RNA–Protein interactions for RNA: ENST00000464547.5

ATF3-207, Transcript of activating transcription factor 3, humanhuman

TSL 1 (best)

Gene ATF3, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-207ENST00000464547 TCIRG1Q13488 830 aa11.98□□□□□ -0.49
ATF3-207ENST00000464547 LMBR1LQ6UX01 489 aa11.98□□□□□ -0.49
ATF3-207ENST00000464547 IL25Q9H293 177 aa11.98□□□□□ -0.49
ATF3-207ENST00000464547 SPATA31A5Q5VU36 1347 aa11.97□□□□□ -0.49
ATF3-207ENST00000464547 SPATA31A7Q8IWB4 1347 aa11.97□□□□□ -0.49
ATF3-207ENST00000464547 SGSM2O43147 1006 aa11.97□□□□□ -0.49
ATF3-207ENST00000464547 EPB41L2O43491 1005 aaKnown RBP11.97□□□□□ -0.49
ATF3-207ENST00000464547 CYP19A1P11511 503 aaPredicted RBP11.97□□□□□ -0.49
ATF3-207ENST00000464547 MCCP23508 829 aa11.97□□□□□ -0.49
ATF3-207ENST00000464547 KIF6Q6ZMV9 814 aa11.97□□□□□ -0.49
ATF3-207ENST00000464547 IL17RAQ96F46 866 aa11.97□□□□□ -0.49
ATF3-207ENST00000464547 ANO2Q9NQ90 1003 aa11.97□□□□□ -0.49
ATF3-207ENST00000464547 TLR7Q9NYK1 1049 aaKnown RBP11.97□□□□□ -0.49
ATF3-207ENST00000464547 SLIT2O94813 1529 aa11.96□□□□□ -0.49
ATF3-207ENST00000464547 DEKP35659 375 aaKnown RBP11.96□□□□□ -0.49
ATF3-207ENST00000464547 ANAPC15P60006 121 aa11.96□□□□□ -0.49
ATF3-207ENST00000464547 TFCP2Q12800 502 aa11.96□□□□□ -0.49
ATF3-207ENST00000464547 TRIM28Q13263 835 aaKnown RBP11.96□□□□□ -0.49
ATF3-207ENST00000464547 DDB1Q16531 1140 aa11.96□□□□□ -0.49
ATF3-207ENST00000464547 SYTL4Q96C24 671 aaPredicted RBP11.96□□□□□ -0.49
ATF3-207ENST00000464547 EVI5LQ96CN4 794 aa11.96□□□□□ -0.49
ATF3-207ENST00000464547 PALD1Q9ULE6 856 aa11.96□□□□□ -0.49
ATF3-207ENST00000464547 CIZ1Q9ULV3 898 aaPredicted RBP11.96□□□□□ -0.49
ATF3-207ENST00000464547 ZNF330Q9Y3S2 320 aaPredicted RBP11.96□□□□□ -0.49
ATF3-207ENST00000464547 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.95□□□□□ -0.5
ATF3-207ENST00000464547 MAP3K15Q6ZN16 1313 aa11.95□□□□□ -0.5
ATF3-207ENST00000464547 TNNI3KQ59H18 835 aa11.95□□□□□ -0.5
ATF3-207ENST00000464547 BARGINQ6ZT62 677 aa11.95□□□□□ -0.5
ATF3-207ENST00000464547 LSG1Q9H089 658 aaKnown RBP11.95□□□□□ -0.5
ATF3-207ENST00000464547 FOXD4L1Q9NU39 408 aa11.95□□□□□ -0.5
ATF3-207ENST00000464547 FPGT-TNNI3KV9GXZ4 949 aa11.95□□□□□ -0.5
ATF3-207ENST00000464547 DOT1LQ8TEK3 1739 aa11.94□□□□□ -0.5
ATF3-207ENST00000464547 AK9Q5TCS8 1911 aa11.94□□□□□ -0.5
ATF3-207ENST00000464547 ST18O60284 1047 aa11.94□□□□□ -0.5
ATF3-207ENST00000464547 HSPA4P34932 840 aa11.94□□□□□ -0.5
ATF3-207ENST00000464547 MARCH10Q8NA82 808 aaPredicted RBP11.94□□□□□ -0.5
ATF3-207ENST00000464547 DIAPH3Q9NSV4 1193 aa11.94□□□□□ -0.5
ATF3-207ENST00000464547 CHMP3Q9Y3E7 222 aa11.94□□□□□ -0.5
ATF3-207ENST00000464547 NWD2Q9ULI1 1742 aa11.94□□□□□ -0.5
ATF3-207ENST00000464547 RAD50Q92878 1312 aa11.93□□□□□ -0.5
ATF3-207ENST00000464547 UBAP1LF5GYI3 381 aa11.93□□□□□ -0.5
ATF3-207ENST00000464547 PCCAP05165 728 aaPredicted RBP11.93□□□□□ -0.5
ATF3-207ENST00000464547 HSP90AA1P07900 732 aaKnown RBP11.93□□□□□ -0.5
ATF3-207ENST00000464547 ATP5JP18859 108 aa11.93□□□□□ -0.5
ATF3-207ENST00000464547 HLFQ16534 295 aa11.93□□□□□ -0.5
ATF3-207ENST00000464547 CWC27Q6UX04 472 aaKnown RBP11.93□□□□□ -0.5
ATF3-207ENST00000464547 ATG9AQ7Z3C6 839 aa11.93□□□□□ -0.5
ATF3-207ENST00000464547 RUFY2Q8WXA3 655 aa11.93□□□□□ -0.5
ATF3-207ENST00000464547 PLA2G12BQ9BX93 195 aa11.93□□□□□ -0.5
ATF3-207ENST00000464547 BOLA2Q9H3K6 86 aa11.93□□□□□ -0.5
ATF3-207ENST00000464547 DBNLQ9UJU6 430 aaKnown RBP11.93□□□□□ -0.5
ATF3-207ENST00000464547 ZBTB1Q9Y2K1 713 aa11.93□□□□□ -0.5
ATF3-207ENST00000464547 CCDC9Q9Y3X0 531 aaKnown RBP11.93□□□□□ -0.5
ATF3-207ENST00000464547 EYA2O00167 538 aa11.92□□□□□ -0.5
ATF3-207ENST00000464547 IL15P40933 162 aaPredicted RBP11.92□□□□□ -0.5
ATF3-207ENST00000464547 HSP90AB3PQ58FF7 597 aa11.92□□□□□ -0.5
ATF3-207ENST00000464547 GIGYF2Q6Y7W6 1299 aaKnown RBP11.92□□□□□ -0.5
ATF3-207ENST00000464547 KIAA1211Q6ZU35 1233 aa11.92□□□□□ -0.5
ATF3-207ENST00000464547 ACSBG1Q96GR2 724 aa11.92□□□□□ -0.5
ATF3-207ENST00000464547 ARXQ96QS3 562 aa11.92□□□□□ -0.5
ATF3-207ENST00000464547 GPR108Q9NPR9 543 aa11.92□□□□□ -0.5
ATF3-207ENST00000464547 HIP1O00291 1037 aa11.91□□□□□ -0.5
ATF3-207ENST00000464547 CIAO1O76071 339 aa11.91□□□□□ -0.5
ATF3-207ENST00000464547 MCM4P33991 863 aa11.91□□□□□ -0.5
ATF3-207ENST00000464547 IL6STP40189 918 aaPredicted RBP11.91□□□□□ -0.5
ATF3-207ENST00000464547 NEK4P51957 841 aa11.91□□□□□ -0.5
ATF3-207ENST00000464547 NMIQ13287 307 aaPredicted RBP11.91□□□□□ -0.5
ATF3-207ENST00000464547 NLRP10Q86W26 655 aa11.91□□□□□ -0.5
ATF3-207ENST00000464547 ZBTB38Q8NAP3 1195 aaPredicted RBP11.91□□□□□ -0.5
ATF3-207ENST00000464547 ZNF594Q96JF6 807 aaPredicted RBP11.91□□□□□ -0.5
ATF3-207ENST00000464547 DBNDD2Q9BQY9 259 aa11.91□□□□□ -0.5
ATF3-207ENST00000464547 CDHR2Q9BYE9 1310 aa11.9□□□□□ -0.5
ATF3-207ENST00000464547 ERVV-1B6SEH8 477 aa11.9□□□□□ -0.5
ATF3-207ENST00000464547 CSF1RP07333 972 aa11.9□□□□□ -0.5
ATF3-207ENST00000464547 GPTP24298 496 aa11.9□□□□□ -0.5
ATF3-207ENST00000464547 MCM2P49736 904 aa11.9□□□□□ -0.5
ATF3-207ENST00000464547 RAB3GAP1Q15042 981 aa11.9□□□□□ -0.5
ATF3-207ENST00000464547 LRRC24Q50LG9 513 aa11.9□□□□□ -0.5
ATF3-207ENST00000464547 INTS5Q6P9B9 1019 aaKnown RBP11.9□□□□□ -0.5
ATF3-207ENST00000464547 FAM89AQ96GI7 184 aa11.9□□□□□ -0.5
ATF3-207ENST00000464547 SNRKQ9NRH2 765 aa11.9□□□□□ -0.5
ATF3-207ENST00000464547 SNX14Q9Y5W7 946 aa11.9□□□□□ -0.5
ATF3-207ENST00000464547 A0A0G2JS52 829 aa11.89□□□□□ -0.51
ATF3-207ENST00000464547 PTH1RQ03431 593 aa11.89□□□□□ -0.51
ATF3-207ENST00000464547 VPS72Q15906 364 aa11.89□□□□□ -0.51
ATF3-207ENST00000464547 DZIP3Q86Y13 1208 aaKnown RBP11.89□□□□□ -0.51
ATF3-207ENST00000464547 KCNB2Q92953 911 aa11.89□□□□□ -0.51
ATF3-207ENST00000464547 TNPO1Q92973 898 aaKnown RBP11.89□□□□□ -0.51
ATF3-207ENST00000464547 FAM227BQ96M60 508 aa11.89□□□□□ -0.51
ATF3-207ENST00000464547 HAUS7Q99871 368 aa11.89□□□□□ -0.51
ATF3-207ENST00000464547 FSD1Q9BTV5 496 aa11.89□□□□□ -0.51
ATF3-207ENST00000464547 PUS3Q9BZE2 481 aaKnown RBP11.89□□□□□ -0.51
ATF3-207ENST00000464547 CCDC87Q9NVE4 849 aa11.89□□□□□ -0.51
ATF3-207ENST00000464547 TBC1D2BQ9UPU7 963 aa11.89□□□□□ -0.51
ATF3-207ENST00000464547 JCADQ9P266 1359 aa11.89□□□□□ -0.51
ATF3-207ENST00000464547 LOC102724428A0A0B4J2F2 783 aa11.88□□□□□ -0.51
ATF3-207ENST00000464547 ATP6V1AP38606 617 aa11.88□□□□□ -0.51
ATF3-207ENST00000464547 EIF5P55010 431 aaKnown RBP11.88□□□□□ -0.51
ATF3-207ENST00000464547 SIK1P57059 783 aa11.88□□□□□ -0.51
ATF3-207ENST00000464547 ITPK1Q13572 414 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms