RNA–Protein interactions for RNA: ENST00000465223.1

NCSTN-210, Transcript of nicastrin, humanhuman

TSL 2

Gene NCSTN, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-210ENST00000465223 NIM1KQ8IY84 436 aa20.53■□□□□ 0.88
NCSTN-210ENST00000465223 FMNL2Q96PY5 1086 aa20.53■□□□□ 0.88
NCSTN-210ENST00000465223 PANK3Q9H999 370 aa20.53■□□□□ 0.88
NCSTN-210ENST00000465223 HUNKP57058 714 aa20.52■□□□□ 0.88
NCSTN-210ENST00000465223 TEFQ10587 303 aa20.52■□□□□ 0.88
NCSTN-210ENST00000465223 DLK2Q6UY11 383 aa20.52■□□□□ 0.88
NCSTN-210ENST00000465223 IL17REQ8NFR9 667 aa20.52■□□□□ 0.88
NCSTN-210ENST00000465223 PGAP2Q9UHJ9 254 aa20.52■□□□□ 0.88
NCSTN-210ENST00000465223 ZNF652Q9Y2D9 606 aa20.52■□□□□ 0.88
NCSTN-210ENST00000465223 USP16Q9Y5T5 823 aa20.52■□□□□ 0.88
NCSTN-210ENST00000465223 AKAP11Q9UKA4 1901 aa20.51■□□□□ 0.87
NCSTN-210ENST00000465223 FAM155AB1AL88 458 aaPredicted RBP20.51■□□□□ 0.87
NCSTN-210ENST00000465223 TCERG1O14776 1098 aaKnown RBP20.51■□□□□ 0.87
NCSTN-210ENST00000465223 TRPA1O75762 1119 aa20.51■□□□□ 0.87
NCSTN-210ENST00000465223 HIRAP54198 1017 aaPredicted RBP20.51■□□□□ 0.87
NCSTN-210ENST00000465223 CC2D2BQ6DHV5 1058 aa20.51■□□□□ 0.87
NCSTN-210ENST00000465223 PRAMEF22A3QJZ6 481 aa20.5■□□□□ 0.87
NCSTN-210ENST00000465223 RNF186Q9NXI6 227 aa20.5■□□□□ 0.87
NCSTN-210ENST00000465223 SAGE1Q9NXZ1 904 aa20.5■□□□□ 0.87
NCSTN-210ENST00000465223 ABCC12Q96J65 1359 aa20.49■□□□□ 0.87
NCSTN-210ENST00000465223 NPC1L1Q9UHC9 1359 aa20.49■□□□□ 0.87
NCSTN-210ENST00000465223 GTF2E1P29083 439 aaPredicted RBP20.49■□□□□ 0.87
NCSTN-210ENST00000465223 GMPSP49915 693 aaPredicted RBP20.49■□□□□ 0.87
NCSTN-210ENST00000465223 KIF23Q02241 960 aaPredicted RBP20.49■□□□□ 0.87
NCSTN-210ENST00000465223 CTU1Q7Z7A3 348 aaKnown RBP20.49■□□□□ 0.87
NCSTN-210ENST00000465223 HPS5Q9UPZ3 1129 aa20.49■□□□□ 0.87
NCSTN-210ENST00000465223 PPIP5K2O43314 1243 aa20.48■□□□□ 0.87
NCSTN-210ENST00000465223 CXCL9Q07325 125 aa20.48■□□□□ 0.87
NCSTN-210ENST00000465223 AOC3Q16853 763 aa20.48■□□□□ 0.87
NCSTN-210ENST00000465223 CRY2Q49AN0 593 aa20.48■□□□□ 0.87
NCSTN-210ENST00000465223 CDC37L1Q7L3B6 337 aa20.48■□□□□ 0.87
NCSTN-210ENST00000465223 NBPF15Q8N660 670 aa20.48■□□□□ 0.87
NCSTN-210ENST00000465223 TRPM4Q8TD43 1214 aa20.48■□□□□ 0.87
NCSTN-210ENST00000465223 HLFQ16534 295 aa20.47■□□□□ 0.87
NCSTN-210ENST00000465223 HABP4Q5JVS0 413 aaKnown RBP20.47■□□□□ 0.87
NCSTN-210ENST00000465223 RGMBQ6NW40 437 aa20.47■□□□□ 0.87
NCSTN-210ENST00000465223 USP48Q86UV5 1035 aa20.47■□□□□ 0.87
NCSTN-210ENST00000465223 NUTM1Q86Y26 1132 aa20.47■□□□□ 0.87
NCSTN-210ENST00000465223 GCC1Q96CN9 775 aa20.47■□□□□ 0.87
NCSTN-210ENST00000465223 SHTN1A0MZ66 631 aa20.45■□□□□ 0.86
NCSTN-210ENST00000465223 ZC3H15Q8WU90 426 aaKnown RBP20.45■□□□□ 0.86
NCSTN-210ENST00000465223 RPGRQ92834 1020 aaKnown RBP20.45■□□□□ 0.86
NCSTN-210ENST00000465223 POLR2AP24928 1970 aaKnown RBP20.43■□□□□ 0.86
NCSTN-210ENST00000465223 GNAT3A8MTJ3 354 aa20.43■□□□□ 0.86
NCSTN-210ENST00000465223 NBPF26B4DH59 902 aa20.43■□□□□ 0.86
NCSTN-210ENST00000465223 PPEF1O14829 653 aaPredicted RBP20.43■□□□□ 0.86
NCSTN-210ENST00000465223 HOXA10P31260 410 aaPredicted RBP20.43■□□□□ 0.86
NCSTN-210ENST00000465223 NBPF10Q6P3W6 841 aaKnown RBP20.43■□□□□ 0.86
NCSTN-210ENST00000465223 BCL2L13Q9BXK5 485 aa20.43■□□□□ 0.86
NCSTN-210ENST00000465223 ZNRF3Q9ULT6 936 aa20.43■□□□□ 0.86
NCSTN-210ENST00000465223 BTBD11A6QL63 1104 aa20.42■□□□□ 0.86
NCSTN-210ENST00000465223 GRIPAP1Q4V328 841 aa20.42■□□□□ 0.86
NCSTN-210ENST00000465223 RAD17O75943 681 aa20.41■□□□□ 0.86
NCSTN-210ENST00000465223 ZNF157P51786 506 aaPredicted RBP20.41■□□□□ 0.86
NCSTN-210ENST00000465223 CCDC102AQ96A19 550 aa20.41■□□□□ 0.86
NCSTN-210ENST00000465223 CSRNP1Q96S65 589 aa20.41■□□□□ 0.86
NCSTN-210ENST00000465223 GBA2Q9HCG7 927 aaPredicted RBP20.41■□□□□ 0.86
NCSTN-210ENST00000465223 RIC1Q4ADV7 1423 aa20.4■□□□□ 0.86
NCSTN-210ENST00000465223 NUP98P52948 1817 aa20.39■□□□□ 0.86
NCSTN-210ENST00000465223 RGL2O15211 777 aa20.39■□□□□ 0.85
NCSTN-210ENST00000465223 NYXQ9GZU5 481 aa20.39■□□□□ 0.85
NCSTN-210ENST00000465223 CNOT7Q9UIV1 285 aaKnown RBP20.39■□□□□ 0.85
NCSTN-210ENST00000465223 KIF7Q2M1P5 1343 aa20.38■□□□□ 0.85
NCSTN-210ENST00000465223 CDHR2Q9BYE9 1310 aa20.38■□□□□ 0.85
NCSTN-210ENST00000465223 C3orf67Q6ZVT6 689 aa20.38■□□□□ 0.85
NCSTN-210ENST00000465223 C2orf69Q8N8R5 385 aa20.38■□□□□ 0.85
NCSTN-210ENST00000465223 RBM17Q96I25 401 aaKnown RBP20.38■□□□□ 0.85
NCSTN-210ENST00000465223 CRAMP1Q96RY5 1269 aa20.38■□□□□ 0.85
NCSTN-210ENST00000465223 CEMIPQ8WUJ3 1361 aa20.37■□□□□ 0.85
NCSTN-210ENST00000465223 DIAPH1O60610 1272 aaKnown RBP20.37■□□□□ 0.85
NCSTN-210ENST00000465223 SLC10A3P09131 477 aa20.37■□□□□ 0.85
NCSTN-210ENST00000465223 GAS2L2Q8NHY3 880 aa20.37■□□□□ 0.85
NCSTN-210ENST00000465223 ADM5C9JUS6 153 aa20.36■□□□□ 0.85
NCSTN-210ENST00000465223 SNRPA1P09661 255 aaKnown RBP20.36■□□□□ 0.85
NCSTN-210ENST00000465223 SAMD7Q7Z3H4 446 aa20.36■□□□□ 0.85
NCSTN-210ENST00000465223 MICALL2Q8IY33 904 aa20.36■□□□□ 0.85
NCSTN-210ENST00000465223 VPS33BQ9H267 617 aa20.36■□□□□ 0.85
NCSTN-210ENST00000465223 PKN2Q16513 984 aaKnown RBP20.35■□□□□ 0.85
NCSTN-210ENST00000465223 KRT26Q7Z3Y9 468 aa20.35■□□□□ 0.85
NCSTN-210ENST00000465223 HDAC9Q9UKV0 1011 aa20.35■□□□□ 0.85
NCSTN-210ENST00000465223 H7C1D1 291 aa20.34■□□□□ 0.85
NCSTN-210ENST00000465223 FXR1P51114 621 aaKnown RBP eCLIP20.34■□□□□ 0.85
NCSTN-210ENST00000465223 TNIP1Q15025 636 aa20.34■□□□□ 0.85
NCSTN-210ENST00000465223 NGEFQ8N5V2 710 aa20.34■□□□□ 0.85
NCSTN-210ENST00000465223 ZBTB12Q9Y330 459 aaPredicted RBP20.34■□□□□ 0.85
NCSTN-210ENST00000465223 KNSTRNQ9Y448 316 aa20.34■□□□□ 0.85
NCSTN-210ENST00000465223 ATP6V0A2Q9Y487 856 aa20.34■□□□□ 0.85
NCSTN-210ENST00000465223 UBN2Q6ZU65 1347 aa20.33■□□□□ 0.85
NCSTN-210ENST00000465223 YDJCA8MPS7 323 aa20.33■□□□□ 0.85
NCSTN-210ENST00000465223 EGFRP00533 1210 aa20.33■□□□□ 0.85
NCSTN-210ENST00000465223 GPTP24298 496 aa20.33■□□□□ 0.85
NCSTN-210ENST00000465223 SUSD4Q5VX71 490 aa20.33■□□□□ 0.85
NCSTN-210ENST00000465223 SUPT20HQ8NEM7 779 aa20.33■□□□□ 0.85
NCSTN-210ENST00000465223 ZNF296Q8WUU4 475 aaPredicted RBP20.33■□□□□ 0.85
NCSTN-210ENST00000465223 RTFDC1Q9BY42 306 aaPredicted RBP20.33■□□□□ 0.85
NCSTN-210ENST00000465223 TBC1D10BQ4KMP7 808 aaPredicted RBP20.32■□□□□ 0.84
NCSTN-210ENST00000465223 TMX4Q9H1E5 349 aaPredicted RBP20.32■□□□□ 0.84
NCSTN-210ENST00000465223 TBC1D8O95759 1140 aa20.31■□□□□ 0.84
NCSTN-210ENST00000465223 KIAA2012Q0VF49 1180 aa20.31■□□□□ 0.84
NCSTN-210ENST00000465223 AMER1Q5JTC6 1135 aaPredicted RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms