RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 CA12O43570 354 aa20.29■□□□□ 0.84
HDAC6-214ENST00000465269 HLFQ16534 295 aa20.29■□□□□ 0.84
HDAC6-214ENST00000465269 ALDH1B1P30837 517 aa20.28■□□□□ 0.84
HDAC6-214ENST00000465269 NUTM1Q86Y26 1132 aa20.28■□□□□ 0.84
HDAC6-214ENST00000465269 NBPF26B4DH59 902 aa20.27■□□□□ 0.84
HDAC6-214ENST00000465269 NBPF10Q6P3W6 841 aaKnown RBP20.27■□□□□ 0.84
HDAC6-214ENST00000465269 CLEC4GQ6UXB4 293 aa20.27■□□□□ 0.84
HDAC6-214ENST00000465269 NBPF15Q8N660 670 aa20.27■□□□□ 0.84
HDAC6-214ENST00000465269 ZNF652Q9Y2D9 606 aa20.27■□□□□ 0.84
HDAC6-214ENST00000465269 GNAT3A8MTJ3 354 aa20.26■□□□□ 0.83
HDAC6-214ENST00000465269 GTF2E1P29083 439 aaPredicted RBP20.26■□□□□ 0.83
HDAC6-214ENST00000465269 GPRC5DQ9NZD1 345 aa20.26■□□□□ 0.83
HDAC6-214ENST00000465269 ADARB2Q9NS39 739 aaKnown RBP20.25■□□□□ 0.83
HDAC6-214ENST00000465269 BTBD11A6QL63 1104 aa20.24■□□□□ 0.83
HDAC6-214ENST00000465269 DIAPH1O60610 1272 aaKnown RBP20.24■□□□□ 0.83
HDAC6-214ENST00000465269 AOC3Q16853 763 aa20.24■□□□□ 0.83
HDAC6-214ENST00000465269 PRPF38BQ5VTL8 546 aaKnown RBP20.24■□□□□ 0.83
HDAC6-214ENST00000465269 NIM1KQ8IY84 436 aa20.24■□□□□ 0.83
HDAC6-214ENST00000465269 KNSTRNQ9Y448 316 aa20.24■□□□□ 0.83
HDAC6-214ENST00000465269 SHTN1A0MZ66 631 aa20.23■□□□□ 0.83
HDAC6-214ENST00000465269 GMPSP49915 693 aaPredicted RBP20.23■□□□□ 0.83
HDAC6-214ENST00000465269 HIRAP54198 1017 aaPredicted RBP20.23■□□□□ 0.83
HDAC6-214ENST00000465269 CRY2Q49AN0 593 aa20.23■□□□□ 0.83
HDAC6-214ENST00000465269 AMER1Q5JTC6 1135 aaPredicted RBP20.23■□□□□ 0.83
HDAC6-214ENST00000465269 PPIP5K2O43314 1243 aa20.22■□□□□ 0.83
HDAC6-214ENST00000465269 HSPA5P11021 654 aaKnown RBP20.22■□□□□ 0.83
HDAC6-214ENST00000465269 TRPM4Q8TD43 1214 aa20.22■□□□□ 0.83
HDAC6-214ENST00000465269 NPC1L1Q9UHC9 1359 aa20.21■□□□□ 0.83
HDAC6-214ENST00000465269 U2SURPO15042 1029 aaKnown RBP20.21■□□□□ 0.83
HDAC6-214ENST00000465269 CXCL9Q07325 125 aa20.21■□□□□ 0.83
HDAC6-214ENST00000465269 C3orf67Q6ZVT6 689 aa20.21■□□□□ 0.83
HDAC6-214ENST00000465269 HHIPL1Q96JK4 782 aa20.21■□□□□ 0.83
HDAC6-214ENST00000465269 HUNKP57058 714 aa20.2■□□□□ 0.82
HDAC6-214ENST00000465269 NGEFQ8N5V2 710 aa20.2■□□□□ 0.82
HDAC6-214ENST00000465269 RPGRQ92834 1020 aaKnown RBP20.2■□□□□ 0.82
HDAC6-214ENST00000465269 CEMIPQ8WUJ3 1361 aa20.2■□□□□ 0.82
HDAC6-214ENST00000465269 PPEF1O14829 653 aaPredicted RBP20.19■□□□□ 0.82
HDAC6-214ENST00000465269 NOGQ13253 232 aa20.19■□□□□ 0.82
HDAC6-214ENST00000465269 CC2D2BQ6DHV5 1058 aa20.19■□□□□ 0.82
HDAC6-214ENST00000465269 USP48Q86UV5 1035 aa20.19■□□□□ 0.82
HDAC6-214ENST00000465269 GAS2L2Q8NHY3 880 aa20.19■□□□□ 0.82
HDAC6-214ENST00000465269 TRPA1O75762 1119 aa20.18■□□□□ 0.82
HDAC6-214ENST00000465269 GPTP24298 496 aa20.18■□□□□ 0.82
HDAC6-214ENST00000465269 CNGB1Q14028 1251 aaPredicted RBP20.18■□□□□ 0.82
HDAC6-214ENST00000465269 PHACTR3Q96KR7 559 aa20.18■□□□□ 0.82
HDAC6-214ENST00000465269 FAM155AB1AL88 458 aaPredicted RBP20.17■□□□□ 0.82
HDAC6-214ENST00000465269 RAD17O75943 681 aa20.17■□□□□ 0.82
HDAC6-214ENST00000465269 SNRPA1P09661 255 aaKnown RBP20.17■□□□□ 0.82
HDAC6-214ENST00000465269 PGAP2Q9UHJ9 254 aa20.17■□□□□ 0.82
HDAC6-214ENST00000465269 HOXA10P31260 410 aaPredicted RBP20.16■□□□□ 0.82
HDAC6-214ENST00000465269 KIF23Q02241 960 aaPredicted RBP20.16■□□□□ 0.82
HDAC6-214ENST00000465269 COL3A1P02461 1466 aaPredicted RBP20.16■□□□□ 0.82
HDAC6-214ENST00000465269 CC2D1BQ5T0F9 858 aaKnown RBP20.15■□□□□ 0.82
HDAC6-214ENST00000465269 MCM10Q7L590 875 aa20.15■□□□□ 0.82
HDAC6-214ENST00000465269 RNF186Q9NXI6 227 aa20.15■□□□□ 0.82
HDAC6-214ENST00000465269 MKI67P46013 3256 aaKnown RBP20.15■□□□□ 0.82
HDAC6-214ENST00000465269 UBN2Q6ZU65 1347 aa20.14■□□□□ 0.81
HDAC6-214ENST00000465269 CDC37L1Q7L3B6 337 aa20.14■□□□□ 0.81
HDAC6-214ENST00000465269 BCL2L13Q9BXK5 485 aa20.14■□□□□ 0.81
HDAC6-214ENST00000465269 ZNRF3Q9ULT6 936 aa20.14■□□□□ 0.81
HDAC6-214ENST00000465269 RIC1Q4ADV7 1423 aa20.13■□□□□ 0.81
HDAC6-214ENST00000465269 DCTN1Q14203 1278 aa20.13■□□□□ 0.81
HDAC6-214ENST00000465269 SUSD4Q5VX71 490 aa20.13■□□□□ 0.81
HDAC6-214ENST00000465269 TTLL7Q6ZT98 887 aa20.13■□□□□ 0.81
HDAC6-214ENST00000465269 RBM17Q96I25 401 aaKnown RBP20.13■□□□□ 0.81
HDAC6-214ENST00000465269 EIF4G2P78344 907 aaKnown RBP eCLIP20.12■□□□□ 0.81
HDAC6-214ENST00000465269 RGMBQ6NW40 437 aa20.12■□□□□ 0.81
HDAC6-214ENST00000465269 CRAMP1Q96RY5 1269 aa20.12■□□□□ 0.81
HDAC6-214ENST00000465269 NYXQ9GZU5 481 aa20.12■□□□□ 0.81
HDAC6-214ENST00000465269 EGFRP00533 1210 aa20.11■□□□□ 0.81
HDAC6-214ENST00000465269 MIS18AQ9NYP9 233 aa20.11■□□□□ 0.81
HDAC6-214ENST00000465269 CNOT7Q9UIV1 285 aaKnown RBP20.11■□□□□ 0.81
HDAC6-214ENST00000465269 HPS5Q9UPZ3 1129 aa20.11■□□□□ 0.81
HDAC6-214ENST00000465269 ZBTB12Q9Y330 459 aaPredicted RBP20.11■□□□□ 0.81
HDAC6-214ENST00000465269 NUP98P52948 1817 aa20.11■□□□□ 0.81
HDAC6-214ENST00000465269 KIF7Q2M1P5 1343 aa20.1■□□□□ 0.81
HDAC6-214ENST00000465269 ADM5C9JUS6 153 aa20.1■□□□□ 0.81
HDAC6-214ENST00000465269 PRKAR2BP31323 418 aa20.1■□□□□ 0.81
HDAC6-214ENST00000465269 SAMD7Q7Z3H4 446 aa20.1■□□□□ 0.81
HDAC6-214ENST00000465269 CTU1Q7Z7A3 348 aaKnown RBP20.1■□□□□ 0.81
HDAC6-214ENST00000465269 ZC3H15Q8WU90 426 aaKnown RBP20.1■□□□□ 0.81
HDAC6-214ENST00000465269 ZBTB3Q9H5J0 574 aa20.1■□□□□ 0.81
HDAC6-214ENST00000465269 SAGE1Q9NXZ1 904 aa20.1■□□□□ 0.81
HDAC6-214ENST00000465269 YDJCA8MPS7 323 aa20.09■□□□□ 0.81
HDAC6-214ENST00000465269 RGL2O15211 777 aa20.09■□□□□ 0.81
HDAC6-214ENST00000465269 ZNF157P51786 506 aaPredicted RBP20.09■□□□□ 0.81
HDAC6-214ENST00000465269 MICALL2Q8IY33 904 aa20.09■□□□□ 0.81
HDAC6-214ENST00000465269 ATP6V0A2Q9Y487 856 aa20.09■□□□□ 0.81
HDAC6-214ENST00000465269 TBC1D10BQ4KMP7 808 aaPredicted RBP20.08■□□□□ 0.81
HDAC6-214ENST00000465269 GRIPAP1Q4V328 841 aa20.08■□□□□ 0.81
HDAC6-214ENST00000465269 CSRNP1Q96S65 589 aa20.08■□□□□ 0.81
HDAC6-214ENST00000465269 GBA2Q9HCG7 927 aaPredicted RBP20.08■□□□□ 0.81
HDAC6-214ENST00000465269 RRP7AQ9Y3A4 280 aaKnown RBP20.08■□□□□ 0.81
HDAC6-214ENST00000465269 ABCC4O15439 1325 aa20.07■□□□□ 0.8
HDAC6-214ENST00000465269 MAP3K15Q6ZN16 1313 aa20.07■□□□□ 0.8
HDAC6-214ENST00000465269 POLR2AP24928 1970 aaKnown RBP20.07■□□□□ 0.8
HDAC6-214ENST00000465269 NTSR2O95665 410 aa20.07■□□□□ 0.8
HDAC6-214ENST00000465269 KRT26Q7Z3Y9 468 aa20.07■□□□□ 0.8
HDAC6-214ENST00000465269 RBM26Q5T8P6 1007 aaKnown RBP20.06■□□□□ 0.8
HDAC6-214ENST00000465269 DPP8Q6V1X1 898 aaPredicted RBP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms