RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 HSP90AB3PQ58FF7 597 aa17.91■□□□□ 0.46
COL5A1-205ENST00000464187 JARID2Q92833 1246 aaPredicted RBP17.91■□□□□ 0.46
COL5A1-205ENST00000464187 COL15A1P39059 1388 aa17.91■□□□□ 0.46
COL5A1-205ENST00000464187 SRGAP3O43295 1099 aa17.9■□□□□ 0.46
COL5A1-205ENST00000464187 TBC1D9Q6ZT07 1266 aa17.9■□□□□ 0.46
COL5A1-205ENST00000464187 SSH3Q8TE77 659 aa17.9■□□□□ 0.46
COL5A1-205ENST00000464187 LRRC4BQ9NT99 713 aa17.9■□□□□ 0.46
COL5A1-205ENST00000464187 LY75O60449 1722 aa17.89■□□□□ 0.45
COL5A1-205ENST00000464187 RBM25P49756 843 aaKnown RBP17.89■□□□□ 0.45
COL5A1-205ENST00000464187 CASP7P55210 303 aa17.89■□□□□ 0.45
COL5A1-205ENST00000464187 MTX1Q13505 466 aa17.89■□□□□ 0.45
COL5A1-205ENST00000464187 C16orf71Q8IYS4 520 aaPredicted RBP17.89■□□□□ 0.45
COL5A1-205ENST00000464187 BICC1Q9H694 974 aaKnown RBP17.89■□□□□ 0.45
COL5A1-205ENST00000464187 H7C1W4 665 aa17.88■□□□□ 0.45
COL5A1-205ENST00000464187 CAMTA2O94983 1202 aa17.88■□□□□ 0.45
COL5A1-205ENST00000464187 POLA2Q14181 598 aa17.88■□□□□ 0.45
COL5A1-205ENST00000464187 GNPATO15228 680 aa17.88■□□□□ 0.45
COL5A1-205ENST00000464187 GPTP24298 496 aa17.88■□□□□ 0.45
COL5A1-205ENST00000464187 TTC22Q5TAA0 569 aa17.88■□□□□ 0.45
COL5A1-205ENST00000464187 SMARCA5O60264 1052 aaPredicted RBP17.87■□□□□ 0.45
COL5A1-205ENST00000464187 RPS6KA4O75676 772 aa17.87■□□□□ 0.45
COL5A1-205ENST00000464187 SLC27A3Q5K4L6 730 aa17.87■□□□□ 0.45
COL5A1-205ENST00000464187 OTUD7AQ8TE49 926 aaPredicted RBP17.87■□□□□ 0.45
COL5A1-205ENST00000464187 ANTXR1Q9H6X2 564 aa17.87■□□□□ 0.45
COL5A1-205ENST00000464187 EXOC6BQ9Y2D4 811 aa17.87■□□□□ 0.45
COL5A1-205ENST00000464187 AFDNP55196 1824 aaKnown RBP17.87■□□□□ 0.45
COL5A1-205ENST00000464187 CDC45O75419 566 aa17.86■□□□□ 0.45
COL5A1-205ENST00000464187 EPHA10Q5JZY3 1008 aa17.86■□□□□ 0.45
COL5A1-205ENST00000464187 SMIM5Q71RC9 77 aa17.86■□□□□ 0.45
COL5A1-205ENST00000464187 SLKQ9H2G2 1235 aaPredicted RBP17.86■□□□□ 0.45
COL5A1-205ENST00000464187 NLRP10Q86W26 655 aa17.86■□□□□ 0.45
COL5A1-205ENST00000464187 RTCBQ9Y3I0 505 aaKnown RBP17.86■□□□□ 0.45
COL5A1-205ENST00000464187 APBB1O00213 710 aa17.85■□□□□ 0.45
COL5A1-205ENST00000464187 APBA3O96018 575 aa17.85■□□□□ 0.45
COL5A1-205ENST00000464187 ZNF34Q8IZ26 560 aa17.85■□□□□ 0.45
COL5A1-205ENST00000464187 ZBTB38Q8NAP3 1195 aaPredicted RBP17.85■□□□□ 0.45
COL5A1-205ENST00000464187 PLSCR1O15162 318 aa17.84■□□□□ 0.45
COL5A1-205ENST00000464187 TXNRD1Q16881 649 aa17.84■□□□□ 0.45
COL5A1-205ENST00000464187 AMIGO3Q86WK7 504 aa17.84■□□□□ 0.45
COL5A1-205ENST00000464187 AK7Q96M32 723 aa17.84■□□□□ 0.45
COL5A1-205ENST00000464187 BCL11AQ9H165 835 aa17.84■□□□□ 0.45
COL5A1-205ENST00000464187 PCCAP05165 728 aaPredicted RBP17.84■□□□□ 0.45
COL5A1-205ENST00000464187 RABL6Q3YEC7 729 aaPredicted RBP17.84■□□□□ 0.45
COL5A1-205ENST00000464187 PROM2Q8N271 834 aa17.84■□□□□ 0.45
COL5A1-205ENST00000464187 FAM89AQ96GI7 184 aa17.84■□□□□ 0.45
COL5A1-205ENST00000464187 UBN2Q6ZU65 1347 aa17.84■□□□□ 0.45
COL5A1-205ENST00000464187 FRAT2O75474 233 aaPredicted RBP17.83■□□□□ 0.44
COL5A1-205ENST00000464187 SURF6O75683 361 aaKnown RBP17.83■□□□□ 0.44
COL5A1-205ENST00000464187 ZNF652Q9Y2D9 606 aa17.83■□□□□ 0.44
COL5A1-205ENST00000464187 C4BP0C0L5 1744 aa17.83■□□□□ 0.44
COL5A1-205ENST00000464187 FOXO4P98177 505 aa17.82■□□□□ 0.44
COL5A1-205ENST00000464187 CLEC4GQ6UXB4 293 aa17.82■□□□□ 0.44
COL5A1-205ENST00000464187 TAF1LQ8IZX4 1826 aa17.82■□□□□ 0.44
COL5A1-205ENST00000464187 ARHGEF1Q92888 912 aaKnown RBP17.82■□□□□ 0.44
COL5A1-205ENST00000464187 NARFQ9UHQ1 456 aa17.82■□□□□ 0.44
COL5A1-205ENST00000464187 TRMT112Q9UI30 125 aaKnown RBP17.82■□□□□ 0.44
COL5A1-205ENST00000464187 NUP98P52948 1817 aa17.81■□□□□ 0.44
COL5A1-205ENST00000464187 PHF14O94880 888 aa17.81■□□□□ 0.44
COL5A1-205ENST00000464187 LMBR1LQ6UX01 489 aa17.81■□□□□ 0.44
COL5A1-205ENST00000464187 KIF2CQ99661 725 aa17.81■□□□□ 0.44
COL5A1-205ENST00000464187 LRRCC1Q9C099 1032 aa17.81■□□□□ 0.44
COL5A1-205ENST00000464187 NIP7Q9Y221 180 aaKnown RBP eCLIP17.81■□□□□ 0.44
COL5A1-205ENST00000464187 ZPR1O75312 459 aa17.8■□□□□ 0.44
COL5A1-205ENST00000464187 TRAPPC3LQ5T215 181 aa17.8■□□□□ 0.44
COL5A1-205ENST00000464187 HSCBQ8IWL3 235 aa17.8■□□□□ 0.44
COL5A1-205ENST00000464187 SYNE4Q8N205 404 aa17.8■□□□□ 0.44
COL5A1-205ENST00000464187 PA2G4Q9UQ80 394 aaKnown RBP17.8■□□□□ 0.44
COL5A1-205ENST00000464187 RGL2O15211 777 aa17.79■□□□□ 0.44
COL5A1-205ENST00000464187 RAB11FIP3O75154 756 aa17.79■□□□□ 0.44
COL5A1-205ENST00000464187 PARP10Q53GL7 1025 aa17.79■□□□□ 0.44
COL5A1-205ENST00000464187 HSP90AB4PQ58FF6 505 aa17.79■□□□□ 0.44
COL5A1-205ENST00000464187 SUSD4Q5VX71 490 aa17.79■□□□□ 0.44
COL5A1-205ENST00000464187 USPL1Q5W0Q7 1092 aa17.79■□□□□ 0.44
COL5A1-205ENST00000464187 SNX21Q969T3 373 aa17.79■□□□□ 0.44
COL5A1-205ENST00000464187 CDHR2Q9BYE9 1310 aa17.79■□□□□ 0.44
COL5A1-205ENST00000464187 SDSP20132 328 aa17.79■□□□□ 0.44
COL5A1-205ENST00000464187 HMGB2P26583 209 aaKnown RBP17.79■□□□□ 0.44
COL5A1-205ENST00000464187 PLA2G12BQ9BX93 195 aa17.79■□□□□ 0.44
COL5A1-205ENST00000464187 BCL2L12Q9HB09 334 aa17.79■□□□□ 0.44
COL5A1-205ENST00000464187 SRP68Q9UHB9 627 aaKnown RBP17.79■□□□□ 0.44
COL5A1-205ENST00000464187 ANKRD36CQ5JPF3 1778 aa17.79■□□□□ 0.44
COL5A1-205ENST00000464187 SALL3Q9BXA9 1300 aa17.78■□□□□ 0.44
COL5A1-205ENST00000464187 RFC4P35249 363 aa17.78■□□□□ 0.44
COL5A1-205ENST00000464187 SPRYD3Q8NCJ5 442 aa17.78■□□□□ 0.44
COL5A1-205ENST00000464187 KLHDC4Q8TBB5 520 aa17.78■□□□□ 0.44
COL5A1-205ENST00000464187 OSBPL3Q9H4L5 887 aa17.78■□□□□ 0.44
COL5A1-205ENST00000464187 CHMP3Q9Y3E7 222 aa17.78■□□□□ 0.44
COL5A1-205ENST00000464187 AK9Q5TCS8 1911 aa17.77■□□□□ 0.44
COL5A1-205ENST00000464187 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.77■□□□□ 0.44
COL5A1-205ENST00000464187 FAM177BA6PVY3 158 aa17.77■□□□□ 0.44
COL5A1-205ENST00000464187 IRS4O14654 1257 aaPredicted RBP17.77■□□□□ 0.44
COL5A1-205ENST00000464187 ADRA2BP18089 450 aa17.77■□□□□ 0.44
COL5A1-205ENST00000464187 RFX5P48382 616 aaPredicted RBP17.77■□□□□ 0.44
COL5A1-205ENST00000464187 OS9Q13438 667 aaPredicted RBP17.77■□□□□ 0.44
COL5A1-205ENST00000464187 KIF1BPQ96EK5 621 aa17.77■□□□□ 0.44
COL5A1-205ENST00000464187 UTP14AQ9BVJ6 771 aaKnown RBP17.77■□□□□ 0.44
COL5A1-205ENST00000464187 PDE1AP54750 535 aa17.77■□□□□ 0.43
COL5A1-205ENST00000464187 ILDR1Q86SU0 546 aaPredicted RBP17.77■□□□□ 0.43
COL5A1-205ENST00000464187 RHPN1Q8TCX5 695 aa17.77■□□□□ 0.43
COL5A1-205ENST00000464187 BCORQ6W2J9 1755 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms