RNA–Protein interactions for RNA: ENST00000465155.5

ATF3-208, Transcript of activating transcription factor 3, humanhuman

TSL 2

Gene ATF3, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-208ENST00000465155 CCDC191Q8NCU4 936 aa16.85■□□□□ 0.29
ATF3-208ENST00000465155 CWC25Q9NXE8 425 aaPredicted RBP16.85■□□□□ 0.29
ATF3-208ENST00000465155 RGL2O15211 777 aa16.85■□□□□ 0.29
ATF3-208ENST00000465155 GNAI3P08754 354 aa16.85■□□□□ 0.29
ATF3-208ENST00000465155 NBPF7P0C2Y1 421 aaPredicted RBP16.85■□□□□ 0.29
ATF3-208ENST00000465155 TRIM28Q13263 835 aaKnown RBP16.85■□□□□ 0.29
ATF3-208ENST00000465155 ZNF34Q8IZ26 560 aa16.85■□□□□ 0.29
ATF3-208ENST00000465155 FLAD1Q8NFF5 587 aa16.85■□□□□ 0.29
ATF3-208ENST00000465155 PNPLA7Q6ZV29 1317 aa16.84■□□□□ 0.29
ATF3-208ENST00000465155 IBTKQ9P2D0 1353 aaPredicted RBP16.84■□□□□ 0.29
ATF3-208ENST00000465155 GRM8O00222 908 aa16.84■□□□□ 0.29
ATF3-208ENST00000465155 UBTFL1P0CB47 393 aaPredicted RBP16.84■□□□□ 0.29
ATF3-208ENST00000465155 NLRP10Q86W26 655 aa16.84■□□□□ 0.29
ATF3-208ENST00000465155 COL23A1Q86Y22 540 aaPredicted RBP16.84■□□□□ 0.29
ATF3-208ENST00000465155 C1orf115Q9H7X2 142 aa16.84■□□□□ 0.29
ATF3-208ENST00000465155 NIP7Q9Y221 180 aaKnown RBP eCLIP16.84■□□□□ 0.29
ATF3-208ENST00000465155 UBN2Q6ZU65 1347 aa16.84■□□□□ 0.29
ATF3-208ENST00000465155 TBC1D9BQ66K14 1250 aa16.82■□□□□ 0.28
ATF3-208ENST00000465155 BICDL1Q6ZP65 573 aa16.82■□□□□ 0.28
ATF3-208ENST00000465155 PPP4R2Q9NY27 417 aa16.82■□□□□ 0.28
ATF3-208ENST00000465155 UTYO14607 1347 aa16.82■□□□□ 0.28
ATF3-208ENST00000465155 GNAI2P04899 355 aa16.81■□□□□ 0.28
ATF3-208ENST00000465155 GYS1P13807 737 aa16.81■□□□□ 0.28
ATF3-208ENST00000465155 PARP10Q53GL7 1025 aa16.81■□□□□ 0.28
ATF3-208ENST00000465155 UBE3BQ7Z3V4 1068 aa16.81■□□□□ 0.28
ATF3-208ENST00000465155 JARID2Q92833 1246 aaPredicted RBP16.81■□□□□ 0.28
ATF3-208ENST00000465155 COL24A1Q17RW2 1714 aa16.81■□□□□ 0.28
ATF3-208ENST00000465155 RTL5Q5HYW3 569 aaPredicted RBP16.81■□□□□ 0.28
ATF3-208ENST00000465155 PCDHB15Q9Y5E8 787 aa16.81■□□□□ 0.28
ATF3-208ENST00000465155 LRRFIP2Q9Y608 721 aaKnown RBP16.81■□□□□ 0.28
ATF3-208ENST00000465155 FAM177BA6PVY3 158 aa16.8■□□□□ 0.28
ATF3-208ENST00000465155 H7C1W4 665 aa16.8■□□□□ 0.28
ATF3-208ENST00000465155 SUSD4Q5VX71 490 aa16.8■□□□□ 0.28
ATF3-208ENST00000465155 SETDB2Q96T68 719 aa16.8■□□□□ 0.28
ATF3-208ENST00000465155 PCCAP05165 728 aaPredicted RBP16.79■□□□□ 0.28
ATF3-208ENST00000465155 PPP1R42Q7Z4L9 355 aa16.79■□□□□ 0.28
ATF3-208ENST00000465155 ZBTB38Q8NAP3 1195 aaPredicted RBP16.79■□□□□ 0.28
ATF3-208ENST00000465155 FAM89AQ96GI7 184 aa16.79■□□□□ 0.28
ATF3-208ENST00000465155 TRMT112Q9UI30 125 aaKnown RBP16.79■□□□□ 0.28
ATF3-208ENST00000465155 CASP7P55210 303 aa16.78■□□□□ 0.28
ATF3-208ENST00000465155 SUCLG2Q96I99 432 aa16.78■□□□□ 0.28
ATF3-208ENST00000465155 CCDC136Q96JN2 1154 aa16.78■□□□□ 0.28
ATF3-208ENST00000465155 UTP14AQ9BVJ6 771 aaKnown RBP16.78■□□□□ 0.28
ATF3-208ENST00000465155 HDAC5Q9UQL6 1122 aa16.78■□□□□ 0.28
ATF3-208ENST00000465155 NFIXQ14938 502 aa16.78■□□□□ 0.28
ATF3-208ENST00000465155 B4GALNT3Q6L9W6 998 aa16.78■□□□□ 0.28
ATF3-208ENST00000465155 NTSR2O95665 410 aa16.77■□□□□ 0.27
ATF3-208ENST00000465155 SYNE4Q8N205 404 aa16.77■□□□□ 0.27
ATF3-208ENST00000465155 CARMIL3Q8ND23 1372 aa16.76■□□□□ 0.27
ATF3-208ENST00000465155 CEP85Q6P2H3 762 aa16.76■□□□□ 0.27
ATF3-208ENST00000465155 NLGN1Q8N2Q7 840 aa16.76■□□□□ 0.27
ATF3-208ENST00000465155 KAZALD1Q96I82 304 aa16.76■□□□□ 0.27
ATF3-208ENST00000465155 MYH3P11055 1940 aa16.75■□□□□ 0.27
ATF3-208ENST00000465155 SH3TC1Q8TE82 1336 aa16.75■□□□□ 0.27
ATF3-208ENST00000465155 CDHR2Q9BYE9 1310 aa16.75■□□□□ 0.27
ATF3-208ENST00000465155 TM4SF1P30408 202 aa16.75■□□□□ 0.27
ATF3-208ENST00000465155 NBPF5PQ86XG9 351 aaPredicted RBP16.75■□□□□ 0.27
ATF3-208ENST00000465155 NUTM1Q86Y26 1132 aa16.75■□□□□ 0.27
ATF3-208ENST00000465155 RPAP2Q8IXW5 612 aaPredicted RBP16.75■□□□□ 0.27
ATF3-208ENST00000465155 BICC1Q9H694 974 aaKnown RBP16.75■□□□□ 0.27
ATF3-208ENST00000465155 LAMB2P55268 1798 aa16.75■□□□□ 0.27
ATF3-208ENST00000465155 DDX60Q8IY21 1712 aaKnown RBP16.75■□□□□ 0.27
ATF3-208ENST00000465155 EPHA10Q5JZY3 1008 aa16.74■□□□□ 0.27
ATF3-208ENST00000465155 MSL1Q68DK7 614 aa16.74■□□□□ 0.27
ATF3-208ENST00000465155 ANKRD44Q8N8A2 993 aa16.74■□□□□ 0.27
ATF3-208ENST00000465155 PDGFDQ9GZP0 370 aaPredicted RBP16.74■□□□□ 0.27
ATF3-208ENST00000465155 NYXQ9GZU5 481 aa16.74■□□□□ 0.27
ATF3-208ENST00000465155 IRS4O14654 1257 aaPredicted RBP16.74■□□□□ 0.27
ATF3-208ENST00000465155 GTF2E1P29083 439 aaPredicted RBP16.74■□□□□ 0.27
ATF3-208ENST00000465155 SIRT2Q8IXJ6 389 aa16.74■□□□□ 0.27
ATF3-208ENST00000465155 PNMA6EA0A0J9YXQ4 647 aa16.73■□□□□ 0.27
ATF3-208ENST00000465155 NPHP1O15259 732 aa16.73■□□□□ 0.27
ATF3-208ENST00000465155 IGHDP01880 384 aa16.73■□□□□ 0.27
ATF3-208ENST00000465155 FOXO4P98177 505 aa16.73■□□□□ 0.27
ATF3-208ENST00000465155 ATP8B2P98198 1209 aa16.73■□□□□ 0.27
ATF3-208ENST00000465155 ERFEQ4G0M1 354 aa16.73■□□□□ 0.27
ATF3-208ENST00000465155 TPTE2Q6XPS3 522 aa16.73■□□□□ 0.27
ATF3-208ENST00000465155 RWDD1Q9H446 243 aaPredicted RBP16.73■□□□□ 0.27
ATF3-208ENST00000465155 CASZ1Q86V15 1759 aa16.73■□□□□ 0.27
ATF3-208ENST00000465155 DDR1Q08345 913 aa16.72■□□□□ 0.27
ATF3-208ENST00000465155 HDAC1Q13547 482 aaPredicted RBP16.72■□□□□ 0.27
ATF3-208ENST00000465155 R3HDM1Q15032 1099 aaKnown RBP16.72■□□□□ 0.27
ATF3-208ENST00000465155 PLA2G12BQ9BX93 195 aa16.72■□□□□ 0.27
ATF3-208ENST00000465155 POLRMTO00411 1230 aaKnown RBP16.71■□□□□ 0.27
ATF3-208ENST00000465155 SRGAP3O43295 1099 aa16.71■□□□□ 0.27
ATF3-208ENST00000465155 PDE8AO60658 829 aa16.71■□□□□ 0.27
ATF3-208ENST00000465155 SERPINB2P05120 415 aa16.71■□□□□ 0.27
ATF3-208ENST00000465155 HCLS1P14317 486 aaPredicted RBP16.71■□□□□ 0.27
ATF3-208ENST00000465155 RABL6Q3YEC7 729 aaPredicted RBP16.71■□□□□ 0.27
ATF3-208ENST00000465155 HMMRO75330 724 aa16.7■□□□□ 0.26
ATF3-208ENST00000465155 MMP10P09238 476 aa16.7■□□□□ 0.26
ATF3-208ENST00000465155 C1QBPQ07021 282 aaKnown RBP16.7■□□□□ 0.26
ATF3-208ENST00000465155 MTX1Q13505 466 aa16.7■□□□□ 0.26
ATF3-208ENST00000465155 LMBR1LQ6UX01 489 aa16.7■□□□□ 0.26
ATF3-208ENST00000465155 CNBD1Q8NA66 436 aa16.7■□□□□ 0.26
ATF3-208ENST00000465155 ABCC12Q96J65 1359 aa16.7■□□□□ 0.26
ATF3-208ENST00000465155 HSP90B1P14625 803 aaKnown RBP16.7■□□□□ 0.26
ATF3-208ENST00000465155 CTSWP56202 376 aa16.7■□□□□ 0.26
ATF3-208ENST00000465155 CCDC24Q8N4L8 307 aa16.7■□□□□ 0.26
ATF3-208ENST00000465155 SLC16A10Q8TF71 515 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms