00000465315 GUCY1B3Q02153 619 aa13.58□□□□□ -0.24
CCDC115-204ENST00000465315 HIP1O00291 1037 aa13.57□□□□□ -0.24
CCDC115-204ENST00000465315 ALDH1L1O75891 902 aa13.57□□□□□ -0.24
CCDC115-204ENST00000465315 ITSN1Q15811 1721 aa13.57□□□□□ -0.24
CCDC115-204ENST00000465315 AOX1Q06278 1338 aa13.57□□□□□ -0.24
CCDC115-204ENST00000465315 UBE2Q2Q8WVN8 375 aa13.57□□□□□ -0.24
CCDC115-204ENST00000465315 TNMDQ9H2S6 317 aa13.57□□□□□ -0.24
CCDC115-204ENST00000465315 CCDC192P0DO97 292 aa13.57□□□□□ -0.24
CCDC115-204ENST00000465315 ZRSR1Q15695 479 aaKnown RBP13.57□□□□□ -0.24
CCDC115-204ENST00000465315 NUP62CLQ9H1M0 184 aa13.57□□□□□ -0.24
CCDC115-204ENST00000465315 SH2B1Q9NRF2 756 aaPredicted RBP13.57□□□□□ -0.24
CCDC115-204ENST00000465315 BABAM1Q9NWV8 329 aa13.57□□□□□ -0.24
CCDC115-204ENST00000465315 TPCN1Q9ULQ1 816 aa13.57□□□□□ -0.24
CCDC115-204ENST00000465315 CABP4P57796 275 aa13.56□□□□□ -0.24
CCDC115-204ENST00000465315 CHAF1AQ13111 956 aaPredicted RBP13.56□□□□□ -0.24
CCDC115-204ENST00000465315 TAF7LQ5H9L4 462 aa13.56□□□□□ -0.24
CCDC115-204ENST00000465315 ANKRD13DQ6ZTN6 518 aa13.56□□□□□ -0.24
CCDC115-204ENST00000465315 TSC1Q92574 1164 aa13.56□□□□□ -0.24
CCDC115-204ENST00000465315 PDCP20941 246 aa13.56□□□□□ -0.24
CCDC115-204ENST00000465315 CCT2P78371 535 aaKnown RBP13.56□□□□□ -0.24
CCDC115-204ENST00000465315 CDC37L1Q7L3B6 337 aa13.56□□□□□ -0.24
CCDC115-204ENST00000465315 TRIM5Q9C035 493 aa13.56□□□□□ -0.24
CCDC115-204ENST00000465315 AXIN2Q9Y2T1 843 aa13.56□□□□□ -0.24
CCDC115-204ENST00000465315 SLC27A2O14975 620 aa13.56□□□□□ -0.24
CCDC115-204ENST00000465315 TFCP2Q12800 502 aa13.56□□□□□ -0.24
CCDC115-204ENST00000465315 VPS53Q5VIR6 699 aa13.56□□□□□ -0.24
CCDC115-204ENST00000465315 DDX21Q9NR30 783 aaKnown RBP eCLIP13.56□□□□□ -0.24
CCDC115-204ENST00000465315 SASH1O94885 1247 aa13.55□□□□□ -0.24
CCDC115-204ENST00000465315 LETM1O95202 739 aaPredicted RBP13.55□□□□□ -0.24
CCDC115-204ENST00000465315 CHGBP05060 677 aa13.55□□□□□ -0.24
CCDC115-204ENST00000465315 SASS6Q6UVJ0 657 aa13.55□□□□□ -0.24
CCDC115-204ENST00000465315 SEC62Q99442 399 aaKnown RBP13.55□□□□□ -0.24
CCDC115-204ENST00000465315 WASHC4Q2M389 1173 aa13.55□□□□□ -0.24
CCDC115-204ENST00000465315 ZNF790Q6PG37 636 aa13.55□□□□□ -0.24
CCDC115-204ENST00000465315 CHST3Q7LGC8 479 aa13.55□□□□□ -0.24
CCDC115-204ENST00000465315 ZNF496Q96IT1 587 aaPredicted RBP13.55□□□□□ -0.24
CCDC115-204ENST00000465315 MTMR6Q9Y217 621 aa13.55□□□□□ -0.24
CCDC115-204ENST00000465315 USP16Q9Y5T5 823 aa13.55□□□□□ -0.24
CCDC115-204ENST00000465315 SSH2Q76I76 1423 aa13.55□□□□□ -0.24
CCDC115-204ENST00000465315 ADCY9O60503 1353 aa13.55□□□□□ -0.24
CCDC115-204ENST00000465315 GOLIM4O00461 696 aa13.55□□□□□ -0.24
CCDC115-204ENST00000465315 FKBP4Q02790 459 aaKnown RBP eCLIP13.55□□□□□ -0.24
CCDC115-204ENST00000465315 ZBTB3Q9H5J0 574 aa13.55□□□□□ -0.24
CCDC115-204ENST00000465315 DACT1Q9NYF0 836 aa13.55□□□□□ -0.24
CCDC115-204ENST00000465315 GOLGA6L6A8MZA4 724 aa13.54□□□□□ -0.24
CCDC115-204ENST00000465315 MAP3K11Q16584 847 aa13.54□□□□□ -0.24
CCDC115-204ENST00000465315 RAB11FIP4Q86YS3 637 aa13.54□□□□□ -0.24
CCDC115-204ENST00000465315 BRF1Q92994 677 aa13.54□□□□□ -0.24
CCDC115-204ENST00000465315 SNRKQ9NRH2 765 aa13.54□□□□□ -0.24
CCDC115-204ENST00000465315 NPHP4O75161 1426 aaPredicted RBP13.54□□□□□ -0.24
CCDC115-204ENST00000465315 JAK2O60674 1132 aa13.54□□□□□ -0.24
CCDC115-204ENST00000465315 ZNF589Q86UQ0 364 aaPredicted RBP13.54□□□□□ -0.24
CCDC115-204ENST00000465315 ZNF592Q92610 1267 aa13.54□□□□□ -0.24
CCDC115-204ENST00000465315 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.54□□□□□ -0.24
CCDC115-204ENST00000465315 HOXB7P09629 217 aa13.53□□□□□ -0.24
CCDC115-204ENST00000465315 LMBR1LQ6UX01 489 aa13.53□□□□□ -0.24
CCDC115-204ENST00000465315 DBNDD2Q9BQY9 259 aa13.53□□□□□ -0.24
CCDC115-204ENST00000465315 TAF6LQ9Y6J9 622 aa13.53□□□□□ -0.24
CCDC115-204ENST00000465315 ANKRD1Q15327 319 aa13.53□□□□□ -0.24
CCDC115-204ENST00000465315 TTC14Q96N46 770 aa13.53□□□□□ -0.24
CCDC115-204ENST00000465315 NRKQ7Z2Y5 1582 aa13.53□□□□□ -0.24
CCDC115-204ENST00000465315 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.53□□□□□ -0.24
CCDC115-204ENST00000465315 SF3A1Q15459 793 aaKnown RBP13.53□□□□□ -0.24
CCDC115-204ENST00000465315 SLFNL1Q499Z3 407 aa13.53□□□□□ -0.24
CCDC115-204ENST00000465315 HS1BP3Q53T59 392 aa13.53□□□□□ -0.24
CCDC115-204ENST00000465315 EPHA10Q5JZY3 1008 aa13.53□□□□□ -0.24
CCDC115-204ENST00000465315 GOLGA6L19H0YKK7 550 aa13.52□□□□□ -0.24
CCDC115-204ENST00000465315 LUZP1Q86V48 1076 aa13.52□□□□□ -0.24
CCDC115-204ENST00000465315 BECN2A8MW95 431 aa13.52□□□□□ -0.25
CCDC115-204ENST00000465315 TIMM10P62072 90 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms