RNA–Protein interactions for RNA: ENST00000464363.5

NELFCD-202, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 764 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-202ENST00000464363 RIC1Q4ADV7 1423 aa22.86■■□□□ 1.25
NELFCD-202ENST00000464363 APAF1O14727 1248 aa22.86■■□□□ 1.25
NELFCD-202ENST00000464363 NTSR2O95665 410 aa22.86■■□□□ 1.25
NELFCD-202ENST00000464363 KRT24Q2M2I5 525 aa22.86■■□□□ 1.25
NELFCD-202ENST00000464363 HDGFL1Q5TGJ6 251 aa22.86■■□□□ 1.25
NELFCD-202ENST00000464363 CC2D2BQ6DHV5 1058 aa22.86■■□□□ 1.25
NELFCD-202ENST00000464363 RBM17Q96I25 401 aaKnown RBP22.86■■□□□ 1.25
NELFCD-202ENST00000464363 HOXA10P31260 410 aaPredicted RBP22.85■■□□□ 1.25
NELFCD-202ENST00000464363 NLRP3Q96P20 1036 aa22.85■■□□□ 1.25
NELFCD-202ENST00000464363 GRIPAP1Q4V328 841 aa22.84■■□□□ 1.25
NELFCD-202ENST00000464363 CHPF2Q9P2E5 772 aa22.84■■□□□ 1.25
NELFCD-202ENST00000464363 DBF4Q9UBU7 674 aaPredicted RBP22.84■■□□□ 1.25
NELFCD-202ENST00000464363 RNF123Q5XPI4 1314 aa22.83■■□□□ 1.25
NELFCD-202ENST00000464363 DICER1Q9UPY3 1922 aaKnown RBP22.83■■□□□ 1.25
NELFCD-202ENST00000464363 OLFM4Q6UX06 510 aa22.83■■□□□ 1.25
NELFCD-202ENST00000464363 CRAMP1Q96RY5 1269 aa22.83■■□□□ 1.25
NELFCD-202ENST00000464363 ZNF277Q9NRM2 450 aaPredicted RBP22.83■■□□□ 1.25
NELFCD-202ENST00000464363 GNAI1P63096 354 aa22.82■■□□□ 1.24
NELFCD-202ENST00000464363 TCIRG1Q13488 830 aa22.82■■□□□ 1.24
NELFCD-202ENST00000464363 SLC10A5Q5PT55 438 aa22.82■■□□□ 1.24
NELFCD-202ENST00000464363 DUSP27Q5VZP5 1158 aa22.82■■□□□ 1.24
NELFCD-202ENST00000464363 SYNE4Q8N205 404 aa22.82■■□□□ 1.24
NELFCD-202ENST00000464363 TMX4Q9H1E5 349 aaPredicted RBP22.82■■□□□ 1.24
NELFCD-202ENST00000464363 MBIPQ9NS73 344 aa22.82■■□□□ 1.24
NELFCD-202ENST00000464363 POTECB2RU33 542 aa22.81■■□□□ 1.24
NELFCD-202ENST00000464363 DDNO94850 711 aaPredicted RBP22.81■■□□□ 1.24
NELFCD-202ENST00000464363 PSMD1Q99460 953 aa22.81■■□□□ 1.24
NELFCD-202ENST00000464363 IFT57Q9NWB7 429 aa22.81■■□□□ 1.24
NELFCD-202ENST00000464363 HYPKQ9NX55 129 aa22.81■■□□□ 1.24
NELFCD-202ENST00000464363 IARSP41252 1262 aaKnown RBP22.8■■□□□ 1.24
NELFCD-202ENST00000464363 ANKRD13DQ6ZTN6 518 aa22.8■■□□□ 1.24
NELFCD-202ENST00000464363 NLRP10Q86W26 655 aa22.8■■□□□ 1.24
NELFCD-202ENST00000464363 TRMT112Q9UI30 125 aaKnown RBP22.8■■□□□ 1.24
NELFCD-202ENST00000464363 WDR90Q96KV7 1748 aa22.79■■□□□ 1.24
NELFCD-202ENST00000464363 IQCA1LA6NCM1 817 aa22.79■■□□□ 1.24
NELFCD-202ENST00000464363 ZNF853P0CG23 659 aa22.79■■□□□ 1.24
NELFCD-202ENST00000464363 PLBD2Q8NHP8 589 aa22.79■■□□□ 1.24
NELFCD-202ENST00000464363 JDP2Q8WYK2 163 aa22.79■■□□□ 1.24
NELFCD-202ENST00000464363 PPEF1O14829 653 aaPredicted RBP22.78■■□□□ 1.24
NELFCD-202ENST00000464363 DNAJC5GQ8N7S2 189 aa22.78■■□□□ 1.24
NELFCD-202ENST00000464363 CHMP4AQ9BY43 222 aa22.78■■□□□ 1.24
NELFCD-202ENST00000464363 C3orf67Q6ZVT6 689 aa22.77■■□□□ 1.24
NELFCD-202ENST00000464363 SH3TC1Q8TE82 1336 aa22.77■■□□□ 1.24
NELFCD-202ENST00000464363 TCERG1O14776 1098 aaKnown RBP22.76■■□□□ 1.23
NELFCD-202ENST00000464363 L3MBTL3Q96JM7 780 aaPredicted RBP22.76■■□□□ 1.23
NELFCD-202ENST00000464363 FZD9O00144 591 aa22.74■■□□□ 1.23
NELFCD-202ENST00000464363 ELL2O00472 640 aaPredicted RBP22.74■■□□□ 1.23
NELFCD-202ENST00000464363 BBOX1O75936 387 aa22.74■■□□□ 1.23
NELFCD-202ENST00000464363 HCLS1P14317 486 aaPredicted RBP22.74■■□□□ 1.23
NELFCD-202ENST00000464363 ZNF316A6NFI3 1004 aaPredicted RBP22.73■■□□□ 1.23
NELFCD-202ENST00000464363 HTRA3P83110 453 aa22.73■■□□□ 1.23
NELFCD-202ENST00000464363 CHADLQ6NUI6 762 aa22.73■■□□□ 1.23
NELFCD-202ENST00000464363 DDX46Q7L014 1031 aaKnown RBP22.73■■□□□ 1.23
NELFCD-202ENST00000464363 ATP6V0A2Q9Y487 856 aa22.73■■□□□ 1.23
NELFCD-202ENST00000464363 ANP32CO43423 234 aa22.72■■□□□ 1.23
NELFCD-202ENST00000464363 EIF6P56537 245 aaKnown RBP22.72■■□□□ 1.23
NELFCD-202ENST00000464363 LARGE2Q8N3Y3 721 aa22.72■■□□□ 1.23
NELFCD-202ENST00000464363 ZNF541Q9H0D2 1346 aa22.72■■□□□ 1.23
NELFCD-202ENST00000464363 ANKRD36CQ5JPF3 1778 aa22.71■■□□□ 1.23
NELFCD-202ENST00000464363 GOLGA2Q08379 1002 aa22.71■■□□□ 1.23
NELFCD-202ENST00000464363 CCDC184Q52MB2 194 aa22.71■■□□□ 1.23
NELFCD-202ENST00000464363 RIC3Q7Z5B4 369 aa22.71■■□□□ 1.23
NELFCD-202ENST00000464363 GPC2Q8N158 579 aa22.71■■□□□ 1.23
NELFCD-202ENST00000464363 KLRG1Q96E93 195 aa22.71■■□□□ 1.23
NELFCD-202ENST00000464363 ISCA1Q9BUE6 129 aa22.71■■□□□ 1.23
NELFCD-202ENST00000464363 HACL1Q9UJ83 578 aa22.71■■□□□ 1.23
NELFCD-202ENST00000464363 ABCC4O15439 1325 aa22.71■■□□□ 1.23
NELFCD-202ENST00000464363 SNED1Q8TER0 1413 aa22.71■■□□□ 1.23
NELFCD-202ENST00000464363 ATP5J2-PTCD1G3V325 749 aa22.7■■□□□ 1.22
NELFCD-202ENST00000464363 SUPT20HQ8NEM7 779 aa22.7■■□□□ 1.22
NELFCD-202ENST00000464363 VPS33BQ9H267 617 aa22.7■■□□□ 1.22
NELFCD-202ENST00000464363 TAF1DQ9H5J8 278 aaPredicted RBP22.7■■□□□ 1.22
NELFCD-202ENST00000464363 TRIM28Q13263 835 aaKnown RBP22.69■■□□□ 1.22
NELFCD-202ENST00000464363 CCDC30Q5VVM6 783 aa22.69■■□□□ 1.22
NELFCD-202ENST00000464363 LDHDQ86WU2 507 aa22.69■■□□□ 1.22
NELFCD-202ENST00000464363 SP8Q8IXZ3 490 aa22.69■■□□□ 1.22
NELFCD-202ENST00000464363 C8orf58Q8NAV2 365 aa22.69■■□□□ 1.22
NELFCD-202ENST00000464363 MRS2Q9HD23 443 aa22.69■■□□□ 1.22
NELFCD-202ENST00000464363 CCDC27Q2M243 656 aa22.68■■□□□ 1.22
NELFCD-202ENST00000464363 PNMA8AQ86V59 439 aaPredicted RBP22.68■■□□□ 1.22
NELFCD-202ENST00000464363 ZNF428Q96B54 188 aa22.68■■□□□ 1.22
NELFCD-202ENST00000464363 FAM89AQ96GI7 184 aa22.68■■□□□ 1.22
NELFCD-202ENST00000464363 SCN4AP35499 1836 aa22.67■■□□□ 1.22
NELFCD-202ENST00000464363 PPIP5K2O43314 1243 aa22.67■■□□□ 1.22
NELFCD-202ENST00000464363 DDX58O95786 925 aaKnown RBP22.67■■□□□ 1.22
NELFCD-202ENST00000464363 GRAPQ13588 217 aa22.67■■□□□ 1.22
NELFCD-202ENST00000464363 EAPPQ56P03 285 aaPredicted RBP22.67■■□□□ 1.22
NELFCD-202ENST00000464363 DPP8Q6V1X1 898 aaPredicted RBP22.67■■□□□ 1.22
NELFCD-202ENST00000464363 TMC4Q7Z404 712 aa22.67■■□□□ 1.22
NELFCD-202ENST00000464363 NIM1KQ8IY84 436 aa22.67■■□□□ 1.22
NELFCD-202ENST00000464363 GRAPLQ8TC17 118 aaPredicted RBP22.67■■□□□ 1.22
NELFCD-202ENST00000464363 PHAXQ9H814 394 aaKnown RBP22.67■■□□□ 1.22
NELFCD-202ENST00000464363 GJA3Q9Y6H8 435 aa22.67■■□□□ 1.22
NELFCD-202ENST00000464363 POTEIP0CG38 1075 aa22.66■■□□□ 1.22
NELFCD-202ENST00000464363 POTEJP0CG39 1038 aa22.66■■□□□ 1.22
NELFCD-202ENST00000464363 HSP90B1P14625 803 aaKnown RBP22.66■■□□□ 1.22
NELFCD-202ENST00000464363 EPHX2P34913 555 aa22.66■■□□□ 1.22
NELFCD-202ENST00000464363 WWC1Q8IX03 1113 aa22.66■■□□□ 1.22
NELFCD-202ENST00000464363 MPNDQ8N594 471 aa22.66■■□□□ 1.22
NELFCD-202ENST00000464363 CLEC11AQ9Y240 323 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms