RNA–Protein interactions for RNA: ENST00000464783.1

RPUSD3-211, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,149 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-211ENST00000464783 MYD88Q99836 296 aa15.38■□□□□ 0.05
RPUSD3-211ENST00000464783 PDZRN3Q9UPQ7 1066 aa15.38■□□□□ 0.05
RPUSD3-211ENST00000464783 MAP3K2Q9Y2U5 619 aa15.38■□□□□ 0.05
RPUSD3-211ENST00000464783 GOLGB1Q14789 3259 aaKnown RBP15.37■□□□□ 0.05
RPUSD3-211ENST00000464783 LAMB2P55268 1798 aa15.37■□□□□ 0.05
RPUSD3-211ENST00000464783 PI4KAP2A4QPH2 592 aa15.37■□□□□ 0.05
RPUSD3-211ENST00000464783 GRIN3BO60391 1043 aa15.37■□□□□ 0.05
RPUSD3-211ENST00000464783 NTSR2O95665 410 aa15.37■□□□□ 0.05
RPUSD3-211ENST00000464783 NEXNQ0ZGT2 675 aa15.37■□□□□ 0.05
RPUSD3-211ENST00000464783 DALRD3Q5D0E6 543 aaKnown RBP15.37■□□□□ 0.05
RPUSD3-211ENST00000464783 PI4KAP1Q8N8J0 262 aa15.37■□□□□ 0.05
RPUSD3-211ENST00000464783 ZNF622Q969S3 477 aaKnown RBP eCLIP15.37■□□□□ 0.05
RPUSD3-211ENST00000464783 TRMT112Q9UI30 125 aaKnown RBP15.37■□□□□ 0.05
RPUSD3-211ENST00000464783 ZBED9Q6R2W3 1325 aa15.37■□□□□ 0.05
RPUSD3-211ENST00000464783 ABCC12Q96J65 1359 aa15.36■□□□□ 0.05
RPUSD3-211ENST00000464783 KCNA3P22001 575 aa15.36■□□□□ 0.05
RPUSD3-211ENST00000464783 ISCA1Q9BUE6 129 aa15.36■□□□□ 0.05
RPUSD3-211ENST00000464783 METTL22Q9BUU2 404 aaPredicted RBP15.36■□□□□ 0.05
RPUSD3-211ENST00000464783 RNF123Q5XPI4 1314 aa15.36■□□□□ 0.05
RPUSD3-211ENST00000464783 ADCY9O60503 1353 aa15.36■□□□□ 0.05
RPUSD3-211ENST00000464783 DDX60Q8IY21 1712 aaKnown RBP15.35■□□□□ 0.05
RPUSD3-211ENST00000464783 SH3TC1Q8TE82 1336 aa15.35■□□□□ 0.05
RPUSD3-211ENST00000464783 RIC1Q4ADV7 1423 aa15.34■□□□□ 0.05
RPUSD3-211ENST00000464783 CT47B1P0C2W7 299 aaPredicted RBP15.34■□□□□ 0.05
RPUSD3-211ENST00000464783 TTLL6Q8N841 843 aa15.34■□□□□ 0.05
RPUSD3-211ENST00000464783 MASTLQ96GX5 879 aa15.34■□□□□ 0.05
RPUSD3-211ENST00000464783 BCL2L13Q9BXK5 485 aa15.34■□□□□ 0.05
RPUSD3-211ENST00000464783 SRGNP10124 158 aa15.33■□□□□ 0.04
RPUSD3-211ENST00000464783 NPR1P16066 1061 aa15.33■□□□□ 0.04
RPUSD3-211ENST00000464783 TRIM28Q13263 835 aaKnown RBP15.33■□□□□ 0.04
RPUSD3-211ENST00000464783 ALDH1L2Q3SY69 923 aa15.33■□□□□ 0.04
RPUSD3-211ENST00000464783 RTL5Q5HYW3 569 aaPredicted RBP15.33■□□□□ 0.04
RPUSD3-211ENST00000464783 STYK1Q6J9G0 422 aa15.33■□□□□ 0.04
RPUSD3-211ENST00000464783 CCDC191Q8NCU4 936 aa15.33■□□□□ 0.04
RPUSD3-211ENST00000464783 DNAAF4Q8WXU2 420 aa15.33■□□□□ 0.04
RPUSD3-211ENST00000464783 SSH1Q8WYL5 1049 aa15.33■□□□□ 0.04
RPUSD3-211ENST00000464783 RPGRQ92834 1020 aaKnown RBP15.33■□□□□ 0.04
RPUSD3-211ENST00000464783 NLRP3Q96P20 1036 aa15.33■□□□□ 0.04
RPUSD3-211ENST00000464783 SMC4Q9NTJ3 1288 aa15.33■□□□□ 0.04
RPUSD3-211ENST00000464783 CWC25Q9NXE8 425 aaPredicted RBP15.33■□□□□ 0.04
RPUSD3-211ENST00000464783 UTRNP46939 3433 aa15.32■□□□□ 0.04
RPUSD3-211ENST00000464783 SLX4Q8IY92 1834 aa15.32■□□□□ 0.04
RPUSD3-211ENST00000464783 MRPL50Q8N5N7 158 aaKnown RBP15.32■□□□□ 0.04
RPUSD3-211ENST00000464783 CNKSR1Q969H4 720 aa15.32■□□□□ 0.04
RPUSD3-211ENST00000464783 FAM89AQ96GI7 184 aa15.32■□□□□ 0.04
RPUSD3-211ENST00000464783 MYH3P11055 1940 aa15.31■□□□□ 0.04
RPUSD3-211ENST00000464783 HCLS1P14317 486 aaPredicted RBP15.31■□□□□ 0.04
RPUSD3-211ENST00000464783 ZNF219Q9P2Y4 722 aaPredicted RBP15.31■□□□□ 0.04
RPUSD3-211ENST00000464783 KLRG2A4D1S0 409 aaPredicted RBP15.3■□□□□ 0.04
RPUSD3-211ENST00000464783 F6X3S4 739 aa15.3■□□□□ 0.04
RPUSD3-211ENST00000464783 IGKV5-2P06315 115 aa15.3■□□□□ 0.04
RPUSD3-211ENST00000464783 PTPRCP08575 1304 aa15.3■□□□□ 0.04
RPUSD3-211ENST00000464783 CWF19L2Q2TBE0 894 aaKnown RBP15.3■□□□□ 0.04
RPUSD3-211ENST00000464783 SLC10A5Q5PT55 438 aa15.3■□□□□ 0.04
RPUSD3-211ENST00000464783 SLC4A10Q6U841 1118 aa15.3■□□□□ 0.04
RPUSD3-211ENST00000464783 ARHGAP27Q6ZUM4 889 aa15.3■□□□□ 0.04
RPUSD3-211ENST00000464783 SYNE4Q8N205 404 aa15.3■□□□□ 0.04
RPUSD3-211ENST00000464783 ZBTB38Q8NAP3 1195 aaPredicted RBP15.3■□□□□ 0.04
RPUSD3-211ENST00000464783 NEURL1BA8MQ27 555 aa15.29■□□□□ 0.04
RPUSD3-211ENST00000464783 IRS4O14654 1257 aaPredicted RBP15.29■□□□□ 0.04
RPUSD3-211ENST00000464783 HSP90B1P14625 803 aaKnown RBP15.29■□□□□ 0.04
RPUSD3-211ENST00000464783 ALDH1B1P30837 517 aa15.29■□□□□ 0.04
RPUSD3-211ENST00000464783 CRY2Q49AN0 593 aa15.29■□□□□ 0.04
RPUSD3-211ENST00000464783 PRPF40BQ6NWY9 871 aaKnown RBP15.29■□□□□ 0.04
RPUSD3-211ENST00000464783 LINS1Q8NG48 757 aa15.29■□□□□ 0.04
RPUSD3-211ENST00000464783 RBM17Q96I25 401 aaKnown RBP15.29■□□□□ 0.04
RPUSD3-211ENST00000464783 PCCAP05165 728 aaPredicted RBP15.28■□□□□ 0.04
RPUSD3-211ENST00000464783 C3orf67Q6ZVT6 689 aa15.28■□□□□ 0.04
RPUSD3-211ENST00000464783 JARID2Q92833 1246 aaPredicted RBP15.28■□□□□ 0.04
RPUSD3-211ENST00000464783 TAF1P21675 1872 aa15.28■□□□□ 0.04
RPUSD3-211ENST00000464783 CCDC88AQ3V6T2 1871 aa15.28■□□□□ 0.04
RPUSD3-211ENST00000464783 C21orf2O43822 256 aa15.27■□□□□ 0.04
RPUSD3-211ENST00000464783 RARSP54136 660 aaKnown RBP15.27■□□□□ 0.04
RPUSD3-211ENST00000464783 FER1L6Q2WGJ9 1857 aa15.27■□□□□ 0.03
RPUSD3-211ENST00000464783 KIF16BQ96L93 1317 aa15.26■□□□□ 0.03
RPUSD3-211ENST00000464783 YY1P25490 414 aa15.26■□□□□ 0.03
RPUSD3-211ENST00000464783 GCKRQ14397 625 aa15.26■□□□□ 0.03
RPUSD3-211ENST00000464783 DDX46Q7L014 1031 aaKnown RBP15.26■□□□□ 0.03
RPUSD3-211ENST00000464783 YTHDC1Q96MU7 727 aaKnown RBP15.26■□□□□ 0.03
RPUSD3-211ENST00000464783 SBF1O95248 1867 aa15.26■□□□□ 0.03
RPUSD3-211ENST00000464783 HOXA10P31260 410 aaPredicted RBP15.25■□□□□ 0.03
RPUSD3-211ENST00000464783 BEND3Q5T5X7 828 aa15.25■□□□□ 0.03
RPUSD3-211ENST00000464783 SOGA3Q5TF21 947 aa15.25■□□□□ 0.03
RPUSD3-211ENST00000464783 UBE3BQ7Z3V4 1068 aa15.25■□□□□ 0.03
RPUSD3-211ENST00000464783 CRAMP1Q96RY5 1269 aa15.25■□□□□ 0.03
RPUSD3-211ENST00000464783 SRCIN1Q9C0H9 1055 aa15.25■□□□□ 0.03
RPUSD3-211ENST00000464783 NOB1Q9ULX3 412 aaKnown RBP15.25■□□□□ 0.03
RPUSD3-211ENST00000464783 SPEF2Q9C093 1822 aa15.24■□□□□ 0.03
RPUSD3-211ENST00000464783 CDHR2Q9BYE9 1310 aa15.24■□□□□ 0.03
RPUSD3-211ENST00000464783 PPEF1O14829 653 aaPredicted RBP15.24■□□□□ 0.03
RPUSD3-211ENST00000464783 PDE8AO60658 829 aa15.24■□□□□ 0.03
RPUSD3-211ENST00000464783 TMX4Q9H1E5 349 aaPredicted RBP15.24■□□□□ 0.03
RPUSD3-211ENST00000464783 ABCC4O15439 1325 aa15.23■□□□□ 0.03
RPUSD3-211ENST00000464783 ALDH1L1O75891 902 aa15.23■□□□□ 0.03
RPUSD3-211ENST00000464783 SF3B3Q15393 1217 aaKnown RBP15.23■□□□□ 0.03
RPUSD3-211ENST00000464783 CCDC152Q4G0S7 254 aa15.23■□□□□ 0.03
RPUSD3-211ENST00000464783 CCDC93Q567U6 631 aa15.23■□□□□ 0.03
RPUSD3-211ENST00000464783 API5Q9BZZ5 524 aaKnown RBP15.23■□□□□ 0.03
RPUSD3-211ENST00000464783 C9orf78Q9NZ63 289 aaPredicted RBP15.23■□□□□ 0.03
RPUSD3-211ENST00000464783 H7C1W4 665 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms